RNA–Protein interactions for RNA: ENST00000488427.1

ITGB1-214, Transcript of integrin subunit beta 1, humanhuman

TSL 1 (best)

Gene ITGB1, Length 861 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-214ENST00000488427 COA6Q5JTJ3 125 aaKnown RBP2.63□□□□□ -1.99
ITGB1-214ENST00000488427 KCNIP4Q6PIL6 250 aa2.63□□□□□ -1.99
ITGB1-214ENST00000488427 HORMAD1Q86X24 394 aa2.63□□□□□ -1.99
ITGB1-214ENST00000488427 RNF185Q96GF1 192 aa2.63□□□□□ -1.99
ITGB1-214ENST00000488427 FCRL1Q96LA6 429 aa2.63□□□□□ -1.99
ITGB1-214ENST00000488427 C16orf45Q96MC5 204 aaPredicted RBP2.63□□□□□ -1.99
ITGB1-214ENST00000488427 UCK2Q9BZX2 261 aa2.63□□□□□ -1.99
ITGB1-214ENST00000488427 IFI27L2Q9H2X8 130 aa2.63□□□□□ -1.99
ITGB1-214ENST00000488427 PLEKHF2Q9H8W4 249 aa2.63□□□□□ -1.99
ITGB1-214ENST00000488427 ELOVL3Q9HB03 270 aa2.63□□□□□ -1.99
ITGB1-214ENST00000488427 LHX9Q9NQ69 397 aa2.63□□□□□ -1.99
ITGB1-214ENST00000488427 LAMP5Q9UJQ1 280 aa2.63□□□□□ -1.99
ITGB1-214ENST00000488427 MRPS7Q9Y2R9 242 aaKnown RBP2.63□□□□□ -1.99
ITGB1-214ENST00000488427 C12orf71A8MTZ7 269 aa2.62□□□□□ -1.99
ITGB1-214ENST00000488427 KRTAP4-16G5E9R7 235 aaPredicted RBP2.62□□□□□ -1.99
ITGB1-214ENST00000488427 DLGAP1O14490 977 aa2.62□□□□□ -1.99
ITGB1-214ENST00000488427 SLC31A2O15432 143 aa2.62□□□□□ -1.99
ITGB1-214ENST00000488427 AIREO43918 545 aa2.62□□□□□ -1.99
ITGB1-214ENST00000488427 GCAP28676 217 aa2.62□□□□□ -1.99
ITGB1-214ENST00000488427 CD1CP29017 333 aa2.62□□□□□ -1.99
ITGB1-214ENST00000488427 CA5AP35218 305 aa2.62□□□□□ -1.99
ITGB1-214ENST00000488427 RPL13AP40429 203 aaKnown RBP2.62□□□□□ -1.99
ITGB1-214ENST00000488427 P2RY1P47900 373 aa2.62□□□□□ -1.99
ITGB1-214ENST00000488427 NMUP48645 174 aa2.62□□□□□ -1.99
ITGB1-214ENST00000488427 PPT1P50897 306 aa2.62□□□□□ -1.99
ITGB1-214ENST00000488427 TP53I3Q53FA7 332 aa2.62□□□□□ -1.99
ITGB1-214ENST00000488427 TMEM255AQ5JRV8 349 aa2.62□□□□□ -1.99
ITGB1-214ENST00000488427 TPRG1LQ5T0D9 272 aa2.62□□□□□ -1.99
ITGB1-214ENST00000488427 C9orf64Q5T6V5 341 aa2.62□□□□□ -1.99
ITGB1-214ENST00000488427 FRMPD2BQ6IN97 320 aa2.62□□□□□ -1.99
ITGB1-214ENST00000488427 ZNF683Q8IZ20 524 aa2.62□□□□□ -1.99
ITGB1-214ENST00000488427 STK40Q8N2I9 435 aa2.62□□□□□ -1.99
ITGB1-214ENST00000488427 FNDC5Q8NAU1 212 aa2.62□□□□□ -1.99
ITGB1-214ENST00000488427 ZNF540Q8NDQ6 660 aa2.62□□□□□ -1.99
ITGB1-214ENST00000488427 NPBQ8NG41 125 aa2.62□□□□□ -1.99
ITGB1-214ENST00000488427 OR4K14Q8NGD5 310 aa2.62□□□□□ -1.99
ITGB1-214ENST00000488427 LILRB4Q8NHJ6 448 aa2.62□□□□□ -1.99
ITGB1-214ENST00000488427 DTX3LQ8TDB6 740 aa2.62□□□□□ -1.99
ITGB1-214ENST00000488427 DDI1Q8WTU0 396 aa2.62□□□□□ -1.99
ITGB1-214ENST00000488427 ARPC1AQ92747 370 aa2.62□□□□□ -1.99
ITGB1-214ENST00000488427 FBXO32Q969P5 355 aa2.62□□□□□ -1.99
ITGB1-214ENST00000488427 FAM131CQ96AQ9 280 aa2.62□□□□□ -1.99
ITGB1-214ENST00000488427 TSNARE1Q96NA8 513 aa2.62□□□□□ -1.99
ITGB1-214ENST00000488427 AMDHD1Q96NU7 426 aa2.62□□□□□ -1.99
ITGB1-214ENST00000488427 CLCC1Q96S66 551 aa2.62□□□□□ -1.99
ITGB1-214ENST00000488427 C6orf50Q9HD87 102 aa2.62□□□□□ -1.99
ITGB1-214ENST00000488427 ZNF226Q9NYT6 803 aa2.62□□□□□ -1.99
ITGB1-214ENST00000488427 SLC25A37Q9NYZ2 338 aa2.62□□□□□ -1.99
ITGB1-214ENST00000488427 IL36GQ9NZH8 169 aa2.62□□□□□ -1.99
ITGB1-214ENST00000488427 OR12D3Q9UGF7 316 aa2.62□□□□□ -1.99
ITGB1-214ENST00000488427 ZNF407Q9C0G0 2248 aa2.61□□□□□ -1.99
ITGB1-214ENST00000488427 IGLV11-55A0A075B6I3 123 aa2.61□□□□□ -1.99
ITGB1-214ENST00000488427 A0A096LNJ9 63 aa2.61□□□□□ -1.99
ITGB1-214ENST00000488427 IQANK1A0A1B0GTG1 560 aa2.61□□□□□ -1.99
ITGB1-214ENST00000488427 RGSL1A5PLK6 1076 aa2.61□□□□□ -1.99
ITGB1-214ENST00000488427 A8MXQ7 604 aa2.61□□□□□ -1.99
ITGB1-214ENST00000488427 ANKRD63C9JTQ0 380 aa2.61□□□□□ -1.99
ITGB1-214ENST00000488427 TM7SF2O76062 418 aa2.61□□□□□ -1.99
ITGB1-214ENST00000488427 STAMBPO95630 424 aa2.61□□□□□ -1.99
ITGB1-214ENST00000488427 CXCL8P10145 99 aa2.61□□□□□ -1.99
ITGB1-214ENST00000488427 MCF2P10911 925 aa2.61□□□□□ -1.99
ITGB1-214ENST00000488427 TBPP20226 339 aa2.61□□□□□ -1.99
ITGB1-214ENST00000488427 ATP6V1C1P21283 382 aa2.61□□□□□ -1.99
ITGB1-214ENST00000488427 ERVK-25P63136 954 aa2.61□□□□□ -1.99
ITGB1-214ENST00000488427 CBX1P83916 185 aa2.61□□□□□ -1.99
ITGB1-214ENST00000488427 ZNF763Q0D2J5 394 aa2.61□□□□□ -1.99
ITGB1-214ENST00000488427 EIF4EBP1Q13541 118 aaPredicted RBP2.61□□□□□ -1.99
ITGB1-214ENST00000488427 SELPLGQ14242 412 aa2.61□□□□□ -1.99
ITGB1-214ENST00000488427 IHHQ14623 411 aa2.61□□□□□ -1.99
ITGB1-214ENST00000488427 PTGES3Q15185 160 aaKnown RBP2.61□□□□□ -1.99
ITGB1-214ENST00000488427 PDK4Q16654 411 aa2.61□□□□□ -1.99
ITGB1-214ENST00000488427 GGTA1PQ4G0N0 100 aa2.61□□□□□ -1.99
ITGB1-214ENST00000488427 CCDC92Q53HC0 331 aaPredicted RBP2.61□□□□□ -1.99
ITGB1-214ENST00000488427 C6orf52Q5T4I8 152 aa2.61□□□□□ -1.99
ITGB1-214ENST00000488427 GPR157Q5UAW9 335 aa2.61□□□□□ -1.99
ITGB1-214ENST00000488427 OR52E8Q6IFG1 317 aa2.61□□□□□ -1.99
ITGB1-214ENST00000488427 ZFP2Q6ZN57 461 aa2.61□□□□□ -1.99
ITGB1-214ENST00000488427 Q6ZPB1 254 aaPredicted RBP2.61□□□□□ -1.99
ITGB1-214ENST00000488427 UTS2BQ765I0 119 aa2.61□□□□□ -1.99
ITGB1-214ENST00000488427 PRSS41Q7RTY9 318 aa2.61□□□□□ -1.99
ITGB1-214ENST00000488427 SLC26A11Q86WA9 606 aa2.61□□□□□ -1.99
ITGB1-214ENST00000488427 OR1F12Q8NHA8 337 aa2.61□□□□□ -1.99
ITGB1-214ENST00000488427 THRSPQ92748 146 aa2.61□□□□□ -1.99
ITGB1-214ENST00000488427 ACBD6Q9BR61 282 aa2.61□□□□□ -1.99
ITGB1-214ENST00000488427 LXNQ9BS40 222 aa2.61□□□□□ -1.99
ITGB1-214ENST00000488427 HDHD3Q9BSH5 251 aaPredicted RBP2.61□□□□□ -1.99
ITGB1-214ENST00000488427 MRPL47Q9HD33 250 aaKnown RBP2.61□□□□□ -1.99
ITGB1-214ENST00000488427 NECAP2Q9NVZ3 263 aa2.61□□□□□ -1.99
ITGB1-214ENST00000488427 SIGLEC8Q9NYZ4 499 aa2.61□□□□□ -1.99
ITGB1-214ENST00000488427 GGA2Q9UJY4 613 aa2.61□□□□□ -1.99
ITGB1-214ENST00000488427 STAP1Q9ULZ2 295 aa2.61□□□□□ -1.99
ITGB1-214ENST00000488427 FARSAQ9Y285 508 aaKnown RBP2.61□□□□□ -1.99
ITGB1-214ENST00000488427 A0A1W2PQ67 120 aa2.6□□□□□ -1.99
ITGB1-214ENST00000488427 ERICH2A1L162 156 aa2.6□□□□□ -1.99
ITGB1-214ENST00000488427 SMCO2A6NFE2 343 aa2.6□□□□□ -1.99
ITGB1-214ENST00000488427 F8VP50 259 aa2.6□□□□□ -1.99
ITGB1-214ENST00000488427 ANGPT2O15123 496 aa2.6□□□□□ -1.99
ITGB1-214ENST00000488427 RAD51BO15315 384 aa2.6□□□□□ -1.99
ITGB1-214ENST00000488427 MED7O43513 233 aa2.6□□□□□ -1.99
ITGB1-214ENST00000488427 PLEKHA8P1O95397 391 aa2.6□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms