RNA–Protein interactions for RNA: ENST00000488543.1

HDAC6-230, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 2,484 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-230ENST00000488543 UBL3O95164 117 aa10.75□□□□□ -0.69
HDAC6-230ENST00000488543 MPC2O95563 127 aa10.75□□□□□ -0.69
HDAC6-230ENST00000488543 CFDP00746 253 aaPredicted RBP10.75□□□□□ -0.69
HDAC6-230ENST00000488543 ANXA3P12429 323 aa10.75□□□□□ -0.69
HDAC6-230ENST00000488543 ZNF823P16415 610 aa10.75□□□□□ -0.69
HDAC6-230ENST00000488543 ZNF81P51508 661 aa10.75□□□□□ -0.69
HDAC6-230ENST00000488543 SUCLG1P53597 346 aaKnown RBP10.75□□□□□ -0.69
HDAC6-230ENST00000488543 KLF9Q13886 244 aaPredicted RBP10.75□□□□□ -0.69
HDAC6-230ENST00000488543 HSD17B12Q53GQ0 312 aa10.75□□□□□ -0.69
HDAC6-230ENST00000488543 ZBTB37Q5TC79 503 aa10.75□□□□□ -0.69
HDAC6-230ENST00000488543 IGFL2Q6UWQ7 119 aa10.75□□□□□ -0.69
HDAC6-230ENST00000488543 HDDC2Q7Z4H3 204 aa10.75□□□□□ -0.69
HDAC6-230ENST00000488543 LINC00346Q8IVM7 164 aa10.75□□□□□ -0.69
HDAC6-230ENST00000488543 ZIC4Q8N9L1 334 aa10.75□□□□□ -0.69
HDAC6-230ENST00000488543 OR9K2Q8NGE7 335 aa10.75□□□□□ -0.69
HDAC6-230ENST00000488543 GPR137Q96N19 417 aa10.75□□□□□ -0.69
HDAC6-230ENST00000488543 KCNK15Q9H427 330 aa10.75□□□□□ -0.69
HDAC6-230ENST00000488543 ING4Q9UNL4 249 aa10.75□□□□□ -0.69
HDAC6-230ENST00000488543 KLF13Q9Y2Y9 288 aaPredicted RBP10.75□□□□□ -0.69
HDAC6-230ENST00000488543 NUBP2Q9Y5Y2 271 aa10.75□□□□□ -0.69
HDAC6-230ENST00000488543 ZSCAN5BA6NJL1 495 aa10.75□□□□□ -0.69
HDAC6-230ENST00000488543 ZNF879B4DU55 563 aa10.75□□□□□ -0.69
HDAC6-230ENST00000488543 DNPH1O43598 174 aa10.75□□□□□ -0.69
HDAC6-230ENST00000488543 SRSF10O75494 262 aaKnown RBP10.75□□□□□ -0.69
HDAC6-230ENST00000488543 CRYZL1O95825 349 aa10.75□□□□□ -0.69
HDAC6-230ENST00000488543 PNPP00491 289 aa10.75□□□□□ -0.69
HDAC6-230ENST00000488543 LAP3P28838 519 aa10.75□□□□□ -0.69
HDAC6-230ENST00000488543 RAC3P60763 192 aa10.75□□□□□ -0.69
HDAC6-230ENST00000488543 PPIAP62937 165 aaKnown RBP10.75□□□□□ -0.69
HDAC6-230ENST00000488543 SNTB2Q13425 540 aaKnown RBP10.75□□□□□ -0.69
HDAC6-230ENST00000488543 LGALSLQ3ZCW2 172 aaPredicted RBP10.75□□□□□ -0.69
HDAC6-230ENST00000488543 WDR38Q5JTN6 314 aa10.75□□□□□ -0.69
HDAC6-230ENST00000488543 TOR2AQ5JU69 321 aa10.75□□□□□ -0.69
HDAC6-230ENST00000488543 LRFN4Q6PJG9 635 aa10.75□□□□□ -0.69
HDAC6-230ENST00000488543 PLXDC2Q6UX71 529 aa10.75□□□□□ -0.69
HDAC6-230ENST00000488543 ZNF680Q8NEM1 530 aa10.75□□□□□ -0.69
HDAC6-230ENST00000488543 OR5AK2Q8NH90 309 aa10.75□□□□□ -0.69
HDAC6-230ENST00000488543 MCHR2Q969V1 340 aa10.75□□□□□ -0.69
HDAC6-230ENST00000488543 ZNF385AQ96PM9 386 aaKnown RBP10.75□□□□□ -0.69
HDAC6-230ENST00000488543 OR2M2Q96R28 347 aa10.75□□□□□ -0.69
HDAC6-230ENST00000488543 DEFB127Q9H1M4 99 aa10.75□□□□□ -0.69
HDAC6-230ENST00000488543 C20orf85Q9H1P6 137 aa10.75□□□□□ -0.69
HDAC6-230ENST00000488543 SLC6A15Q9H2J7 730 aa10.75□□□□□ -0.69
HDAC6-230ENST00000488543 METTL17Q9H7H0 456 aaPredicted RBP10.75□□□□□ -0.69
HDAC6-230ENST00000488543 HEXA-AS1Q9H8Q6 139 aa10.75□□□□□ -0.69
HDAC6-230ENST00000488543 EIF3KQ9UBQ5 218 aaKnown RBP10.75□□□□□ -0.69
HDAC6-230ENST00000488543 LRP12Q9Y561 859 aa10.75□□□□□ -0.69
HDAC6-230ENST00000488543 PCDHGA9Q9Y5G4 932 aaKnown RBP10.75□□□□□ -0.69
HDAC6-230ENST00000488543 EIF1AYO14602 144 aaKnown RBP10.74□□□□□ -0.69
HDAC6-230ENST00000488543 ZNHIT1O43257 154 aa10.74□□□□□ -0.69
HDAC6-230ENST00000488543 VAMP5O95183 116 aa10.74□□□□□ -0.69
HDAC6-230ENST00000488543 HPNP05981 417 aa10.74□□□□□ -0.69
HDAC6-230ENST00000488543 MMP15P51511 669 aa10.74□□□□□ -0.69
HDAC6-230ENST00000488543 MFGE8Q08431 387 aaPredicted RBP10.74□□□□□ -0.69
HDAC6-230ENST00000488543 PHYHD1Q5SRE7 291 aa10.74□□□□□ -0.69
HDAC6-230ENST00000488543 KCTD18Q6PI47 426 aaPredicted RBP10.74□□□□□ -0.69
HDAC6-230ENST00000488543 TEX261Q6UWH6 196 aa10.74□□□□□ -0.69
HDAC6-230ENST00000488543 DCXRQ7Z4W1 244 aa10.74□□□□□ -0.69
HDAC6-230ENST00000488543 ZFP62Q8NB50 900 aaPredicted RBP10.74□□□□□ -0.69
HDAC6-230ENST00000488543 OR10AC1Q8NH08 325 aa10.74□□□□□ -0.69
HDAC6-230ENST00000488543 PHYHIPQ92561 330 aa10.74□□□□□ -0.69
HDAC6-230ENST00000488543 TMEM54Q969K7 222 aa10.74□□□□□ -0.69
HDAC6-230ENST00000488543 ZCCHC4Q9H5U6 513 aa10.74□□□□□ -0.69
HDAC6-230ENST00000488543 U3KQ87 197 aa10.74□□□□□ -0.69
HDAC6-230ENST00000488543 ZNF726A6NNF4 738 aa10.74□□□□□ -0.69
HDAC6-230ENST00000488543 G3V3Q6 166 aa10.74□□□□□ -0.69
HDAC6-230ENST00000488543 ARPC1BO15143 372 aaKnown RBP10.74□□□□□ -0.69
HDAC6-230ENST00000488543 ARL6IP5O75915 188 aa10.74□□□□□ -0.69
HDAC6-230ENST00000488543 GLSO94925 669 aaPredicted RBP10.74□□□□□ -0.69
HDAC6-230ENST00000488543 FOSL1P15407 271 aa10.74□□□□□ -0.69
HDAC6-230ENST00000488543 SRMP19623 302 aa10.74□□□□□ -0.69
HDAC6-230ENST00000488543 RAD52P43351 418 aa10.74□□□□□ -0.69
HDAC6-230ENST00000488543 OR7E24Q6IFN5 339 aa10.74□□□□□ -0.69
HDAC6-230ENST00000488543 CORO6Q6QEF8 472 aa10.74□□□□□ -0.69
HDAC6-230ENST00000488543 ZNF767PQ75MW2 155 aa10.74□□□□□ -0.69
HDAC6-230ENST00000488543 SLC38A6Q8IZM9 456 aa10.74□□□□□ -0.69
HDAC6-230ENST00000488543 TMEM123Q8N131 208 aa10.74□□□□□ -0.69
HDAC6-230ENST00000488543 OR2V1Q8NHB1 315 aa10.74□□□□□ -0.69
HDAC6-230ENST00000488543 CCDC120Q96HB5 630 aa10.74□□□□□ -0.69
HDAC6-230ENST00000488543 C1QTNF6Q9BXI9 259 aa10.74□□□□□ -0.69
HDAC6-230ENST00000488543 LIN7BQ9HAP6 207 aa10.74□□□□□ -0.69
HDAC6-230ENST00000488543 EMC7Q9NPA0 242 aa10.74□□□□□ -0.69
HDAC6-230ENST00000488543 DLL4Q9NR61 685 aa10.74□□□□□ -0.69
HDAC6-230ENST00000488543 FBXL3Q9UKT7 428 aa10.74□□□□□ -0.69
HDAC6-230ENST00000488543 LIPGQ9Y5X9 500 aa10.74□□□□□ -0.69
HDAC6-230ENST00000488543 A0A1W2PPL8 197 aa10.73□□□□□ -0.69
HDAC6-230ENST00000488543 TMEM212A6NML5 194 aa10.73□□□□□ -0.69
HDAC6-230ENST00000488543 CXCL13O43927 109 aa10.73□□□□□ -0.69
HDAC6-230ENST00000488543 SLC22A5O76082 557 aa10.73□□□□□ -0.69
HDAC6-230ENST00000488543 ZNF432O94892 652 aa10.73□□□□□ -0.69
HDAC6-230ENST00000488543 QDPRP09417 244 aa10.73□□□□□ -0.69
HDAC6-230ENST00000488543 ZNF250P15622 560 aa10.73□□□□□ -0.69
HDAC6-230ENST00000488543 POU3F2P20265 443 aaPredicted RBP10.73□□□□□ -0.69
HDAC6-230ENST00000488543 DNASE1P24855 282 aa10.73□□□□□ -0.69
HDAC6-230ENST00000488543 CDAP32320 146 aa10.73□□□□□ -0.69
HDAC6-230ENST00000488543 DCTDP32321 178 aa10.73□□□□□ -0.69
HDAC6-230ENST00000488543 CCR9P51686 369 aa10.73□□□□□ -0.69
HDAC6-230ENST00000488543 ZNF133P52736 654 aaPredicted RBP10.73□□□□□ -0.69
HDAC6-230ENST00000488543 RIDAP52758 137 aaKnown RBP10.73□□□□□ -0.69
HDAC6-230ENST00000488543 SRYQ05066 204 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms