RNA–Protein interactions for RNA: ENST00000541122.6

SMARCA4-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS P4 TSL 5 BASIC

Gene SMARCA4, Length 5,139 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-207ENST00000541122 RBMXL3Q8N7X1 1067 aaKnown RBP13.59□□□□□ -0.23
SMARCA4-207ENST00000541122 SLC35G3Q8N808 338 aa13.59□□□□□ -0.23
SMARCA4-207ENST00000541122 SLC35B3Q9H1N7 401 aa13.59□□□□□ -0.23
SMARCA4-207ENST00000541122 DNMT3BQ9UBC3 853 aaKnown RBP13.59□□□□□ -0.23
SMARCA4-207ENST00000541122 ANKRD20A5PA0PJZ0 165 aa13.58□□□□□ -0.23
SMARCA4-207ENST00000541122 TNFRSF4P43489 277 aa13.58□□□□□ -0.23
SMARCA4-207ENST00000541122 BCORP1Q8N888 145 aa13.58□□□□□ -0.23
SMARCA4-207ENST00000541122 NXF2Q9GZY0 626 aaKnown RBP13.58□□□□□ -0.23
SMARCA4-207ENST00000541122 GABRA1P14867 456 aa13.58□□□□□ -0.24
SMARCA4-207ENST00000541122 MIDNQ504T8 468 aa13.58□□□□□ -0.24
SMARCA4-207ENST00000541122 CACFD1Q9UGQ2 172 aa13.58□□□□□ -0.24
SMARCA4-207ENST00000541122 ANKRD61A6NGH8 418 aa13.58□□□□□ -0.24
SMARCA4-207ENST00000541122 C4orf47A7E2U8 309 aa13.58□□□□□ -0.24
SMARCA4-207ENST00000541122 SDCBPO00560 298 aaPredicted RBP13.58□□□□□ -0.24
SMARCA4-207ENST00000541122 SLC25A1P53007 311 aa13.58□□□□□ -0.24
SMARCA4-207ENST00000541122 DEFB133Q30KQ1 61 aa13.58□□□□□ -0.24
SMARCA4-207ENST00000541122 H2BFWTQ7Z2G1 175 aa13.58□□□□□ -0.24
SMARCA4-207ENST00000541122 ADIPOR2Q86V24 386 aa13.58□□□□□ -0.24
SMARCA4-207ENST00000541122 RTN4IP1Q8WWV3 396 aaPredicted RBP13.58□□□□□ -0.24
SMARCA4-207ENST00000541122 RPUSD4Q96CM3 377 aaKnown RBP13.58□□□□□ -0.24
SMARCA4-207ENST00000541122 CIB3Q96Q77 187 aaPredicted RBP13.58□□□□□ -0.24
SMARCA4-207ENST00000541122 PTRH2Q9Y3E5 179 aaKnown RBP13.58□□□□□ -0.24
SMARCA4-207ENST00000541122 PLSCR5A0PG75 271 aa13.58□□□□□ -0.24
SMARCA4-207ENST00000541122 CLDN34H7C241 214 aa13.58□□□□□ -0.24
SMARCA4-207ENST00000541122 VAMP5O95183 116 aa13.58□□□□□ -0.24
SMARCA4-207ENST00000541122 ABHD16AO95870 558 aa13.58□□□□□ -0.24
SMARCA4-207ENST00000541122 PNPP00491 289 aa13.58□□□□□ -0.24
SMARCA4-207ENST00000541122 FABP4P15090 132 aa13.58□□□□□ -0.24
SMARCA4-207ENST00000541122 CD22P20273 847 aa13.58□□□□□ -0.24
SMARCA4-207ENST00000541122 C21orf58P58505 322 aa13.58□□□□□ -0.24
SMARCA4-207ENST00000541122 CD81P60033 236 aa13.58□□□□□ -0.24
SMARCA4-207ENST00000541122 ELAVL1Q15717 326 aaKnown RBP13.58□□□□□ -0.24
SMARCA4-207ENST00000541122 TIGITQ495A1 244 aa13.58□□□□□ -0.24
SMARCA4-207ENST00000541122 IGSF11Q5DX21 431 aa13.58□□□□□ -0.24
SMARCA4-207ENST00000541122 THNSL2Q86YJ6 484 aa13.58□□□□□ -0.24
SMARCA4-207ENST00000541122 NECAP1Q8NC96 275 aa13.58□□□□□ -0.24
SMARCA4-207ENST00000541122 PINX1Q96BK5 328 aaKnown RBP13.58□□□□□ -0.24
SMARCA4-207ENST00000541122 SLCO1B1Q9Y6L6 691 aa13.58□□□□□ -0.24
SMARCA4-207ENST00000541122 CCDC187A0A096LP49 1063 aa13.57□□□□□ -0.24
SMARCA4-207ENST00000541122 TMEM218A2RU14 115 aa13.57□□□□□ -0.24
SMARCA4-207ENST00000541122 FIGNL2A6NMB9 653 aa13.57□□□□□ -0.24
SMARCA4-207ENST00000541122 MBTPS2O43462 519 aa13.57□□□□□ -0.24
SMARCA4-207ENST00000541122 DHRS2Q13268 280 aa13.57□□□□□ -0.24
SMARCA4-207ENST00000541122 VWA2Q5GFL6 755 aa13.57□□□□□ -0.24
SMARCA4-207ENST00000541122 SHISA6Q6ZSJ9 500 aa13.57□□□□□ -0.24
SMARCA4-207ENST00000541122 MRPL43Q8N983 215 aaKnown RBP13.57□□□□□ -0.24
SMARCA4-207ENST00000541122 SLC39A7Q92504 469 aa13.57□□□□□ -0.24
SMARCA4-207ENST00000541122 PIGQQ9BRB3 760 aa13.57□□□□□ -0.24
SMARCA4-207ENST00000541122 MMP7P09237 267 aaPredicted RBP13.57□□□□□ -0.24
SMARCA4-207ENST00000541122 ENPP1P22413 925 aa13.57□□□□□ -0.24
SMARCA4-207ENST00000541122 PIGPP57054 158 aa13.57□□□□□ -0.24
SMARCA4-207ENST00000541122 LINC00615Q96LM1 132 aaPredicted RBP13.57□□□□□ -0.24
SMARCA4-207ENST00000541122 NUDT9Q9BW91 350 aa13.57□□□□□ -0.24
SMARCA4-207ENST00000541122 SPINT2O43291 252 aa13.57□□□□□ -0.24
SMARCA4-207ENST00000541122 COTL1Q14019 142 aa13.57□□□□□ -0.24
SMARCA4-207ENST00000541122 FAHD2BQ6P2I3 314 aaPredicted RBP13.57□□□□□ -0.24
SMARCA4-207ENST00000541122 MAML2Q8IZL2 1156 aaPredicted RBP13.57□□□□□ -0.24
SMARCA4-207ENST00000541122 OR10P1Q8NGE3 313 aa13.57□□□□□ -0.24
SMARCA4-207ENST00000541122 FAHD2AQ96GK7 314 aa13.57□□□□□ -0.24
SMARCA4-207ENST00000541122 CHRDL1Q9BU40 450 aa13.57□□□□□ -0.24
SMARCA4-207ENST00000541122 LIN7CQ9NUP9 197 aaKnown RBP13.57□□□□□ -0.24
SMARCA4-207ENST00000541122 COL16A1Q07092 1604 aaPredicted RBP13.57□□□□□ -0.24
SMARCA4-207ENST00000541122 A0A1W2PPQ1 181 aa13.57□□□□□ -0.24
SMARCA4-207ENST00000541122 HSPB6O14558 160 aa13.57□□□□□ -0.24
SMARCA4-207ENST00000541122 MRPS21P82921 87 aaKnown RBP13.57□□□□□ -0.24
SMARCA4-207ENST00000541122 GUCA2AQ02747 115 aa13.57□□□□□ -0.24
SMARCA4-207ENST00000541122 SLC38A6Q8IZM9 456 aa13.57□□□□□ -0.24
SMARCA4-207ENST00000541122 INTS12Q96CB8 462 aaKnown RBP13.57□□□□□ -0.24
SMARCA4-207ENST00000541122 ZNF845Q96IR2 970 aaPredicted RBP13.57□□□□□ -0.24
SMARCA4-207ENST00000541122 VAMP8Q9BV40 100 aa13.57□□□□□ -0.24
SMARCA4-207ENST00000541122 TINAGL1Q9GZM7 467 aaPredicted RBP13.57□□□□□ -0.24
SMARCA4-207ENST00000541122 PBOV1Q9GZY1 135 aa13.57□□□□□ -0.24
SMARCA4-207ENST00000541122 ZDHHC11Q9H8X9 412 aa13.57□□□□□ -0.24
SMARCA4-207ENST00000541122 SLCO1C1Q9NYB5 712 aa13.57□□□□□ -0.24
SMARCA4-207ENST00000541122 SLC22A13Q9Y226 551 aa13.57□□□□□ -0.24
SMARCA4-207ENST00000541122 OR5K3A6NET4 321 aa13.56□□□□□ -0.24
SMARCA4-207ENST00000541122 PRAMEF25A6NGN4 478 aa13.56□□□□□ -0.24
SMARCA4-207ENST00000541122 TNFRSF10CO14798 259 aa13.56□□□□□ -0.24
SMARCA4-207ENST00000541122 TRAF3IP2O43734 574 aaPredicted RBP13.56□□□□□ -0.24
SMARCA4-207ENST00000541122 AVPR2P30518 371 aa13.56□□□□□ -0.24
SMARCA4-207ENST00000541122 TAS2R45P59539 299 aa13.56□□□□□ -0.24
SMARCA4-207ENST00000541122 OR51H1Q8NH63 302 aa13.56□□□□□ -0.24
SMARCA4-207ENST00000541122 MRPL38Q96DV4 380 aaKnown RBP13.56□□□□□ -0.24
SMARCA4-207ENST00000541122 SOX7Q9BT81 388 aa13.56□□□□□ -0.24
SMARCA4-207ENST00000541122 SEC11CQ9BY50 192 aa13.56□□□□□ -0.24
SMARCA4-207ENST00000541122 THAP10Q9P2Z0 257 aaPredicted RBP13.56□□□□□ -0.24
SMARCA4-207ENST00000541122 CTSFQ9UBX1 484 aa13.56□□□□□ -0.24
SMARCA4-207ENST00000541122 STRCP1A6NGW2 1772 aa13.56□□□□□ -0.24
SMARCA4-207ENST00000541122 NHSL1Q5SYE7 1610 aa13.56□□□□□ -0.24
SMARCA4-207ENST00000541122 K7EQM0 130 aa13.56□□□□□ -0.24
SMARCA4-207ENST00000541122 NXPH3O95157 252 aa13.56□□□□□ -0.24
SMARCA4-207ENST00000541122 HMGA1P17096 107 aaKnown RBP13.56□□□□□ -0.24
SMARCA4-207ENST00000541122 IRF3Q14653 427 aa13.56□□□□□ -0.24
SMARCA4-207ENST00000541122 PRSS54Q6PEW0 395 aa13.56□□□□□ -0.24
SMARCA4-207ENST00000541122 SLC24A4Q8NFF2 622 aa13.56□□□□□ -0.24
SMARCA4-207ENST00000541122 FAM3CQ92520 227 aa13.56□□□□□ -0.24
SMARCA4-207ENST00000541122 GPR137Q96N19 417 aa13.56□□□□□ -0.24
SMARCA4-207ENST00000541122 MAP3K3Q99759 626 aa13.56□□□□□ -0.24
SMARCA4-207ENST00000541122 RIMS4Q9H426 269 aaPredicted RBP13.56□□□□□ -0.24
SMARCA4-207ENST00000541122 NSG1A0A0A6YYJ2 146 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms