RNA–Protein interactions for RNA: ENST00000544429.5

DDX55-211, Transcript of DEAD-box helicase 55, humanhuman

TSL 4

Gene DDX55, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-211ENST00000544429 LURAP1LQ8IV03 231 aa16.3■□□□□ 0.2
DDX55-211ENST00000544429 CIARTQ8N365 385 aaPredicted RBP16.3■□□□□ 0.2
DDX55-211ENST00000544429 C10orf105Q8TEF2 133 aa16.3■□□□□ 0.2
DDX55-211ENST00000544429 COX4I2Q96KJ9 171 aa16.3■□□□□ 0.2
DDX55-211ENST00000544429 CNN2Q99439 309 aaKnown RBP16.3■□□□□ 0.2
DDX55-211ENST00000544429 CYSLTR2Q9NS75 346 aa16.3■□□□□ 0.2
DDX55-211ENST00000544429 SMPD3Q9NY59 655 aaPredicted RBP16.3■□□□□ 0.2
DDX55-211ENST00000544429 H2AFY2Q9P0M6 372 aaPredicted RBP16.3■□□□□ 0.2
DDX55-211ENST00000544429 TANC2Q9HCD6 1990 aa16.29■□□□□ 0.2
DDX55-211ENST00000544429 IGHV4-30-2A0A087WSY4 118 aa16.29■□□□□ 0.2
DDX55-211ENST00000544429 LOC100130705A0A1B0GUX0 176 aa16.29■□□□□ 0.2
DDX55-211ENST00000544429 ZSCAN5BA6NJL1 495 aa16.29■□□□□ 0.2
DDX55-211ENST00000544429 NCR1O76036 304 aa16.29■□□□□ 0.2
DDX55-211ENST00000544429 LCATP04180 440 aa16.29■□□□□ 0.2
DDX55-211ENST00000544429 ERCC1P07992 297 aaPredicted RBP16.29■□□□□ 0.2
DDX55-211ENST00000544429 MRPL3P09001 348 aaKnown RBP16.29■□□□□ 0.2
DDX55-211ENST00000544429 SBK2P0C263 348 aa16.29■□□□□ 0.2
DDX55-211ENST00000544429 CD99P14209 185 aa16.29■□□□□ 0.2
DDX55-211ENST00000544429 PRKXP51817 358 aa16.29■□□□□ 0.2
DDX55-211ENST00000544429 GK2Q14410 553 aaPredicted RBP16.29■□□□□ 0.2
DDX55-211ENST00000544429 PCGF3Q3KNV8 242 aa16.29■□□□□ 0.2
DDX55-211ENST00000544429 DEGS2Q6QHC5 323 aa16.29■□□□□ 0.2
DDX55-211ENST00000544429 Q6ZR03 302 aa16.29■□□□□ 0.2
DDX55-211ENST00000544429 SPATC1Q76KD6 591 aa16.29■□□□□ 0.2
DDX55-211ENST00000544429 THEM6Q8WUY1 208 aa16.29■□□□□ 0.2
DDX55-211ENST00000544429 SNX33Q8WV41 574 aa16.29■□□□□ 0.2
DDX55-211ENST00000544429 MNTQ99583 582 aa16.29■□□□□ 0.2
DDX55-211ENST00000544429 IMPAD1Q9NX62 359 aa16.29■□□□□ 0.2
DDX55-211ENST00000544429 PTTG3PQ9NZH4 202 aa16.29■□□□□ 0.2
DDX55-211ENST00000544429 DNAJC27Q9NZQ0 273 aa16.29■□□□□ 0.2
DDX55-211ENST00000544429 COPS3Q9UNS2 423 aa16.29■□□□□ 0.2
DDX55-211ENST00000544429 IQCF6A8MYZ5 107 aa16.28■□□□□ 0.2
DDX55-211ENST00000544429 VWC2LB2RUY7 222 aa16.28■□□□□ 0.2
DDX55-211ENST00000544429 IGHV1-46P01743 117 aa16.28■□□□□ 0.2
DDX55-211ENST00000544429 HPXP02790 462 aa16.28■□□□□ 0.2
DDX55-211ENST00000544429 DAOP14920 347 aa16.28■□□□□ 0.2
DDX55-211ENST00000544429 GIFP27352 417 aa16.28■□□□□ 0.2
DDX55-211ENST00000544429 MAGEB1P43366 347 aa16.28■□□□□ 0.2
DDX55-211ENST00000544429 ZNF81P51508 661 aa16.28■□□□□ 0.2
DDX55-211ENST00000544429 MRPS11P82912 194 aaKnown RBP16.28■□□□□ 0.2
DDX55-211ENST00000544429 CDK5R2Q13319 367 aa16.28■□□□□ 0.2
DDX55-211ENST00000544429 LRRC36Q1X8D7 754 aa16.28■□□□□ 0.2
DDX55-211ENST00000544429 FAM209AQ5JX71 171 aa16.28■□□□□ 0.2
DDX55-211ENST00000544429 MEDAGQ5VYS4 303 aa16.28■□□□□ 0.2
DDX55-211ENST00000544429 CLEC2AQ6UVW9 174 aa16.28■□□□□ 0.2
DDX55-211ENST00000544429 ENTHD1Q8IYW4 607 aa16.28■□□□□ 0.2
DDX55-211ENST00000544429 ZNF786Q8N393 782 aa16.28■□□□□ 0.2
DDX55-211ENST00000544429 RFLNBQ8N5W9 214 aa16.28■□□□□ 0.2
DDX55-211ENST00000544429 RHOXF1Q8NHV9 184 aa16.28■□□□□ 0.2
DDX55-211ENST00000544429 RFKQ969G6 155 aa16.28■□□□□ 0.2
DDX55-211ENST00000544429 SPSB4Q96A44 273 aa16.28■□□□□ 0.2
DDX55-211ENST00000544429 REPIN1Q9BWE0 567 aaKnown RBP16.28■□□□□ 0.2
DDX55-211ENST00000544429 CLN6Q9NWW5 311 aa16.28■□□□□ 0.2
DDX55-211ENST00000544429 NKX1-2Q9UD57 310 aaPredicted RBP16.28■□□□□ 0.2
DDX55-211ENST00000544429 LAMP5Q9UJQ1 280 aa16.28■□□□□ 0.2
DDX55-211ENST00000544429 GMPPBQ9Y5P6 360 aa16.28■□□□□ 0.2
DDX55-211ENST00000544429 TMEM14AQ9Y6G1 99 aa16.28■□□□□ 0.2
DDX55-211ENST00000544429 LOC390937A0A1W2PQ73 354 aa16.27■□□□□ 0.2
DDX55-211ENST00000544429 NDUFS8O00217 210 aa16.27■□□□□ 0.2
DDX55-211ENST00000544429 TIMM8AO60220 97 aaPredicted RBP16.27■□□□□ 0.2
DDX55-211ENST00000544429 APOC1P02654 83 aa16.27■□□□□ 0.2
DDX55-211ENST00000544429 MT-ND5P03915 603 aa16.27■□□□□ 0.2
DDX55-211ENST00000544429 CD55P08174 381 aa16.27■□□□□ 0.2
DDX55-211ENST00000544429 H2BFMP0C1H6 154 aa16.27■□□□□ 0.2
DDX55-211ENST00000544429 DCTDP32321 178 aa16.27■□□□□ 0.2
DDX55-211ENST00000544429 SLC6A9P48067 706 aa16.27■□□□□ 0.2
DDX55-211ENST00000544429 CX3CR1P49238 355 aa16.27■□□□□ 0.2
DDX55-211ENST00000544429 ZNF92Q03936 586 aa16.27■□□□□ 0.2
DDX55-211ENST00000544429 POU4F2Q12837 409 aa16.27■□□□□ 0.2
DDX55-211ENST00000544429 TAF13Q15543 124 aa16.27■□□□□ 0.2
DDX55-211ENST00000544429 LRRN1Q6UXK5 716 aa16.27■□□□□ 0.2
DDX55-211ENST00000544429 UBASH3BQ8TF42 649 aa16.27■□□□□ 0.2
DDX55-211ENST00000544429 ASB17Q8WXJ9 295 aa16.27■□□□□ 0.2
DDX55-211ENST00000544429 FAM168AQ92567 244 aa16.27■□□□□ 0.2
DDX55-211ENST00000544429 C18orf12Q96KH6 178 aa16.27■□□□□ 0.2
DDX55-211ENST00000544429 OR8B4Q96RC9 309 aa16.27■□□□□ 0.2
DDX55-211ENST00000544429 NIPAL2Q9H841 368 aa16.27■□□□□ 0.2
DDX55-211ENST00000544429 ZNF319Q9P2F9 582 aa16.27■□□□□ 0.2
DDX55-211ENST00000544429 ZDHHC8Q9ULC8 765 aa16.27■□□□□ 0.2
DDX55-211ENST00000544429 LRP12Q9Y561 859 aa16.27■□□□□ 0.2
DDX55-211ENST00000544429 PLSCR5A0PG75 271 aa16.26■□□□□ 0.19
DDX55-211ENST00000544429 H7C1Q1 480 aa16.26■□□□□ 0.19
DDX55-211ENST00000544429 J3QRE1 110 aa16.26■□□□□ 0.19
DDX55-211ENST00000544429 ENTPD6O75354 484 aa16.26■□□□□ 0.19
DDX55-211ENST00000544429 RP2O75695 350 aa16.26■□□□□ 0.19
DDX55-211ENST00000544429 SLC2A1P11166 492 aa16.26■□□□□ 0.19
DDX55-211ENST00000544429 HSD11B1P28845 292 aa16.26■□□□□ 0.19
DDX55-211ENST00000544429 PDLIM4P50479 330 aa16.26■□□□□ 0.19
DDX55-211ENST00000544429 ZNF121P58317 390 aaPredicted RBP16.26■□□□□ 0.19
DDX55-211ENST00000544429 PSMA6P60900 246 aaKnown RBP16.26■□□□□ 0.19
DDX55-211ENST00000544429 RIN1Q13671 783 aa16.26■□□□□ 0.19
DDX55-211ENST00000544429 ZMAT1Q5H9K5 638 aa16.26■□□□□ 0.19
DDX55-211ENST00000544429 GLYATL3Q5SZD4 288 aa16.26■□□□□ 0.19
DDX55-211ENST00000544429 OR2T2Q6IF00 324 aa16.26■□□□□ 0.19
DDX55-211ENST00000544429 KCTD18Q6PI47 426 aaPredicted RBP16.26■□□□□ 0.19
DDX55-211ENST00000544429 SLC35F2Q8IXU6 374 aa16.26■□□□□ 0.19
DDX55-211ENST00000544429 ZNF679Q8IYX0 411 aa16.26■□□□□ 0.19
DDX55-211ENST00000544429 GALNT4Q8N4A0 578 aa16.26■□□□□ 0.19
DDX55-211ENST00000544429 ZNF283Q8N7M2 679 aa16.26■□□□□ 0.19
DDX55-211ENST00000544429 OR8G5Q8NG78 346 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms