RNA–Protein interactions for RNA: ENST00000542002.5

YBX3-212, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 952 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-212ENST00000542002 M0R135 149 aa8.25□□□□□ -1.09
YBX3-212ENST00000542002 PRODHO43272 600 aa8.25□□□□□ -1.09
YBX3-212ENST00000542002 CD5LO43866 347 aa8.25□□□□□ -1.09
YBX3-212ENST00000542002 ALPLP05186 524 aa8.25□□□□□ -1.09
YBX3-212ENST00000542002 ADH4P08319 380 aa8.25□□□□□ -1.09
YBX3-212ENST00000542002 TACSTD2P09758 323 aa8.25□□□□□ -1.09
YBX3-212ENST00000542002 PAICSP22234 425 aaKnown RBP8.25□□□□□ -1.09
YBX3-212ENST00000542002 OPRL1P41146 370 aa8.25□□□□□ -1.09
YBX3-212ENST00000542002 NAA10P41227 235 aaPredicted RBP8.25□□□□□ -1.09
YBX3-212ENST00000542002 RGS6P49758 472 aa8.25□□□□□ -1.09
YBX3-212ENST00000542002 BLVRAP53004 296 aa8.25□□□□□ -1.09
YBX3-212ENST00000542002 TPTEP56180 551 aa8.25□□□□□ -1.09
YBX3-212ENST00000542002 TMEM33P57088 247 aa8.25□□□□□ -1.09
YBX3-212ENST00000542002 MRPS11P82912 194 aaKnown RBP8.25□□□□□ -1.09
YBX3-212ENST00000542002 ZNF92Q03936 586 aa8.25□□□□□ -1.09
YBX3-212ENST00000542002 PCGF3Q3KNV8 242 aa8.25□□□□□ -1.09
YBX3-212ENST00000542002 USP51Q70EK9 711 aa8.25□□□□□ -1.09
YBX3-212ENST00000542002 PRSS45Q7RTY3 260 aa8.25□□□□□ -1.09
YBX3-212ENST00000542002 TCEANCQ8N8B7 351 aa8.25□□□□□ -1.09
YBX3-212ENST00000542002 OR2Z1Q8NG97 314 aa8.25□□□□□ -1.09
YBX3-212ENST00000542002 OR6N2Q8NGY6 317 aa8.25□□□□□ -1.09
YBX3-212ENST00000542002 OR2AE1Q8NHA4 323 aa8.25□□□□□ -1.09
YBX3-212ENST00000542002 OTOSQ8NHW6 89 aa8.25□□□□□ -1.09
YBX3-212ENST00000542002 SNX33Q8WV41 574 aa8.25□□□□□ -1.09
YBX3-212ENST00000542002 KCTD12Q96CX2 325 aaKnown RBP8.25□□□□□ -1.09
YBX3-212ENST00000542002 ZNF799Q96GE5 643 aa8.25□□□□□ -1.09
YBX3-212ENST00000542002 IL4I1Q96RQ9 567 aa8.25□□□□□ -1.09
YBX3-212ENST00000542002 KCNJ15Q99712 375 aa8.25□□□□□ -1.09
YBX3-212ENST00000542002 SLC29A1Q99808 456 aa8.25□□□□□ -1.09
YBX3-212ENST00000542002 COPS4Q9BT78 406 aa8.25□□□□□ -1.09
YBX3-212ENST00000542002 CHODLQ9H9P2 273 aa8.25□□□□□ -1.09
YBX3-212ENST00000542002 DECR2Q9NUI1 292 aa8.25□□□□□ -1.09
YBX3-212ENST00000542002 N6AMT1Q9Y5N5 214 aa8.25□□□□□ -1.09
YBX3-212ENST00000542002 CSPG4Q6UVK1 2322 aa8.25□□□□□ -1.09
YBX3-212ENST00000542002 IGHV1-69-2A0A0G2JMI3 117 aa8.24□□□□□ -1.09
YBX3-212ENST00000542002 A0A1B0GWJ7 208 aa8.24□□□□□ -1.09
YBX3-212ENST00000542002 PLSCR5A0PG75 271 aa8.24□□□□□ -1.09
YBX3-212ENST00000542002 ANKRD65E5RJM6 399 aa8.24□□□□□ -1.09
YBX3-212ENST00000542002 J3QW42 95 aa8.24□□□□□ -1.09
YBX3-212ENST00000542002 MLNRO43193 412 aa8.24□□□□□ -1.09
YBX3-212ENST00000542002 HLA-DPB1P04440 258 aa8.24□□□□□ -1.09
YBX3-212ENST00000542002 CD55P08174 381 aa8.24□□□□□ -1.09
YBX3-212ENST00000542002 MRPL3P09001 348 aaKnown RBP8.24□□□□□ -1.09
YBX3-212ENST00000542002 ALOX5APP20292 161 aa8.24□□□□□ -1.09
YBX3-212ENST00000542002 ACHEP22303 614 aa8.24□□□□□ -1.09
YBX3-212ENST00000542002 IGFBP5P24593 272 aa8.24□□□□□ -1.09
YBX3-212ENST00000542002 LIPAP38571 399 aa8.24□□□□□ -1.09
YBX3-212ENST00000542002 SLC35D3Q5M8T2 416 aa8.24□□□□□ -1.09
YBX3-212ENST00000542002 GLYATL3Q5SZD4 288 aa8.24□□□□□ -1.09
YBX3-212ENST00000542002 AVPI1Q5T686 147 aa8.24□□□□□ -1.09
YBX3-212ENST00000542002 ZFP1Q6P2D0 407 aa8.24□□□□□ -1.09
YBX3-212ENST00000542002 DRAM2Q6UX65 266 aa8.24□□□□□ -1.09
YBX3-212ENST00000542002 MEPCEQ7L2J0 689 aaKnown RBP8.24□□□□□ -1.09
YBX3-212ENST00000542002 CBR4Q8N4T8 237 aa8.24□□□□□ -1.09
YBX3-212ENST00000542002 RFLNBQ8N5W9 214 aa8.24□□□□□ -1.09
YBX3-212ENST00000542002 ZNF540Q8NDQ6 660 aa8.24□□□□□ -1.09
YBX3-212ENST00000542002 BHLHE23Q8NDY6 225 aa8.24□□□□□ -1.09
YBX3-212ENST00000542002 OR8G5Q8NG78 346 aa8.24□□□□□ -1.09
YBX3-212ENST00000542002 OR5L1Q8NGL2 311 aa8.24□□□□□ -1.09
YBX3-212ENST00000542002 TMEM163Q8TC26 289 aa8.24□□□□□ -1.09
YBX3-212ENST00000542002 THEM6Q8WUY1 208 aa8.24□□□□□ -1.09
YBX3-212ENST00000542002 CCL17Q92583 94 aa8.24□□□□□ -1.09
YBX3-212ENST00000542002 SPTSSAQ969W0 71 aa8.24□□□□□ -1.09
YBX3-212ENST00000542002 SGK3Q96BR1 496 aa8.24□□□□□ -1.09
YBX3-212ENST00000542002 MSI2Q96DH6 328 aaKnown RBP8.24□□□□□ -1.09
YBX3-212ENST00000542002 POM121Q96HA1 1249 aa8.24□□□□□ -1.09
YBX3-212ENST00000542002 PLEKHA8Q96JA3 519 aa8.24□□□□□ -1.09
YBX3-212ENST00000542002 COG8Q96MW5 612 aa8.24□□□□□ -1.09
YBX3-212ENST00000542002 SLC30A2Q9BRI3 323 aa8.24□□□□□ -1.09
YBX3-212ENST00000542002 REPIN1Q9BWE0 567 aaKnown RBP8.24□□□□□ -1.09
YBX3-212ENST00000542002 GABARAPL3Q9BY60 117 aa8.24□□□□□ -1.09
YBX3-212ENST00000542002 RIBC2Q9H4K1 309 aa8.24□□□□□ -1.09
YBX3-212ENST00000542002 PPP1R3EQ9H7J1 279 aa8.24□□□□□ -1.09
YBX3-212ENST00000542002 CYSLTR2Q9NS75 346 aa8.24□□□□□ -1.09
YBX3-212ENST00000542002 ZDHHC8Q9ULC8 765 aa8.24□□□□□ -1.09
YBX3-212ENST00000542002 COPS3Q9UNS2 423 aa8.24□□□□□ -1.09
YBX3-212ENST00000542002 SETD2Q9BYW2 2564 aaPredicted RBP8.24□□□□□ -1.09
YBX3-212ENST00000542002 CR1P17927 2039 aa8.24□□□□□ -1.09
YBX3-212ENST00000542002 IGHV3-64DA0A0J9YX35 117 aa8.23□□□□□ -1.09
YBX3-212ENST00000542002 IQCF6A8MYZ5 107 aa8.23□□□□□ -1.09
YBX3-212ENST00000542002 ZNF878C9JN71 531 aa8.23□□□□□ -1.09
YBX3-212ENST00000542002 PSMD9O00233 223 aa8.23□□□□□ -1.09
YBX3-212ENST00000542002 EI24O14681 340 aa8.23□□□□□ -1.09
YBX3-212ENST00000542002 MAGEB4O15481 346 aaPredicted RBP8.23□□□□□ -1.09
YBX3-212ENST00000542002 TPD52L2O43399 206 aaKnown RBP8.23□□□□□ -1.09
YBX3-212ENST00000542002 PPIHO43447 177 aaKnown RBP8.23□□□□□ -1.09
YBX3-212ENST00000542002 MT-ND5P03915 603 aa8.23□□□□□ -1.09
YBX3-212ENST00000542002 SELEP16581 610 aa8.23□□□□□ -1.09
YBX3-212ENST00000542002 PMELP40967 661 aa8.23□□□□□ -1.09
YBX3-212ENST00000542002 SLC6A9P48067 706 aa8.23□□□□□ -1.09
YBX3-212ENST00000542002 CX3CR1P49238 355 aa8.23□□□□□ -1.09
YBX3-212ENST00000542002 ZNF121P58317 390 aaPredicted RBP8.23□□□□□ -1.09
YBX3-212ENST00000542002 LMO4P61968 165 aa8.23□□□□□ -1.09
YBX3-212ENST00000542002 RPS7P62081 194 aaKnown RBP8.23□□□□□ -1.09
YBX3-212ENST00000542002 TNFAIP6P98066 277 aaPredicted RBP8.23□□□□□ -1.09
YBX3-212ENST00000542002 TAF13Q15543 124 aa8.23□□□□□ -1.09
YBX3-212ENST00000542002 ZIK1Q3SY52 487 aaPredicted RBP8.23□□□□□ -1.09
YBX3-212ENST00000542002 FAM209AQ5JX71 171 aa8.23□□□□□ -1.09
YBX3-212ENST00000542002 C6orf52Q5T4I8 152 aa8.23□□□□□ -1.09
YBX3-212ENST00000542002 CYB5R2Q6BCY4 276 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms