RNA–Protein interactions for RNA: ENST00000543766.2

VPS13D-212, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 2 BASIC

Gene VPS13D, Length 3,838 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-212ENST00000543766 CGB1A6NKQ9 187 aa7.99□□□□□ -1.13
VPS13D-212ENST00000543766 SLC17A3O00476 420 aa7.99□□□□□ -1.13
VPS13D-212ENST00000543766 CDIPTO14735 213 aa7.99□□□□□ -1.13
VPS13D-212ENST00000543766 HLA-DQB1P01920 261 aa7.99□□□□□ -1.13
VPS13D-212ENST00000543766 OR4A8P0C604 315 aa7.99□□□□□ -1.13
VPS13D-212ENST00000543766 NPY1RP25929 384 aa7.99□□□□□ -1.13
VPS13D-212ENST00000543766 SLC6A1P30531 599 aa7.99□□□□□ -1.13
VPS13D-212ENST00000543766 CTSKP43235 329 aa7.99□□□□□ -1.13
VPS13D-212ENST00000543766 HINT1P49773 126 aaPredicted RBP7.99□□□□□ -1.13
VPS13D-212ENST00000543766 WNT4P56705 351 aa7.99□□□□□ -1.13
VPS13D-212ENST00000543766 UBA52P62987 128 aaKnown RBP7.99□□□□□ -1.13
VPS13D-212ENST00000543766 SAXO2Q658L1 398 aa7.99□□□□□ -1.13
VPS13D-212ENST00000543766 PSAPL1Q6NUJ1 521 aa7.99□□□□□ -1.13
VPS13D-212ENST00000543766 ENPP7Q6UWV6 458 aa7.99□□□□□ -1.13
VPS13D-212ENST00000543766 LINC01551Q86U37 167 aa7.99□□□□□ -1.13
VPS13D-212ENST00000543766 CDC20BQ86Y33 519 aa7.99□□□□□ -1.13
VPS13D-212ENST00000543766 GPD1LQ8N335 351 aa7.99□□□□□ -1.13
VPS13D-212ENST00000543766 OR52E4Q8NGH9 312 aa7.99□□□□□ -1.13
VPS13D-212ENST00000543766 FAM131CQ96AQ9 280 aa7.99□□□□□ -1.13
VPS13D-212ENST00000543766 CTHRC1Q96CG8 243 aa7.99□□□□□ -1.13
VPS13D-212ENST00000543766 C12orf42Q96LP6 360 aa7.99□□□□□ -1.13
VPS13D-212ENST00000543766 RTP3Q9BQQ7 232 aa7.99□□□□□ -1.13
VPS13D-212ENST00000543766 MAP1LC3B2A6NCE7 125 aa7.99□□□□□ -1.13
VPS13D-212ENST00000543766 F5H5K5 113 aa7.99□□□□□ -1.13
VPS13D-212ENST00000543766 TDGF1P13385 188 aa7.99□□□□□ -1.13
VPS13D-212ENST00000543766 FOLR2P14207 255 aa7.99□□□□□ -1.13
VPS13D-212ENST00000543766 MMP9P14780 707 aa7.99□□□□□ -1.13
VPS13D-212ENST00000543766 DAP3P51398 398 aaKnown RBP7.99□□□□□ -1.13
VPS13D-212ENST00000543766 TIRAPP58753 221 aa7.99□□□□□ -1.13
VPS13D-212ENST00000543766 ANXA2RQ3ZCQ2 193 aa7.99□□□□□ -1.13
VPS13D-212ENST00000543766 EIF5AL1Q6IS14 154 aaKnown RBP7.99□□□□□ -1.13
VPS13D-212ENST00000543766 ZNF343Q6P1L6 599 aa7.99□□□□□ -1.13
VPS13D-212ENST00000543766 INO80CQ6PI98 192 aaPredicted RBP7.99□□□□□ -1.13
VPS13D-212ENST00000543766 LIN28BQ6ZN17 250 aaKnown RBP eCLIP7.99□□□□□ -1.13
VPS13D-212ENST00000543766 FCAMRQ8WWV6 532 aa7.99□□□□□ -1.13
VPS13D-212ENST00000543766 CNOT9Q92600 299 aaKnown RBP7.99□□□□□ -1.13
VPS13D-212ENST00000543766 ZFP3Q96NJ6 502 aa7.99□□□□□ -1.13
VPS13D-212ENST00000543766 NRSN2Q9GZP1 204 aa7.99□□□□□ -1.13
VPS13D-212ENST00000543766 MAP1LC3BQ9GZQ8 125 aa7.99□□□□□ -1.13
VPS13D-212ENST00000543766 ELOVL3Q9HB03 270 aa7.99□□□□□ -1.13
VPS13D-212ENST00000543766 AMBNQ9NP70 447 aa7.99□□□□□ -1.13
VPS13D-212ENST00000543766 CLN8Q9UBY8 286 aa7.99□□□□□ -1.13
VPS13D-212ENST00000543766 HHLA2Q9UM44 414 aa7.99□□□□□ -1.13
VPS13D-212ENST00000543766 PKIGQ9Y2B9 76 aa7.99□□□□□ -1.13
VPS13D-212ENST00000543766 STYXL1Q9Y6J8 313 aa7.99□□□□□ -1.13
VPS13D-212ENST00000543766 GAGE12BA1L429 117 aa7.99□□□□□ -1.13
VPS13D-212ENST00000543766 PLA2G10O15496 165 aa7.99□□□□□ -1.13
VPS13D-212ENST00000543766 FAM20BO75063 409 aa7.99□□□□□ -1.13
VPS13D-212ENST00000543766 STBD1O95210 358 aa7.99□□□□□ -1.13
VPS13D-212ENST00000543766 SOD3P08294 240 aa7.99□□□□□ -1.13
VPS13D-212ENST00000543766 GGT1P19440 569 aa7.99□□□□□ -1.13
VPS13D-212ENST00000543766 EMP1P54849 157 aa7.99□□□□□ -1.13
VPS13D-212ENST00000543766 SNU13P55769 128 aaKnown RBP7.99□□□□□ -1.13
VPS13D-212ENST00000543766 IL13RA1P78552 427 aa7.99□□□□□ -1.13
VPS13D-212ENST00000543766 ST3GAL3Q11203 375 aa7.99□□□□□ -1.13
VPS13D-212ENST00000543766 MLLT11Q13015 90 aaPredicted RBP7.99□□□□□ -1.13
VPS13D-212ENST00000543766 MELKQ14680 651 aa7.99□□□□□ -1.13
VPS13D-212ENST00000543766 RAB6CQ53S08 254 aa7.99□□□□□ -1.13
VPS13D-212ENST00000543766 SLC5A8Q8N695 610 aa7.99□□□□□ -1.13
VPS13D-212ENST00000543766 OR4N2Q8NGD1 307 aa7.99□□□□□ -1.13
VPS13D-212ENST00000543766 ANAPC13Q9BS18 74 aa7.99□□□□□ -1.13
VPS13D-212ENST00000543766 RAB6CQ9H0N0 254 aa7.99□□□□□ -1.13
VPS13D-212ENST00000543766 SDR39U1Q9NRG7 319 aaPredicted RBP7.99□□□□□ -1.13
VPS13D-212ENST00000543766 OSER1Q9NX31 292 aa7.99□□□□□ -1.13
VPS13D-212ENST00000543766 TMEM161AQ9NX61 479 aa7.99□□□□□ -1.13
VPS13D-212ENST00000543766 VPREB3Q9UKI3 123 aa7.99□□□□□ -1.13
VPS13D-212ENST00000543766 PAM16Q9Y3D7 125 aa7.99□□□□□ -1.13
VPS13D-212ENST00000543766 TMEM229AB2RXF0 380 aa7.98□□□□□ -1.13
VPS13D-212ENST00000543766 ANKRD28O15084 1053 aa7.98□□□□□ -1.13
VPS13D-212ENST00000543766 HPRT1P00492 218 aa7.98□□□□□ -1.13
VPS13D-212ENST00000543766 EGR1P18146 543 aa7.98□□□□□ -1.13
VPS13D-212ENST00000543766 ZNF83P51522 516 aa7.98□□□□□ -1.13
VPS13D-212ENST00000543766 CTBP2P56545 445 aa7.98□□□□□ -1.13
VPS13D-212ENST00000543766 EIF5AP63241 154 aaKnown RBP7.98□□□□□ -1.13
VPS13D-212ENST00000543766 SLC25A53Q5H9E4 307 aa7.98□□□□□ -1.13
VPS13D-212ENST00000543766 WDR82Q6UXN9 313 aa7.98□□□□□ -1.13
VPS13D-212ENST00000543766 FBXO16Q8IX29 292 aaPredicted RBP7.98□□□□□ -1.13
VPS13D-212ENST00000543766 BMPERQ8N8U9 685 aa7.98□□□□□ -1.13
VPS13D-212ENST00000543766 PNPLA1Q8N8W4 532 aa7.98□□□□□ -1.13
VPS13D-212ENST00000543766 DUSP18Q8NEJ0 188 aa7.98□□□□□ -1.13
VPS13D-212ENST00000543766 PRAP1Q96NZ9 151 aa7.98□□□□□ -1.13
VPS13D-212ENST00000543766 SEPHS2Q99611 448 aa7.98□□□□□ -1.13
VPS13D-212ENST00000543766 TMEM38BQ9NVV0 291 aa7.98□□□□□ -1.13
VPS13D-212ENST00000543766 TSC2P49815 1807 aa7.98□□□□□ -1.13
VPS13D-212ENST00000543766 DNAH12Q6ZR08 3092 aa7.98□□□□□ -1.13
VPS13D-212ENST00000543766 EEDO75530 441 aaKnown RBP7.98□□□□□ -1.13
VPS13D-212ENST00000543766 GZMBP10144 247 aa7.98□□□□□ -1.13
VPS13D-212ENST00000543766 RHEBQ15382 184 aa7.98□□□□□ -1.13
VPS13D-212ENST00000543766 RABL3Q5HYI8 236 aa7.98□□□□□ -1.13
VPS13D-212ENST00000543766 TEX38Q6PEX7 206 aa7.98□□□□□ -1.13
VPS13D-212ENST00000543766 TMEM251Q8N6I4 163 aa7.98□□□□□ -1.13
VPS13D-212ENST00000543766 OR5B3Q8NH48 314 aa7.98□□□□□ -1.13
VPS13D-212ENST00000543766 RAB40CQ96S21 281 aa7.98□□□□□ -1.13
VPS13D-212ENST00000543766 FAIM2Q9BWQ8 316 aa7.98□□□□□ -1.13
VPS13D-212ENST00000543766 MS4A8Q9BY19 250 aa7.98□□□□□ -1.13
VPS13D-212ENST00000543766 LAT2Q9GZY6 243 aa7.98□□□□□ -1.13
VPS13D-212ENST00000543766 RETNQ9HD89 108 aa7.98□□□□□ -1.13
VPS13D-212ENST00000543766 TM7SF3Q9NS93 570 aa7.98□□□□□ -1.13
VPS13D-212ENST00000543766 RCE1Q9Y256 329 aa7.98□□□□□ -1.13
VPS13D-212ENST00000543766 MEMO1Q9Y316 297 aa7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms