RNA–Protein interactions for RNA: ENST00000534442.5

ECHDC1-223, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-223ENST00000534442 DHRS7Q9Y394 339 aa3.41□□□□□ -1.86
ECHDC1-223ENST00000534442 EXOSC1Q9Y3B2 195 aaKnown RBP3.41□□□□□ -1.86
ECHDC1-223ENST00000534442 ZNF816-ZNF321PA0A0X1KG74 233 aa3.4□□□□□ -1.87
ECHDC1-223ENST00000534442 FOXI3A8MTJ6 420 aaPredicted RBP3.4□□□□□ -1.87
ECHDC1-223ENST00000534442 KRTAP16-1A8MUX0 517 aa3.4□□□□□ -1.87
ECHDC1-223ENST00000534442 EMC8O43402 210 aa3.4□□□□□ -1.87
ECHDC1-223ENST00000534442 TBX19O60806 448 aa3.4□□□□□ -1.87
ECHDC1-223ENST00000534442 AP2A1O95782 977 aa3.4□□□□□ -1.87
ECHDC1-223ENST00000534442 NUDT14O95848 222 aa3.4□□□□□ -1.87
ECHDC1-223ENST00000534442 ACTL6AO96019 429 aa3.4□□□□□ -1.87
ECHDC1-223ENST00000534442 C1QAP02745 245 aa3.4□□□□□ -1.87
ECHDC1-223ENST00000534442 PRG2P13727 222 aa3.4□□□□□ -1.87
ECHDC1-223ENST00000534442 FASP25445 335 aa3.4□□□□□ -1.87
ECHDC1-223ENST00000534442 GCKP35557 465 aa3.4□□□□□ -1.87
ECHDC1-223ENST00000534442 PRLHRP49683 370 aa3.4□□□□□ -1.87
ECHDC1-223ENST00000534442 EIF2B1Q14232 305 aaKnown RBP3.4□□□□□ -1.87
ECHDC1-223ENST00000534442 TSC22D1Q15714 1073 aa3.4□□□□□ -1.87
ECHDC1-223ENST00000534442 UBE2V2Q15819 145 aa3.4□□□□□ -1.87
ECHDC1-223ENST00000534442 TMEM44Q2T9K0 475 aa3.4□□□□□ -1.87
ECHDC1-223ENST00000534442 GLIPR1L2Q4G1C9 344 aa3.4□□□□□ -1.87
ECHDC1-223ENST00000534442 FAM182AQ5T1J6 154 aa3.4□□□□□ -1.87
ECHDC1-223ENST00000534442 Q5VSD8 79 aa3.4□□□□□ -1.87
ECHDC1-223ENST00000534442 REP15Q6BDI9 236 aa3.4□□□□□ -1.87
ECHDC1-223ENST00000534442 SCYL2Q6P3W7 929 aa3.4□□□□□ -1.87
ECHDC1-223ENST00000534442 OPN5Q6U736 354 aa3.4□□□□□ -1.87
ECHDC1-223ENST00000534442 CYS1Q717R9 158 aa3.4□□□□□ -1.87
ECHDC1-223ENST00000534442 LINC01555Q8NAE3 123 aa3.4□□□□□ -1.87
ECHDC1-223ENST00000534442 ZSCAN4Q8NAM6 433 aaPredicted RBP3.4□□□□□ -1.87
ECHDC1-223ENST00000534442 TMEM35BQ8NCS4 154 aa3.4□□□□□ -1.87
ECHDC1-223ENST00000534442 B3GNT7Q8NFL0 401 aa3.4□□□□□ -1.87
ECHDC1-223ENST00000534442 OR4Q3Q8NH05 313 aa3.4□□□□□ -1.87
ECHDC1-223ENST00000534442 RERGQ96A58 199 aaPredicted RBP3.4□□□□□ -1.87
ECHDC1-223ENST00000534442 TIMD4Q96H15 378 aa3.4□□□□□ -1.87
ECHDC1-223ENST00000534442 VPS37BQ9H9H4 285 aa3.4□□□□□ -1.87
ECHDC1-223ENST00000534442 SMOXQ9NWM0 555 aa3.4□□□□□ -1.87
ECHDC1-223ENST00000534442 UTP6Q9NYH9 597 aaKnown RBP3.4□□□□□ -1.87
ECHDC1-223ENST00000534442 DNAJC12Q9UKB3 198 aa3.4□□□□□ -1.87
ECHDC1-223ENST00000534442 SMC3Q9UQE7 1217 aa3.4□□□□□ -1.87
ECHDC1-223ENST00000534442 GLYATL1P3A0A0U1RQE8 302 aa3.39□□□□□ -1.87
ECHDC1-223ENST00000534442 H3BQV1 296 aa3.39□□□□□ -1.87
ECHDC1-223ENST00000534442 GFYI3L273 518 aa3.39□□□□□ -1.87
ECHDC1-223ENST00000534442 WWP2O00308 870 aa3.39□□□□□ -1.87
ECHDC1-223ENST00000534442 CETN3O15182 167 aa3.39□□□□□ -1.87
ECHDC1-223ENST00000534442 HPNP05981 417 aa3.39□□□□□ -1.87
ECHDC1-223ENST00000534442 MELTFP08582 738 aa3.39□□□□□ -1.87
ECHDC1-223ENST00000534442 PIRTP0C851 137 aa3.39□□□□□ -1.87
ECHDC1-223ENST00000534442 RALBP11234 206 aa3.39□□□□□ -1.87
ECHDC1-223ENST00000534442 HSD17B1P14061 328 aa3.39□□□□□ -1.87
ECHDC1-223ENST00000534442 ATP6V1C1P21283 382 aa3.39□□□□□ -1.87
ECHDC1-223ENST00000534442 DEKP35659 375 aaKnown RBP3.39□□□□□ -1.87
ECHDC1-223ENST00000534442 HMGCLP35914 325 aa3.39□□□□□ -1.87
ECHDC1-223ENST00000534442 RFX3P48380 749 aa3.39□□□□□ -1.87
ECHDC1-223ENST00000534442 CDK9P50750 372 aaKnown RBP3.39□□□□□ -1.87
ECHDC1-223ENST00000534442 LMO4P61968 165 aa3.39□□□□□ -1.87
ECHDC1-223ENST00000534442 CYLC2Q14093 348 aaPredicted RBP3.39□□□□□ -1.87
ECHDC1-223ENST00000534442 PDK4Q16654 411 aa3.39□□□□□ -1.87
ECHDC1-223ENST00000534442 ZNF658BQ4V348 819 aaPredicted RBP3.39□□□□□ -1.87
ECHDC1-223ENST00000534442 CEP85LQ5SZL2 805 aa3.39□□□□□ -1.87
ECHDC1-223ENST00000534442 OTUD3Q5T2D3 398 aaPredicted RBP3.39□□□□□ -1.87
ECHDC1-223ENST00000534442 PRAMEF20Q5VT98 475 aa3.39□□□□□ -1.87
ECHDC1-223ENST00000534442 ACSM5Q6NUN0 579 aa3.39□□□□□ -1.87
ECHDC1-223ENST00000534442 ZNF544Q6NX49 715 aa3.39□□□□□ -1.87
ECHDC1-223ENST00000534442 FAAP20Q6NZ36 180 aa3.39□□□□□ -1.87
ECHDC1-223ENST00000534442 FAM151BQ6UXP7 276 aa3.39□□□□□ -1.87
ECHDC1-223ENST00000534442 ZNF677Q86XU0 584 aa3.39□□□□□ -1.87
ECHDC1-223ENST00000534442 ATPAF2Q8N5M1 289 aa3.39□□□□□ -1.87
ECHDC1-223ENST00000534442 C2orf73Q8N5S3 287 aaPredicted RBP3.39□□□□□ -1.87
ECHDC1-223ENST00000534442 STEAP2Q8NFT2 490 aa3.39□□□□□ -1.87
ECHDC1-223ENST00000534442 OR2L8Q8NGY9 312 aa3.39□□□□□ -1.87
ECHDC1-223ENST00000534442 FNDC8Q8TC99 324 aa3.39□□□□□ -1.87
ECHDC1-223ENST00000534442 NAT14Q8WUY8 206 aa3.39□□□□□ -1.87
ECHDC1-223ENST00000534442 POP5Q969H6 163 aaKnown RBP3.39□□□□□ -1.87
ECHDC1-223ENST00000534442 DCUN1D1Q96GG9 259 aa3.39□□□□□ -1.87
ECHDC1-223ENST00000534442 COMMD4Q9H0A8 199 aa3.39□□□□□ -1.87
ECHDC1-223ENST00000534442 SLC25A51Q9H1U9 297 aa3.39□□□□□ -1.87
ECHDC1-223ENST00000534442 HEXA-AS1Q9H8Q6 139 aa3.39□□□□□ -1.87
ECHDC1-223ENST00000534442 GNB4Q9HAV0 340 aa3.39□□□□□ -1.87
ECHDC1-223ENST00000534442 MEPEQ9NQ76 525 aaPredicted RBP3.39□□□□□ -1.87
ECHDC1-223ENST00000534442 RSPH14Q9UHP6 348 aa3.39□□□□□ -1.87
ECHDC1-223ENST00000534442 PTBP2Q9UKA9 531 aaKnown RBP3.39□□□□□ -1.87
ECHDC1-223ENST00000534442 RNF24Q9Y225 148 aa3.39□□□□□ -1.87
ECHDC1-223ENST00000534442 IKBKGQ9Y6K9 419 aa3.39□□□□□ -1.87
ECHDC1-223ENST00000534442 SSPOA2VEC9 5147 aa3.38□□□□□ -1.87
ECHDC1-223ENST00000534442 SLC22A20A6NK97 555 aa3.38□□□□□ -1.87
ECHDC1-223ENST00000534442 A8MUA0 341 aa3.38□□□□□ -1.87
ECHDC1-223ENST00000534442 C11orf98E9PRG8 122 aa3.38□□□□□ -1.87
ECHDC1-223ENST00000534442 LYNX1G3V0Z9 82 aa3.38□□□□□ -1.87
ECHDC1-223ENST00000534442 PPIHO43447 177 aaKnown RBP3.38□□□□□ -1.87
ECHDC1-223ENST00000534442 OR1F1O43749 312 aa3.38□□□□□ -1.87
ECHDC1-223ENST00000534442 EFNA2O43921 213 aa3.38□□□□□ -1.87
ECHDC1-223ENST00000534442 RENP00797 406 aa3.38□□□□□ -1.87
ECHDC1-223ENST00000534442 LYNX1P0DP58 116 aa3.38□□□□□ -1.87
ECHDC1-223ENST00000534442 ANXA3P12429 323 aa3.38□□□□□ -1.87
ECHDC1-223ENST00000534442 PSMB1P20618 241 aaKnown RBP3.38□□□□□ -1.87
ECHDC1-223ENST00000534442 CDH5P33151 784 aaPredicted RBP3.38□□□□□ -1.87
ECHDC1-223ENST00000534442 CHI3L2Q15782 390 aa3.38□□□□□ -1.87
ECHDC1-223ENST00000534442 DEFB112Q30KQ8 113 aa3.38□□□□□ -1.87
ECHDC1-223ENST00000534442 EIPR1Q53HC9 387 aa3.38□□□□□ -1.87
ECHDC1-223ENST00000534442 CYBRD1Q53TN4 286 aa3.38□□□□□ -1.87
ECHDC1-223ENST00000534442 ZNF506Q5JVG8 444 aa3.38□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms