RNA–Protein interactions for RNA: ENST00000523540.1

PCM1-219, Transcript of pericentriolar material 1, humanhuman

TSL 2

Gene PCM1, Length 640 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-219ENST00000523540 C21orf59P57076 290 aa2.31□□□□□ -2.04
PCM1-219ENST00000523540 DGCR6Q14129 220 aa2.31□□□□□ -2.04
PCM1-219ENST00000523540 C12orf54Q6X4T0 127 aa2.31□□□□□ -2.04
PCM1-219ENST00000523540 CBR4Q8N4T8 237 aa2.31□□□□□ -2.04
PCM1-219ENST00000523540 TTLQ8NG68 377 aa2.31□□□□□ -2.04
PCM1-219ENST00000523540 OR6Q1Q8NGQ2 317 aa2.31□□□□□ -2.04
PCM1-219ENST00000523540 N4BP2L2Q92802 583 aaPredicted RBP2.31□□□□□ -2.04
PCM1-219ENST00000523540 NRBF2Q96F24 287 aa2.31□□□□□ -2.04
PCM1-219ENST00000523540 PANX1Q96RD7 426 aa2.31□□□□□ -2.04
PCM1-219ENST00000523540 CHP1Q99653 195 aa2.31□□□□□ -2.04
PCM1-219ENST00000523540 RSG1Q9BU20 258 aa2.31□□□□□ -2.04
PCM1-219ENST00000523540 SLC17A7Q9P2U7 560 aa2.31□□□□□ -2.04
PCM1-219ENST00000523540 GABRR3A8MPY1 467 aa2.3□□□□□ -2.04
PCM1-219ENST00000523540 PDZK1P1A8MUH7 402 aa2.3□□□□□ -2.04
PCM1-219ENST00000523540 CD160O95971 181 aa2.3□□□□□ -2.04
PCM1-219ENST00000523540 AGTP01019 485 aa2.3□□□□□ -2.04
PCM1-219ENST00000523540 CD37P11049 281 aa2.3□□□□□ -2.04
PCM1-219ENST00000523540 CSNK2A2P19784 350 aaPredicted RBP2.3□□□□□ -2.04
PCM1-219ENST00000523540 GTF2E2P29084 291 aaKnown RBP2.3□□□□□ -2.04
PCM1-219ENST00000523540 RGS8P57771 180 aaPredicted RBP2.3□□□□□ -2.04
PCM1-219ENST00000523540 ZNF266Q14584 549 aa2.3□□□□□ -2.04
PCM1-219ENST00000523540 IGFBP7Q16270 282 aa2.3□□□□□ -2.04
PCM1-219ENST00000523540 TPTE2P1Q5T6R2 138 aa2.3□□□□□ -2.04
PCM1-219ENST00000523540 H3F3CQ6NXT2 135 aa2.3□□□□□ -2.04
PCM1-219ENST00000523540 METAP1DQ6UB28 335 aaPredicted RBP2.3□□□□□ -2.04
PCM1-219ENST00000523540 SPANXA2-OT1Q8N9U9 137 aa2.3□□□□□ -2.04
PCM1-219ENST00000523540 ST20-AS1Q8NBB2 130 aa2.3□□□□□ -2.04
PCM1-219ENST00000523540 OR9G4Q8NGQ1 327 aa2.3□□□□□ -2.04
PCM1-219ENST00000523540 OR10G6Q8NH81 332 aa2.3□□□□□ -2.04
PCM1-219ENST00000523540 OR51E1Q8TCB6 317 aa2.3□□□□□ -2.04
PCM1-219ENST00000523540 NRGNQ92686 78 aa2.3□□□□□ -2.04
PCM1-219ENST00000523540 C8orf44Q96CB5 159 aa2.3□□□□□ -2.04
PCM1-219ENST00000523540 ACTR3CQ9C0K3 210 aaPredicted RBP2.3□□□□□ -2.04
PCM1-219ENST00000523540 TMEM38AQ9H6F2 299 aa2.3□□□□□ -2.04
PCM1-219ENST00000523540 TMEM27Q9HBJ8 222 aa2.3□□□□□ -2.04
PCM1-219ENST00000523540 RRP15Q9Y3B9 282 aaKnown RBP2.3□□□□□ -2.04
PCM1-219ENST00000523540 CBY1Q9Y3M2 126 aa2.3□□□□□ -2.04
PCM1-219ENST00000523540 SCN4AP35499 1836 aa2.3□□□□□ -2.04
PCM1-219ENST00000523540 PCDH11XQ9BZA7 1347 aa2.29□□□□□ -2.04
PCM1-219ENST00000523540 SMIM26A0A096LP01 95 aa2.29□□□□□ -2.04
PCM1-219ENST00000523540 IGHV1-69DA0A0B4J2H0 117 aa2.29□□□□□ -2.04
PCM1-219ENST00000523540 ZNF233A6NK53 670 aa2.29□□□□□ -2.04
PCM1-219ENST00000523540 SLC9A3R1O14745 358 aaPredicted RBP2.29□□□□□ -2.04
PCM1-219ENST00000523540 IGHV3-11P01762 117 aa2.29□□□□□ -2.04
PCM1-219ENST00000523540 EIF2S2P20042 333 aaKnown RBP2.29□□□□□ -2.04
PCM1-219ENST00000523540 IL32P24001 234 aa2.29□□□□□ -2.04
PCM1-219ENST00000523540 SYKP43405 635 aa2.29□□□□□ -2.04
PCM1-219ENST00000523540 ZNF121P58317 390 aaPredicted RBP2.29□□□□□ -2.04
PCM1-219ENST00000523540 RPS15P62841 145 aaKnown RBP2.29□□□□□ -2.04
PCM1-219ENST00000523540 RBMY1FQ15415 496 aaKnown RBP2.29□□□□□ -2.04
PCM1-219ENST00000523540 TMEM220Q6QAJ8 160 aa2.29□□□□□ -2.04
PCM1-219ENST00000523540 LRRC52Q8N7C0 313 aa2.29□□□□□ -2.04
PCM1-219ENST00000523540 TMEM105Q8N8V8 129 aa2.29□□□□□ -2.04
PCM1-219ENST00000523540 XPO6Q96QU8 1125 aaKnown RBP2.29□□□□□ -2.04
PCM1-219ENST00000523540 ZYG11BQ9C0D3 744 aa2.29□□□□□ -2.04
PCM1-219ENST00000523540 FAM192AQ9GZU8 254 aa2.29□□□□□ -2.04
PCM1-219ENST00000523540 AGPAT4Q9NRZ5 378 aa2.29□□□□□ -2.04
PCM1-219ENST00000523540 LYARQ9NX58 379 aaKnown RBP2.29□□□□□ -2.04
PCM1-219ENST00000523540 PTTG3PQ9NZH4 202 aa2.29□□□□□ -2.04
PCM1-219ENST00000523540 OR5H1A6NKK0 313 aa2.28□□□□□ -2.04
PCM1-219ENST00000523540 NDUFC2-KCTD14E9PQ53 114 aa2.28□□□□□ -2.04
PCM1-219ENST00000523540 H7C0C1 242 aa2.28□□□□□ -2.04
PCM1-219ENST00000523540 LSM8O95777 96 aaKnown RBP2.28□□□□□ -2.04
PCM1-219ENST00000523540 CTRB1P17538 263 aa2.28□□□□□ -2.04
PCM1-219ENST00000523540 POLR2IP36954 125 aaKnown RBP2.28□□□□□ -2.04
PCM1-219ENST00000523540 ATP5OP48047 213 aa2.28□□□□□ -2.04
PCM1-219ENST00000523540 SLC39A6Q13433 755 aa2.28□□□□□ -2.04
PCM1-219ENST00000523540 ART3Q13508 389 aa2.28□□□□□ -2.04
PCM1-219ENST00000523540 NCF4Q15080 339 aa2.28□□□□□ -2.04
PCM1-219ENST00000523540 TEX30Q5JUR7 227 aa2.28□□□□□ -2.04
PCM1-219ENST00000523540 SPESP1Q6UW49 350 aa2.28□□□□□ -2.04
PCM1-219ENST00000523540 CSGALNACT2Q8N6G5 542 aa2.28□□□□□ -2.04
PCM1-219ENST00000523540 TTC29Q8NA56 475 aaPredicted RBP2.28□□□□□ -2.04
PCM1-219ENST00000523540 GPR26Q8NDV2 337 aa2.28□□□□□ -2.04
PCM1-219ENST00000523540 FAM81AQ8TBF8 368 aa2.28□□□□□ -2.04
PCM1-219ENST00000523540 TEKT3Q9BXF9 490 aa2.28□□□□□ -2.04
PCM1-219ENST00000523540 SLIRPQ9GZT3 109 aaKnown RBP2.28□□□□□ -2.04
PCM1-219ENST00000523540 GEMIN7Q9H840 131 aaKnown RBP2.28□□□□□ -2.04
PCM1-219ENST00000523540 BEX1Q9HBH7 125 aa2.28□□□□□ -2.04
PCM1-219ENST00000523540 MYOZ1Q9NP98 299 aaPredicted RBP2.28□□□□□ -2.04
PCM1-219ENST00000523540 IGHV3OR16-9A0A0B4J2B5 98 aa2.27□□□□□ -2.05
PCM1-219ENST00000523540 SYCE1LA8MT33 242 aa2.27□□□□□ -2.05
PCM1-219ENST00000523540 TNFRSF11BO00300 401 aa2.27□□□□□ -2.05
PCM1-219ENST00000523540 NMT2O60551 498 aa2.27□□□□□ -2.05
PCM1-219ENST00000523540 EIF1BO60739 113 aaKnown RBP2.27□□□□□ -2.05
PCM1-219ENST00000523540 CDH16O75309 829 aa2.27□□□□□ -2.05
PCM1-219ENST00000523540 CCNB2O95067 398 aa2.27□□□□□ -2.05
PCM1-219ENST00000523540 PAHP00439 452 aa2.27□□□□□ -2.05
PCM1-219ENST00000523540 HPRT1P00492 218 aa2.27□□□□□ -2.05
PCM1-219ENST00000523540 HBE1P02100 147 aa2.27□□□□□ -2.05
PCM1-219ENST00000523540 RAB4AP20338 218 aa2.27□□□□□ -2.05
PCM1-219ENST00000523540 USF1P22415 310 aaPredicted RBP2.27□□□□□ -2.05
PCM1-219ENST00000523540 STOMP27105 288 aa2.27□□□□□ -2.05
PCM1-219ENST00000523540 EIF1P41567 113 aaKnown RBP2.27□□□□□ -2.05
PCM1-219ENST00000523540 UQCRFS1P47985 274 aa2.27□□□□□ -2.05
PCM1-219ENST00000523540 CCNG1P51959 295 aa2.27□□□□□ -2.05
PCM1-219ENST00000523540 BEX3Q00994 111 aa2.27□□□□□ -2.05
PCM1-219ENST00000523540 SIGLEC14Q08ET2 396 aa2.27□□□□□ -2.05
PCM1-219ENST00000523540 GCSAMLQ5JQS6 135 aa2.27□□□□□ -2.05
PCM1-219ENST00000523540 SPANXN2Q5MJ10 180 aa2.27□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms