RNA–Protein interactions for RNA: ENST00000526430.1

NEDD8-204, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 3

Gene NEDD8, Length 286 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-204ENST00000526430 CENPAP49450 140 aa9.32□□□□□ -0.92
NEDD8-204ENST00000526430 CDC42P60953 191 aa9.32□□□□□ -0.92
NEDD8-204ENST00000526430 AQP6Q13520 282 aa9.32□□□□□ -0.92
NEDD8-204ENST00000526430 MAD2L1BPQ15013 274 aaPredicted RBP9.32□□□□□ -0.92
NEDD8-204ENST00000526430 CARTPTQ16568 116 aa9.32□□□□□ -0.92
NEDD8-204ENST00000526430 SMN1Q16637 294 aaKnown RBP9.32□□□□□ -0.92
NEDD8-204ENST00000526430 MST1LQ2TV78 715 aa9.32□□□□□ -0.92
NEDD8-204ENST00000526430 SLC36A2Q495M3 483 aa9.32□□□□□ -0.92
NEDD8-204ENST00000526430 KLHL12Q53G59 568 aa9.32□□□□□ -0.92
NEDD8-204ENST00000526430 DPY19L4Q7Z388 723 aa9.32□□□□□ -0.92
NEDD8-204ENST00000526430 ZSCAN2Q7Z7L9 614 aaPredicted RBP9.32□□□□□ -0.92
NEDD8-204ENST00000526430 NAA40Q86UY6 237 aa9.32□□□□□ -0.92
NEDD8-204ENST00000526430 TEX29Q8N6K0 151 aa9.32□□□□□ -0.92
NEDD8-204ENST00000526430 OR6K6Q8NGW6 343 aa9.32□□□□□ -0.92
NEDD8-204ENST00000526430 SLC7A6Q92536 515 aa9.32□□□□□ -0.92
NEDD8-204ENST00000526430 RNF166Q96A37 237 aaPredicted RBP9.32□□□□□ -0.92
NEDD8-204ENST00000526430 OTULINQ96BN8 352 aa9.32□□□□□ -0.92
NEDD8-204ENST00000526430 ZNF649Q9BS31 505 aa9.32□□□□□ -0.92
NEDD8-204ENST00000526430 SUCNR1Q9BXA5 334 aa9.32□□□□□ -0.92
NEDD8-204ENST00000526430 COPS3Q9UNS2 423 aa9.32□□□□□ -0.92
NEDD8-204ENST00000526430 PCDHGB5Q9Y5G0 923 aa9.32□□□□□ -0.92
NEDD8-204ENST00000526430 ORC6Q9Y5N6 252 aa9.32□□□□□ -0.92
NEDD8-204ENST00000526430 C5orf63A6NC05 138 aa9.31□□□□□ -0.92
NEDD8-204ENST00000526430 C12orf71A8MTZ7 269 aa9.31□□□□□ -0.92
NEDD8-204ENST00000526430 B4DSR2 109 aa9.31□□□□□ -0.92
NEDD8-204ENST00000526430 ATP6V1G2-DDX39BF2Z307 99 aa9.31□□□□□ -0.92
NEDD8-204ENST00000526430 DBHP09172 617 aa9.31□□□□□ -0.92
NEDD8-204ENST00000526430 SBK2P0C263 348 aa9.31□□□□□ -0.92
NEDD8-204ENST00000526430 EPHA1P21709 976 aa9.31□□□□□ -0.92
NEDD8-204ENST00000526430 PAICSP22234 425 aaKnown RBP9.31□□□□□ -0.92
NEDD8-204ENST00000526430 PAX7P23759 505 aa9.31□□□□□ -0.92
NEDD8-204ENST00000526430 HTR1FP30939 366 aa9.31□□□□□ -0.92
NEDD8-204ENST00000526430 SLC15A1P46059 708 aa9.31□□□□□ -0.92
NEDD8-204ENST00000526430 CAPZA2P47755 286 aa9.31□□□□□ -0.92
NEDD8-204ENST00000526430 ENTPD1P49961 510 aa9.31□□□□□ -0.92
NEDD8-204ENST00000526430 BLVRAP53004 296 aa9.31□□□□□ -0.92
NEDD8-204ENST00000526430 TMEM255AQ5JRV8 349 aa9.31□□□□□ -0.92
NEDD8-204ENST00000526430 ZNF684Q5T5D7 378 aa9.31□□□□□ -0.92
NEDD8-204ENST00000526430 TTC23Q5W5X9 447 aa9.31□□□□□ -0.92
NEDD8-204ENST00000526430 OTOSQ8NHW6 89 aa9.31□□□□□ -0.92
NEDD8-204ENST00000526430 PLEKHA8Q96JA3 519 aa9.31□□□□□ -0.92
NEDD8-204ENST00000526430 ABHD6Q9BV23 337 aa9.31□□□□□ -0.92
NEDD8-204ENST00000526430 TEX12Q9BXU0 123 aa9.31□□□□□ -0.92
NEDD8-204ENST00000526430 RNF121Q9H920 327 aa9.31□□□□□ -0.92
NEDD8-204ENST00000526430 MRPS18AQ9NVS2 196 aaKnown RBP9.31□□□□□ -0.92
NEDD8-204ENST00000526430 KCNG2Q9UJ96 466 aa9.31□□□□□ -0.92
NEDD8-204ENST00000526430 MAGEB4O15481 346 aaPredicted RBP9.3□□□□□ -0.92
NEDD8-204ENST00000526430 SGCEO43556 437 aa9.3□□□□□ -0.92
NEDD8-204ENST00000526430 ICMTO60725 284 aa9.3□□□□□ -0.92
NEDD8-204ENST00000526430 APOL3O95236 402 aa9.3□□□□□ -0.92
NEDD8-204ENST00000526430 NGFP01138 241 aa9.3□□□□□ -0.92
NEDD8-204ENST00000526430 HLA-DQA2P01906 255 aa9.3□□□□□ -0.92
NEDD8-204ENST00000526430 MRPL3P09001 348 aaKnown RBP9.3□□□□□ -0.92
NEDD8-204ENST00000526430 COX5BP10606 129 aa9.3□□□□□ -0.92
NEDD8-204ENST00000526430 STOMP27105 288 aa9.3□□□□□ -0.92
NEDD8-204ENST00000526430 OTX1P32242 354 aaPredicted RBP9.3□□□□□ -0.92
NEDD8-204ENST00000526430 NAA10P41227 235 aaPredicted RBP9.3□□□□□ -0.92
NEDD8-204ENST00000526430 PCBD1P61457 104 aa9.3□□□□□ -0.92
NEDD8-204ENST00000526430 SNRPD2P62316 118 aaKnown RBP9.3□□□□□ -0.92
NEDD8-204ENST00000526430 CDK5R2Q13319 367 aa9.3□□□□□ -0.92
NEDD8-204ENST00000526430 IL18R1Q13478 541 aa9.3□□□□□ -0.92
NEDD8-204ENST00000526430 ELFN2Q5R3F8 820 aa9.3□□□□□ -0.92
NEDD8-204ENST00000526430 TMEM53Q6P2H8 277 aa9.3□□□□□ -0.92
NEDD8-204ENST00000526430 IZUMO2Q6UXV1 221 aa9.3□□□□□ -0.92
NEDD8-204ENST00000526430 COLCA1Q6ZS62 124 aa9.3□□□□□ -0.92
NEDD8-204ENST00000526430 SSX6Q7RTT6 188 aa9.3□□□□□ -0.92
NEDD8-204ENST00000526430 SLC16A9Q7RTY1 509 aa9.3□□□□□ -0.92
NEDD8-204ENST00000526430 PRSS45Q7RTY3 260 aa9.3□□□□□ -0.92
NEDD8-204ENST00000526430 DCXRQ7Z4W1 244 aa9.3□□□□□ -0.92
NEDD8-204ENST00000526430 ERI1Q8IV48 349 aaKnown RBP9.3□□□□□ -0.92
NEDD8-204ENST00000526430 ZNF101Q8IZC7 436 aa9.3□□□□□ -0.92
NEDD8-204ENST00000526430 ZDHHC22Q8N966 263 aa9.3□□□□□ -0.92
NEDD8-204ENST00000526430 SLC30A7Q8NEW0 376 aa9.3□□□□□ -0.92
NEDD8-204ENST00000526430 GJC3Q8NFK1 279 aa9.3□□□□□ -0.92
NEDD8-204ENST00000526430 OR1F12Q8NHA8 337 aa9.3□□□□□ -0.92
NEDD8-204ENST00000526430 CNIH3Q8TBE1 160 aa9.3□□□□□ -0.92
NEDD8-204ENST00000526430 CYGBQ8WWM9 190 aa9.3□□□□□ -0.92
NEDD8-204ENST00000526430 INTS14Q96SY0 518 aa9.3□□□□□ -0.92
NEDD8-204ENST00000526430 SLITRK2Q9H156 845 aa9.3□□□□□ -0.92
NEDD8-204ENST00000526430 AMBNQ9NP70 447 aa9.3□□□□□ -0.92
NEDD8-204ENST00000526430 CCNB1IP1Q9NPC3 277 aa9.3□□□□□ -0.92
NEDD8-204ENST00000526430 ESM1Q9NQ30 184 aa9.3□□□□□ -0.92
NEDD8-204ENST00000526430 DDX28Q9NUL7 540 aaKnown RBP9.3□□□□□ -0.92
NEDD8-204ENST00000526430 WARS2Q9UGM6 360 aaKnown RBP9.3□□□□□ -0.92
NEDD8-204ENST00000526430 EXOGQ9Y2C4 368 aaKnown RBP9.3□□□□□ -0.92
NEDD8-204ENST00000526430 GRIP1Q9Y3R0 1128 aa9.3□□□□□ -0.92
NEDD8-204ENST00000526430 TMEM129A0AVI4 362 aa9.29□□□□□ -0.92
NEDD8-204ENST00000526430 SLC22A31A6NKX4 558 aa9.29□□□□□ -0.92
NEDD8-204ENST00000526430 POM121CA8CG34 1229 aa9.29□□□□□ -0.92
NEDD8-204ENST00000526430 RAB36O95755 333 aa9.29□□□□□ -0.92
NEDD8-204ENST00000526430 SPARCP09486 303 aa9.29□□□□□ -0.92
NEDD8-204ENST00000526430 ZNF823P16415 610 aa9.29□□□□□ -0.92
NEDD8-204ENST00000526430 NR4A1P22736 598 aa9.29□□□□□ -0.92
NEDD8-204ENST00000526430 VHLP40337 213 aa9.29□□□□□ -0.92
NEDD8-204ENST00000526430 GUCA1AP43080 201 aaPredicted RBP9.29□□□□□ -0.92
NEDD8-204ENST00000526430 ERVS71-1P61550 626 aa9.29□□□□□ -0.92
NEDD8-204ENST00000526430 UBA52P62987 128 aaKnown RBP9.29□□□□□ -0.92
NEDD8-204ENST00000526430 MVKQ03426 396 aa9.29□□□□□ -0.92
NEDD8-204ENST00000526430 ZNF85Q03923 595 aa9.29□□□□□ -0.92
NEDD8-204ENST00000526430 SCRN3Q0VDG4 424 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms