RNA–Protein interactions for RNA: ENST00000520168.5

SDCBP-207, Transcript of syndecan binding protein, humanhuman

TSL 2 BASIC

Gene SDCBP, Length 1,097 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-207ENST00000520168 PET117Q6UWS5 81 aa4.06□□□□□ -1.76
SDCBP-207ENST00000520168 SCAIQ8N9R8 606 aa4.06□□□□□ -1.76
SDCBP-207ENST00000520168 ICA1LQ8NDH6 482 aa4.06□□□□□ -1.76
SDCBP-207ENST00000520168 OR7A2PQ8NGA2 310 aa4.06□□□□□ -1.76
SDCBP-207ENST00000520168 OR8B3Q8NGG8 313 aa4.06□□□□□ -1.76
SDCBP-207ENST00000520168 OR1J1Q8NGS3 322 aa4.06□□□□□ -1.76
SDCBP-207ENST00000520168 OR5R1Q8NH85 324 aa4.06□□□□□ -1.76
SDCBP-207ENST00000520168 OR5AK3PQ8NH89 298 aa4.06□□□□□ -1.76
SDCBP-207ENST00000520168 TWIST2Q8WVJ9 160 aa4.06□□□□□ -1.76
SDCBP-207ENST00000520168 XAGE5Q8WWM1 108 aa4.06□□□□□ -1.76
SDCBP-207ENST00000520168 SLC25A36Q96CQ1 311 aa4.06□□□□□ -1.76
SDCBP-207ENST00000520168 COQ8BQ96D53 544 aa4.06□□□□□ -1.76
SDCBP-207ENST00000520168 NEIL1Q96FI4 390 aaPredicted RBP4.06□□□□□ -1.76
SDCBP-207ENST00000520168 C3orf30Q96M34 536 aa4.06□□□□□ -1.76
SDCBP-207ENST00000520168 TRNT1Q96Q11 434 aaKnown RBP4.06□□□□□ -1.76
SDCBP-207ENST00000520168 OR8B2Q96RD0 313 aa4.06□□□□□ -1.76
SDCBP-207ENST00000520168 DCLRE1CQ96SD1 692 aaKnown RBP4.06□□□□□ -1.76
SDCBP-207ENST00000520168 CDRT15Q96T59 188 aa4.06□□□□□ -1.76
SDCBP-207ENST00000520168 ARHGDIGQ99819 225 aa4.06□□□□□ -1.76
SDCBP-207ENST00000520168 DUSP26Q9BV47 211 aa4.06□□□□□ -1.76
SDCBP-207ENST00000520168 OR51I1Q9H343 314 aa4.06□□□□□ -1.76
SDCBP-207ENST00000520168 ARMC7Q9H6L4 198 aa4.06□□□□□ -1.76
SDCBP-207ENST00000520168 MTHFD2LQ9H903 347 aaPredicted RBP4.06□□□□□ -1.76
SDCBP-207ENST00000520168 S100A14Q9HCY8 104 aa4.06□□□□□ -1.76
SDCBP-207ENST00000520168 TUBG2Q9NRH3 451 aa4.06□□□□□ -1.76
SDCBP-207ENST00000520168 B3GAT1Q9P2W7 334 aa4.06□□□□□ -1.76
SDCBP-207ENST00000520168 EIF3KQ9UBQ5 218 aaKnown RBP4.06□□□□□ -1.76
SDCBP-207ENST00000520168 CLN8Q9UBY8 286 aa4.06□□□□□ -1.76
SDCBP-207ENST00000520168 NDUFAF1Q9Y375 327 aa4.06□□□□□ -1.76
SDCBP-207ENST00000520168 DNAJC15Q9Y5T4 150 aa4.06□□□□□ -1.76
SDCBP-207ENST00000520168 NOTCH3Q9UM47 2321 aa4.06□□□□□ -1.76
SDCBP-207ENST00000520168 CDHR4A6H8M9 788 aa4.05□□□□□ -1.76
SDCBP-207ENST00000520168 ANKRD61A6NGH8 418 aa4.05□□□□□ -1.76
SDCBP-207ENST00000520168 ZSCAN5BA6NJL1 495 aa4.05□□□□□ -1.76
SDCBP-207ENST00000520168 ZNF726A6NNF4 738 aa4.05□□□□□ -1.76
SDCBP-207ENST00000520168 TMEM233B4DJY2 109 aa4.05□□□□□ -1.76
SDCBP-207ENST00000520168 H0Y8G0 127 aa4.05□□□□□ -1.76
SDCBP-207ENST00000520168 K7EIL1 84 aa4.05□□□□□ -1.76
SDCBP-207ENST00000520168 RNASET2O00584 256 aaKnown RBP4.05□□□□□ -1.76
SDCBP-207ENST00000520168 SLC25A17O43808 307 aa4.05□□□□□ -1.76
SDCBP-207ENST00000520168 TOX4O94842 621 aa4.05□□□□□ -1.76
SDCBP-207ENST00000520168 IGHV4-59P01825 116 aa4.05□□□□□ -1.76
SDCBP-207ENST00000520168 FBP1P09467 338 aa4.05□□□□□ -1.76
SDCBP-207ENST00000520168 LINC00032P0C843 101 aa4.05□□□□□ -1.76
SDCBP-207ENST00000520168 AHCYP23526 432 aa4.05□□□□□ -1.76
SDCBP-207ENST00000520168 CFL1P23528 166 aaKnown RBP4.05□□□□□ -1.76
SDCBP-207ENST00000520168 GABRA5P31644 462 aa4.05□□□□□ -1.76
SDCBP-207ENST00000520168 RPS5P46782 204 aaKnown RBP4.05□□□□□ -1.76
SDCBP-207ENST00000520168 GBX2P52951 348 aaPredicted RBP4.05□□□□□ -1.76
SDCBP-207ENST00000520168 PSME3P61289 254 aa4.05□□□□□ -1.76
SDCBP-207ENST00000520168 FGF12P61328 243 aa4.05□□□□□ -1.76
SDCBP-207ENST00000520168 ERVS71-1P61550 626 aa4.05□□□□□ -1.76
SDCBP-207ENST00000520168 EMX2Q04743 252 aa4.05□□□□□ -1.76
SDCBP-207ENST00000520168 GLO1Q04760 184 aa4.05□□□□□ -1.76
SDCBP-207ENST00000520168 DBPQ10586 325 aaPredicted RBP4.05□□□□□ -1.76
SDCBP-207ENST00000520168 MAD2L1Q13257 205 aaPredicted RBP4.05□□□□□ -1.76
SDCBP-207ENST00000520168 HABP2Q14520 560 aaPredicted RBP4.05□□□□□ -1.76
SDCBP-207ENST00000520168 ZNF181Q2M3W8 571 aa4.05□□□□□ -1.76
SDCBP-207ENST00000520168 LIN52Q52LA3 116 aa4.05□□□□□ -1.76
SDCBP-207ENST00000520168 PDCD4Q53EL6 469 aaKnown RBP4.05□□□□□ -1.76
SDCBP-207ENST00000520168 MTX3Q5HYI7 312 aa4.05□□□□□ -1.76
SDCBP-207ENST00000520168 DEFB121Q5J5C9 76 aa4.05□□□□□ -1.76
SDCBP-207ENST00000520168 SAMD4BQ5PRF9 694 aaKnown RBP4.05□□□□□ -1.76
SDCBP-207ENST00000520168 SLC35F1Q5T1Q4 408 aa4.05□□□□□ -1.76
SDCBP-207ENST00000520168 FAM219BQ5XKK7 198 aa4.05□□□□□ -1.76
SDCBP-207ENST00000520168 SLC27A4Q6P1M0 643 aa4.05□□□□□ -1.76
SDCBP-207ENST00000520168 LRRC74BQ6ZQY2 392 aa4.05□□□□□ -1.76
SDCBP-207ENST00000520168 H1FNTQ75WM6 255 aaPredicted RBP4.05□□□□□ -1.76
SDCBP-207ENST00000520168 KLBQ86Z14 1044 aa4.05□□□□□ -1.76
SDCBP-207ENST00000520168 SKA3Q8IX90 412 aa4.05□□□□□ -1.76
SDCBP-207ENST00000520168 C1orf87Q8N0U7 546 aa4.05□□□□□ -1.76
SDCBP-207ENST00000520168 MIER2Q8N344 545 aa4.05□□□□□ -1.76
SDCBP-207ENST00000520168 KDM8Q8N371 416 aa4.05□□□□□ -1.76
SDCBP-207ENST00000520168 CADM2Q8N3J6 435 aa4.05□□□□□ -1.76
SDCBP-207ENST00000520168 SLC22A24Q8N4F4 322 aa4.05□□□□□ -1.76
SDCBP-207ENST00000520168 PNLDC1Q8NA58 520 aaKnown RBP4.05□□□□□ -1.76
SDCBP-207ENST00000520168 SCCPDHQ8NBX0 429 aa4.05□□□□□ -1.76
SDCBP-207ENST00000520168 BVESQ8NE79 360 aa4.05□□□□□ -1.76
SDCBP-207ENST00000520168 OR6N1Q8NGY5 312 aa4.05□□□□□ -1.76
SDCBP-207ENST00000520168 KLF14Q8TD94 323 aaPredicted RBP4.05□□□□□ -1.76
SDCBP-207ENST00000520168 GEMIN6Q8WXD5 167 aaKnown RBP4.05□□□□□ -1.76
SDCBP-207ENST00000520168 DNAJC9Q8WXX5 260 aa4.05□□□□□ -1.76
SDCBP-207ENST00000520168 CNOT9Q92600 299 aaKnown RBP4.05□□□□□ -1.76
SDCBP-207ENST00000520168 SLC38A4Q969I6 547 aa4.05□□□□□ -1.76
SDCBP-207ENST00000520168 RCN3Q96D15 328 aa4.05□□□□□ -1.76
SDCBP-207ENST00000520168 CLPTM1LQ96KA5 538 aa4.05□□□□□ -1.76
SDCBP-207ENST00000520168 PPP1R36Q96LQ0 422 aa4.05□□□□□ -1.76
SDCBP-207ENST00000520168 PPP3R2Q96LZ3 170 aa4.05□□□□□ -1.76
SDCBP-207ENST00000520168 SIGLEC11Q96RL6 698 aa4.05□□□□□ -1.76
SDCBP-207ENST00000520168 C9orf16Q9BUW7 83 aa4.05□□□□□ -1.76
SDCBP-207ENST00000520168 GPR61Q9BZJ8 451 aa4.05□□□□□ -1.76
SDCBP-207ENST00000520168 KCNN2Q9H2S1 579 aa4.05□□□□□ -1.76
SDCBP-207ENST00000520168 ZCCHC4Q9H5U6 513 aa4.05□□□□□ -1.76
SDCBP-207ENST00000520168 RANBP3Q9H6Z4 567 aaPredicted RBP4.05□□□□□ -1.76
SDCBP-207ENST00000520168 GORASP2Q9H8Y8 452 aa4.05□□□□□ -1.76
SDCBP-207ENST00000520168 RNF121Q9H920 327 aa4.05□□□□□ -1.76
SDCBP-207ENST00000520168 CACYBPQ9HB71 228 aaKnown RBP4.05□□□□□ -1.76
SDCBP-207ENST00000520168 RAB18Q9NP72 206 aa4.05□□□□□ -1.76
SDCBP-207ENST00000520168 TNFRSF12AQ9NP84 129 aa4.05□□□□□ -1.76
SDCBP-207ENST00000520168 SDR39U1Q9NRG7 319 aaPredicted RBP4.05□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms