RNA–Protein interactions for RNA: ENST00000538239.5

LRP6-203, Transcript of LDL receptor related protein 6, humanhuman

TSL 1 (best)

Gene LRP6, Length 7,812 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP6-203ENST00000538239 OR52H1Q8NGJ2 320 aa4.82□□□□□ -1.64
LRP6-203ENST00000538239 MAFIPQ8WZ33 124 aa4.82□□□□□ -1.64
LRP6-203ENST00000538239 SLC39A7Q92504 469 aa4.82□□□□□ -1.64
LRP6-203ENST00000538239 TSNAXQ99598 290 aaKnown RBP4.82□□□□□ -1.64
LRP6-203ENST00000538239 A4GNTQ9UNA3 340 aa4.82□□□□□ -1.64
LRP6-203ENST00000538239 B9D1Q9UPM9 204 aa4.82□□□□□ -1.64
LRP6-203ENST00000538239 CEPT1Q9Y6K0 416 aa4.82□□□□□ -1.64
LRP6-203ENST00000538239 FITM1A5D6W6 292 aa4.82□□□□□ -1.64
LRP6-203ENST00000538239 MED6O75586 246 aa4.82□□□□□ -1.64
LRP6-203ENST00000538239 CD3EP07766 207 aa4.82□□□□□ -1.64
LRP6-203ENST00000538239 FMODQ06828 376 aa4.82□□□□□ -1.64
LRP6-203ENST00000538239 GPNMBQ14956 572 aa4.82□□□□□ -1.64
LRP6-203ENST00000538239 SLC25A26Q70HW3 274 aa4.82□□□□□ -1.64
LRP6-203ENST00000538239 CMTM4Q8IZR5 234 aa4.82□□□□□ -1.64
LRP6-203ENST00000538239 OR4C3Q8NH37 302 aa4.82□□□□□ -1.64
LRP6-203ENST00000538239 SUN5Q8TC36 379 aa4.82□□□□□ -1.64
LRP6-203ENST00000538239 DAZAP1Q96EP5 407 aaKnown RBP4.82□□□□□ -1.64
LRP6-203ENST00000538239 SAT2Q96F10 170 aaPredicted RBP4.82□□□□□ -1.64
LRP6-203ENST00000538239 LOXL4Q96JB6 756 aa4.82□□□□□ -1.64
LRP6-203ENST00000538239 MEX3AA1L020 520 aaKnown RBP4.82□□□□□ -1.64
LRP6-203ENST00000538239 E9PI62 339 aa4.82□□□□□ -1.64
LRP6-203ENST00000538239 AIPO00170 330 aa4.82□□□□□ -1.64
LRP6-203ENST00000538239 PRAF2O60831 178 aa4.82□□□□□ -1.64
LRP6-203ENST00000538239 PTTG1O95997 202 aa4.82□□□□□ -1.64
LRP6-203ENST00000538239 APEX1P27695 318 aaKnown RBP4.82□□□□□ -1.64
LRP6-203ENST00000538239 SRD5A2P31213 254 aa4.82□□□□□ -1.64
LRP6-203ENST00000538239 GNG10P50151 68 aa4.82□□□□□ -1.64
LRP6-203ENST00000538239 PRAMEF5Q5TYX0 476 aa4.82□□□□□ -1.64
LRP6-203ENST00000538239 PRAMEF6Q5VXH4 476 aa4.82□□□□□ -1.64
LRP6-203ENST00000538239 OR2T2Q6IF00 324 aa4.82□□□□□ -1.64
LRP6-203ENST00000538239 SEC22AQ96IW7 307 aa4.82□□□□□ -1.64
LRP6-203ENST00000538239 PILRBQ9UKJ0 227 aa4.82□□□□□ -1.64
LRP6-203ENST00000538239 CT45A6P0DMU7 189 aa4.82□□□□□ -1.64
LRP6-203ENST00000538239 CT45A5P0DMU8 189 aa4.82□□□□□ -1.64
LRP6-203ENST00000538239 CT45A7P0DMV0 189 aa4.82□□□□□ -1.64
LRP6-203ENST00000538239 CT45A8P0DMV1 189 aa4.82□□□□□ -1.64
LRP6-203ENST00000538239 CT45A9P0DMV2 189 aa4.82□□□□□ -1.64
LRP6-203ENST00000538239 GABRA1P14867 456 aa4.82□□□□□ -1.64
LRP6-203ENST00000538239 FAHP16930 419 aa4.82□□□□□ -1.64
LRP6-203ENST00000538239 UCNP55089 124 aa4.82□□□□□ -1.64
LRP6-203ENST00000538239 SORDQ00796 357 aa4.82□□□□□ -1.64
LRP6-203ENST00000538239 AQP6Q13520 282 aa4.82□□□□□ -1.64
LRP6-203ENST00000538239 RBMS2Q15434 407 aaKnown RBP4.82□□□□□ -1.64
LRP6-203ENST00000538239 CT45A2Q5DJT8 189 aa4.82□□□□□ -1.64
LRP6-203ENST00000538239 CT45A1Q5HYN5 189 aa4.82□□□□□ -1.64
LRP6-203ENST00000538239 STEAP1BQ6NZ63 245 aa4.82□□□□□ -1.64
LRP6-203ENST00000538239 NANOGP1Q8N7R0 232 aa4.82□□□□□ -1.64
LRP6-203ENST00000538239 CT45A3Q8NHU0 189 aa4.82□□□□□ -1.64
LRP6-203ENST00000538239 PAQR8Q8TEZ7 354 aa4.82□□□□□ -1.64
LRP6-203ENST00000538239 APOBEC3DQ96AK3 386 aaPredicted RBP4.82□□□□□ -1.64
LRP6-203ENST00000538239 PLPPR2Q96GM1 343 aa4.82□□□□□ -1.64
LRP6-203ENST00000538239 RASL10BQ96S79 203 aa4.82□□□□□ -1.64
LRP6-203ENST00000538239 C7orf50Q9BRJ6 194 aaKnown RBP4.82□□□□□ -1.64
LRP6-203ENST00000538239 POFUT1Q9H488 388 aa4.82□□□□□ -1.64
LRP6-203ENST00000538239 RNF150Q9ULK6 438 aa4.82□□□□□ -1.64
LRP6-203ENST00000538239 MDFIC2A0A1B0GVS7 189 aa4.82□□□□□ -1.64
LRP6-203ENST00000538239 TUBAL3A6NHL2 446 aa4.82□□□□□ -1.64
LRP6-203ENST00000538239 NKX2-2O95096 273 aa4.82□□□□□ -1.64
LRP6-203ENST00000538239 TNFRSF1AP19438 455 aa4.82□□□□□ -1.64
LRP6-203ENST00000538239 SPINK2P20155 84 aa4.82□□□□□ -1.64
LRP6-203ENST00000538239 LUMP51884 338 aaPredicted RBP4.82□□□□□ -1.64
LRP6-203ENST00000538239 DOC2BQ14184 412 aa4.82□□□□□ -1.64
LRP6-203ENST00000538239 SLC17A1Q14916 467 aa4.82□□□□□ -1.64
LRP6-203ENST00000538239 SMIM21Q3B7S5 101 aa4.82□□□□□ -1.64
LRP6-203ENST00000538239 KRBOX4Q5JUW0 171 aa4.82□□□□□ -1.64
LRP6-203ENST00000538239 PINX1Q96BK5 328 aaKnown RBP4.82□□□□□ -1.64
LRP6-203ENST00000538239 FYTTD1Q96QD9 318 aaKnown RBP4.82□□□□□ -1.64
LRP6-203ENST00000538239 ARHGDIGQ99819 225 aa4.82□□□□□ -1.64
LRP6-203ENST00000538239 FBXO7Q9Y3I1 522 aa4.82□□□□□ -1.64
LRP6-203ENST00000538239 CA6P23280 308 aa4.82□□□□□ -1.64
LRP6-203ENST00000538239 NFYAP23511 347 aaPredicted RBP4.82□□□□□ -1.64
LRP6-203ENST00000538239 RAC1P63000 192 aa4.82□□□□□ -1.64
LRP6-203ENST00000538239 MRGPREQ86SM8 312 aa4.82□□□□□ -1.64
LRP6-203ENST00000538239 FAM109AQ8N4B1 249 aa4.82□□□□□ -1.64
LRP6-203ENST00000538239 RHOXF1Q8NHV9 184 aa4.82□□□□□ -1.64
LRP6-203ENST00000538239 MFFQ9GZY8 342 aa4.82□□□□□ -1.64
LRP6-203ENST00000538239 RNF32Q9H0A6 362 aa4.82□□□□□ -1.64
LRP6-203ENST00000538239 PLEKHF2Q9H8W4 249 aa4.82□□□□□ -1.64
LRP6-203ENST00000538239 ISG20L2Q9H9L3 353 aaKnown RBP4.82□□□□□ -1.64
LRP6-203ENST00000538239 DNAJB12Q9NXW2 375 aaKnown RBP4.82□□□□□ -1.64
LRP6-203ENST00000538239 PARP14Q460N5 1801 aa4.82□□□□□ -1.64
LRP6-203ENST00000538239 ZNF816-ZNF321PA0A0X1KG74 233 aa4.81□□□□□ -1.64
LRP6-203ENST00000538239 A8MXE2 369 aa4.81□□□□□ -1.64
LRP6-203ENST00000538239 TERTO14746 1132 aaKnown RBP4.81□□□□□ -1.64
LRP6-203ENST00000538239 NKX2-8O15522 239 aa4.81□□□□□ -1.64
LRP6-203ENST00000538239 PATE4P0C8F1 98 aa4.81□□□□□ -1.64
LRP6-203ENST00000538239 AADACP22760 399 aa4.81□□□□□ -1.64
LRP6-203ENST00000538239 ALDH3B2P48448 385 aa4.81□□□□□ -1.64
LRP6-203ENST00000538239 MC2RQ01718 297 aa4.81□□□□□ -1.64
LRP6-203ENST00000538239 ZNF774Q6NX45 483 aa4.81□□□□□ -1.64
LRP6-203ENST00000538239 PDZD9Q8IXQ8 264 aa4.81□□□□□ -1.64
LRP6-203ENST00000538239 RBMXL1Q96E39 390 aaKnown RBP4.81□□□□□ -1.64
LRP6-203ENST00000538239 SIGLEC11Q96RL6 698 aa4.81□□□□□ -1.64
LRP6-203ENST00000538239 RAB1BQ9H0U4 201 aa4.81□□□□□ -1.64
LRP6-203ENST00000538239 SERTM1A2A2V5 107 aa4.81□□□□□ -1.64
LRP6-203ENST00000538239 CCL3P10147 92 aa4.81□□□□□ -1.64
LRP6-203ENST00000538239 FCARP24071 287 aa4.81□□□□□ -1.64
LRP6-203ENST00000538239 UBE2IP63279 158 aaKnown RBP4.81□□□□□ -1.64
LRP6-203ENST00000538239 HTD2P86397 168 aa4.81□□□□□ -1.64
LRP6-203ENST00000538239 TNFAIP6P98066 277 aaPredicted RBP4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms