RNA–Protein interactions for RNA: ENST00000480836.5

PTPN7-212, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 2

Gene PTPN7, Length 1,189 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-212ENST00000480836 C16orf87Q6PH81 154 aa11.05□□□□□ -0.64
PTPN7-212ENST00000480836 DPY19L2P2Q6ZN68 376 aa11.05□□□□□ -0.64
PTPN7-212ENST00000480836 MUC20Q8N307 709 aaPredicted RBP11.05□□□□□ -0.64
PTPN7-212ENST00000480836 KIR3DL3Q8N743 410 aa11.05□□□□□ -0.64
PTPN7-212ENST00000480836 GJC3Q8NFK1 279 aa11.05□□□□□ -0.64
PTPN7-212ENST00000480836 SLC25A28Q96A46 364 aa11.05□□□□□ -0.64
PTPN7-212ENST00000480836 SLCO4A1Q96BD0 722 aa11.05□□□□□ -0.64
PTPN7-212ENST00000480836 NEIL1Q96FI4 390 aaPredicted RBP11.05□□□□□ -0.64
PTPN7-212ENST00000480836 TBX15Q96SF7 602 aa11.05□□□□□ -0.64
PTPN7-212ENST00000480836 NUDT16L1Q9BRJ7 211 aaKnown RBP11.05□□□□□ -0.64
PTPN7-212ENST00000480836 ANKRD19PQ9H560 264 aa11.05□□□□□ -0.64
PTPN7-212ENST00000480836 SMURF1Q9HCE7 757 aa11.05□□□□□ -0.64
PTPN7-212ENST00000480836 TMEM100Q9NV29 134 aa11.05□□□□□ -0.64
PTPN7-212ENST00000480836 ABCD2Q9UBJ2 740 aa11.05□□□□□ -0.64
PTPN7-212ENST00000480836 MIOXQ9UGB7 285 aa11.05□□□□□ -0.64
PTPN7-212ENST00000480836 FAM181BA6NEQ2 426 aa11.04□□□□□ -0.64
PTPN7-212ENST00000480836 MMP9P14780 707 aa11.04□□□□□ -0.64
PTPN7-212ENST00000480836 RHCEP18577 417 aa11.04□□□□□ -0.64
PTPN7-212ENST00000480836 MSX2P35548 267 aaPredicted RBP11.04□□□□□ -0.64
PTPN7-212ENST00000480836 MDH1P40925 334 aaKnown RBP11.04□□□□□ -0.64
PTPN7-212ENST00000480836 GATA4P43694 442 aa11.04□□□□□ -0.64
PTPN7-212ENST00000480836 PITPNBP48739 271 aa11.04□□□□□ -0.64
PTPN7-212ENST00000480836 SRP9P49458 86 aaKnown RBP11.04□□□□□ -0.64
PTPN7-212ENST00000480836 POU4F2Q12837 409 aa11.04□□□□□ -0.64
PTPN7-212ENST00000480836 SNAI3Q3KNW1 292 aa11.04□□□□□ -0.64
PTPN7-212ENST00000480836 GLYATQ6IB77 296 aa11.04□□□□□ -0.64
PTPN7-212ENST00000480836 LRRN1Q6UXK5 716 aa11.04□□□□□ -0.64
PTPN7-212ENST00000480836 ZNF826PQ6ZT77 177 aa11.04□□□□□ -0.64
PTPN7-212ENST00000480836 SPATC1Q76KD6 591 aa11.04□□□□□ -0.64
PTPN7-212ENST00000480836 RHOUQ7L0Q8 258 aa11.04□□□□□ -0.64
PTPN7-212ENST00000480836 RRM2BQ7LG56 351 aa11.04□□□□□ -0.64
PTPN7-212ENST00000480836 FAM162AQ96A26 154 aa11.04□□□□□ -0.64
PTPN7-212ENST00000480836 HOPXQ9BPY8 73 aaPredicted RBP11.04□□□□□ -0.64
PTPN7-212ENST00000480836 OR52D1Q9H346 318 aa11.04□□□□□ -0.64
PTPN7-212ENST00000480836 PPP1R3EQ9H7J1 279 aa11.04□□□□□ -0.64
PTPN7-212ENST00000480836 MARCH7Q9H992 704 aa11.04□□□□□ -0.64
PTPN7-212ENST00000480836 DCAF13Q9NV06 445 aaKnown RBP11.04□□□□□ -0.64
PTPN7-212ENST00000480836 CYB5R1Q9UHQ9 305 aa11.04□□□□□ -0.64
PTPN7-212ENST00000480836 TMEM5Q9Y2B1 443 aa11.04□□□□□ -0.64
PTPN7-212ENST00000480836 A0A1B0GW55 424 aa11.03□□□□□ -0.64
PTPN7-212ENST00000480836 POM121CA8CG34 1229 aa11.03□□□□□ -0.64
PTPN7-212ENST00000480836 SLC22A2O15244 555 aa11.03□□□□□ -0.64
PTPN7-212ENST00000480836 FSTL3O95633 263 aa11.03□□□□□ -0.64
PTPN7-212ENST00000480836 DUX4L2P0CJ85 424 aa11.03□□□□□ -0.64
PTPN7-212ENST00000480836 DUX4L3P0CJ86 424 aa11.03□□□□□ -0.64
PTPN7-212ENST00000480836 DUX4L4P0CJ87 422 aa11.03□□□□□ -0.64
PTPN7-212ENST00000480836 DUX4L5P0CJ88 424 aa11.03□□□□□ -0.64
PTPN7-212ENST00000480836 DUX4L6P0CJ89 424 aa11.03□□□□□ -0.64
PTPN7-212ENST00000480836 DUX4L7P0CJ90 424 aa11.03□□□□□ -0.64
PTPN7-212ENST00000480836 CA6P23280 308 aa11.03□□□□□ -0.64
PTPN7-212ENST00000480836 CD200P41217 278 aa11.03□□□□□ -0.64
PTPN7-212ENST00000480836 RGS6P49758 472 aa11.03□□□□□ -0.64
PTPN7-212ENST00000480836 PSME3P61289 254 aa11.03□□□□□ -0.64
PTPN7-212ENST00000480836 IL13RA1P78552 427 aa11.03□□□□□ -0.64
PTPN7-212ENST00000480836 ZNF92Q03936 586 aa11.03□□□□□ -0.64
PTPN7-212ENST00000480836 PDLIM3Q53GG5 364 aaPredicted RBP11.03□□□□□ -0.64
PTPN7-212ENST00000480836 DUX4L9Q6RFH8 374 aaPredicted RBP11.03□□□□□ -0.64
PTPN7-212ENST00000480836 SMARCD3Q6STE5 483 aa11.03□□□□□ -0.64
PTPN7-212ENST00000480836 Q6YL49 198 aa11.03□□□□□ -0.64
PTPN7-212ENST00000480836 ARPINQ7Z6K5 226 aa11.03□□□□□ -0.64
PTPN7-212ENST00000480836 ADCK1Q86TW2 530 aa11.03□□□□□ -0.64
PTPN7-212ENST00000480836 ZBTB46Q86UZ6 589 aa11.03□□□□□ -0.64
PTPN7-212ENST00000480836 OR5L1Q8NGL2 311 aa11.03□□□□□ -0.64
PTPN7-212ENST00000480836 OR2AE1Q8NHA4 323 aa11.03□□□□□ -0.64
PTPN7-212ENST00000480836 Q8TCH9 128 aa11.03□□□□□ -0.64
PTPN7-212ENST00000480836 COG8Q96MW5 612 aa11.03□□□□□ -0.64
PTPN7-212ENST00000480836 CHIAQ9BZP6 476 aa11.03□□□□□ -0.64
PTPN7-212ENST00000480836 HDHD2Q9H0R4 259 aa11.03□□□□□ -0.64
PTPN7-212ENST00000480836 CCDC134Q9H6E4 229 aa11.03□□□□□ -0.64
PTPN7-212ENST00000480836 EFCAB1Q9HAE3 211 aa11.03□□□□□ -0.64
PTPN7-212ENST00000480836 RPRD1BQ9NQG5 326 aaKnown RBP11.03□□□□□ -0.64
PTPN7-212ENST00000480836 C1RLQ9NZP8 487 aa11.03□□□□□ -0.64
PTPN7-212ENST00000480836 DUX4Q9UBX2 424 aa11.03□□□□□ -0.64
PTPN7-212ENST00000480836 ATPIF1Q9UII2 106 aa11.03□□□□□ -0.64
PTPN7-212ENST00000480836 V9GYQ6 96 aa11.03□□□□□ -0.64
PTPN7-212ENST00000480836 CMYA5Q8N3K9 4069 aa11.02□□□□□ -0.64
PTPN7-212ENST00000480836 CENPVL3A0A0U1RRI6 287 aa11.02□□□□□ -0.65
PTPN7-212ENST00000480836 J3QW42 95 aa11.02□□□□□ -0.65
PTPN7-212ENST00000480836 ARPC3O15145 178 aa11.02□□□□□ -0.65
PTPN7-212ENST00000480836 PTBP3O95758 552 aaKnown RBP11.02□□□□□ -0.65
PTPN7-212ENST00000480836 LCATP04180 440 aa11.02□□□□□ -0.65
PTPN7-212ENST00000480836 PYCR1P32322 319 aa11.02□□□□□ -0.65
PTPN7-212ENST00000480836 NUDT2P50583 147 aa11.02□□□□□ -0.65
PTPN7-212ENST00000480836 RPS6KA3P51812 740 aa11.02□□□□□ -0.65
PTPN7-212ENST00000480836 PRB3Q04118 309 aaPredicted RBP11.02□□□□□ -0.65
PTPN7-212ENST00000480836 TRAP1Q12931 704 aaKnown RBP11.02□□□□□ -0.65
PTPN7-212ENST00000480836 SLC35F1Q5T1Q4 408 aa11.02□□□□□ -0.65
PTPN7-212ENST00000480836 FIP1L1Q6UN15 594 aaKnown RBP11.02□□□□□ -0.65
PTPN7-212ENST00000480836 BTNL3Q6UXE8 466 aa11.02□□□□□ -0.65
PTPN7-212ENST00000480836 HACD2Q6Y1H2 254 aa11.02□□□□□ -0.65
PTPN7-212ENST00000480836 C11orf53Q8IXP5 236 aa11.02□□□□□ -0.65
PTPN7-212ENST00000480836 BOLLQ8N9W6 283 aaKnown RBP11.02□□□□□ -0.65
PTPN7-212ENST00000480836 SDR9C7Q8NEX9 313 aa11.02□□□□□ -0.65
PTPN7-212ENST00000480836 PITX2Q99697 317 aa11.02□□□□□ -0.65
PTPN7-212ENST00000480836 KCTD14Q9BQ13 255 aaPredicted RBP11.02□□□□□ -0.65
PTPN7-212ENST00000480836 SLITRK2Q9H156 845 aa11.02□□□□□ -0.65
PTPN7-212ENST00000480836 MYLK2Q9H1R3 596 aa11.02□□□□□ -0.65
PTPN7-212ENST00000480836 ZMAT3Q9HA38 289 aaKnown RBP11.02□□□□□ -0.65
PTPN7-212ENST00000480836 CLN8Q9UBY8 286 aa11.02□□□□□ -0.65
PTPN7-212ENST00000480836 AURKCQ9UQB9 309 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms