RNA–Protein interactions for RNA: ENST00000480127.1

COL17A1-205, Transcript of collagen type XVII alpha 1 chain, humanhuman

TSL 3

Gene COL17A1, Length 420 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-205ENST00000480127 GCM1Q9NP62 436 aa5.96□□□□□ -1.46
COL17A1-205ENST00000480127 NRIP3Q9NQ35 241 aa5.96□□□□□ -1.46
COL17A1-205ENST00000480127 CENPMQ9NSP4 180 aa5.96□□□□□ -1.46
COL17A1-205ENST00000480127 TBC1D23Q9NUY8 699 aa5.96□□□□□ -1.46
COL17A1-205ENST00000480127 DCAF13Q9NV06 445 aaKnown RBP5.96□□□□□ -1.46
COL17A1-205ENST00000480127 DCAF16Q9NXF7 216 aa5.96□□□□□ -1.46
COL17A1-205ENST00000480127 VSX1Q9NZR4 365 aaPredicted RBP5.96□□□□□ -1.46
COL17A1-205ENST00000480127 ATPIF1Q9UII2 106 aa5.96□□□□□ -1.46
COL17A1-205ENST00000480127 TRAV40A0A0B4J280 105 aa5.95□□□□□ -1.46
COL17A1-205ENST00000480127 BTBD17A6NE02 478 aa5.95□□□□□ -1.46
COL17A1-205ENST00000480127 TVP23AA6NH52 213 aa5.95□□□□□ -1.46
COL17A1-205ENST00000480127 ANKRD30BLA7E2S9 258 aa5.95□□□□□ -1.46
COL17A1-205ENST00000480127 POM121CA8CG34 1229 aa5.95□□□□□ -1.46
COL17A1-205ENST00000480127 C3orf80F5H4A9 247 aa5.95□□□□□ -1.46
COL17A1-205ENST00000480127 M0R135 149 aa5.95□□□□□ -1.46
COL17A1-205ENST00000480127 TNFRSF11BO00300 401 aa5.95□□□□□ -1.46
COL17A1-205ENST00000480127 GNGT2O14610 69 aa5.95□□□□□ -1.46
COL17A1-205ENST00000480127 IMPA2O14732 288 aa5.95□□□□□ -1.46
COL17A1-205ENST00000480127 ARPC2O15144 300 aa5.95□□□□□ -1.46
COL17A1-205ENST00000480127 ENSAO43768 121 aaKnown RBP5.95□□□□□ -1.46
COL17A1-205ENST00000480127 IDH3BO43837 385 aa5.95□□□□□ -1.46
COL17A1-205ENST00000480127 CCNB2O95067 398 aa5.95□□□□□ -1.46
COL17A1-205ENST00000480127 SCG5P05408 212 aa5.95□□□□□ -1.46
COL17A1-205ENST00000480127 ANXA2P07355 339 aaKnown RBP5.95□□□□□ -1.46
COL17A1-205ENST00000480127 GRPP07492 148 aa5.95□□□□□ -1.46
COL17A1-205ENST00000480127 ADH4P08319 380 aa5.95□□□□□ -1.46
COL17A1-205ENST00000480127 HIST1H1CP16403 213 aaKnown RBP5.95□□□□□ -1.46
COL17A1-205ENST00000480127 PAICSP22234 425 aaKnown RBP5.95□□□□□ -1.46
COL17A1-205ENST00000480127 CA6P23280 308 aa5.95□□□□□ -1.46
COL17A1-205ENST00000480127 PRDX6P30041 224 aa5.95□□□□□ -1.46
COL17A1-205ENST00000480127 FMO3P31513 532 aa5.95□□□□□ -1.46
COL17A1-205ENST00000480127 PYCR1P32322 319 aa5.95□□□□□ -1.46
COL17A1-205ENST00000480127 MSX2P35548 267 aaPredicted RBP5.95□□□□□ -1.46
COL17A1-205ENST00000480127 CDKN2AP42771 156 aaKnown RBP5.95□□□□□ -1.46
COL17A1-205ENST00000480127 SLC15A1P46059 708 aa5.95□□□□□ -1.46
COL17A1-205ENST00000480127 OMPP47874 163 aa5.95□□□□□ -1.46
COL17A1-205ENST00000480127 PRSS12P56730 875 aa5.95□□□□□ -1.46
COL17A1-205ENST00000480127 GNGT1P63211 74 aa5.95□□□□□ -1.46
COL17A1-205ENST00000480127 IL13RA1P78552 427 aa5.95□□□□□ -1.46
COL17A1-205ENST00000480127 KHDRBS1Q07666 443 aaKnown RBP eCLIP5.95□□□□□ -1.46
COL17A1-205ENST00000480127 SEC23BQ15437 767 aa5.95□□□□□ -1.46
COL17A1-205ENST00000480127 TIGD6Q17RP2 521 aa5.95□□□□□ -1.46
COL17A1-205ENST00000480127 RFX4Q33E94 735 aa5.95□□□□□ -1.46
COL17A1-205ENST00000480127 CCDC92Q53HC0 331 aaPredicted RBP5.95□□□□□ -1.46
COL17A1-205ENST00000480127 METTL11BQ5VVY1 283 aa5.95□□□□□ -1.46
COL17A1-205ENST00000480127 RPL13AP3Q6NVV1 102 aa5.95□□□□□ -1.46
COL17A1-205ENST00000480127 CYP2R1Q6VVX0 501 aa5.95□□□□□ -1.46
COL17A1-205ENST00000480127 FBXW12Q6X9E4 464 aa5.95□□□□□ -1.46
COL17A1-205ENST00000480127 C17orf107Q6ZR85 190 aa5.95□□□□□ -1.46
COL17A1-205ENST00000480127 FOXL2NBQ6ZUU3 175 aa5.95□□□□□ -1.46
COL17A1-205ENST00000480127 PTCHD4Q6ZW05 846 aa5.95□□□□□ -1.46
COL17A1-205ENST00000480127 FAM122BQ7Z309 247 aa5.95□□□□□ -1.46
COL17A1-205ENST00000480127 COMMD2Q86X83 199 aa5.95□□□□□ -1.46
COL17A1-205ENST00000480127 KLBQ86Z14 1044 aa5.95□□□□□ -1.46
COL17A1-205ENST00000480127 HIST2H2ABQ8IUE6 130 aaPredicted RBP5.95□□□□□ -1.46
COL17A1-205ENST00000480127 DEFB107AQ8IZN7 70 aa5.95□□□□□ -1.46
COL17A1-205ENST00000480127 BCL6BQ8N143 479 aaPredicted RBP5.95□□□□□ -1.46
COL17A1-205ENST00000480127 PARP8Q8N3A8 854 aa5.95□□□□□ -1.46
COL17A1-205ENST00000480127 FTMTQ8N4E7 242 aa5.95□□□□□ -1.46
COL17A1-205ENST00000480127 LINC00471Q8N535 108 aa5.95□□□□□ -1.46
COL17A1-205ENST00000480127 FAM86B1Q8N7N1 296 aa5.95□□□□□ -1.46
COL17A1-205ENST00000480127 CYB561A3Q8NBI2 242 aa5.95□□□□□ -1.46
COL17A1-205ENST00000480127 SCCPDHQ8NBX0 429 aa5.95□□□□□ -1.46
COL17A1-205ENST00000480127 ZNF799Q96GE5 643 aa5.95□□□□□ -1.46
COL17A1-205ENST00000480127 ZNF48Q96MX3 618 aaPredicted RBP5.95□□□□□ -1.46
COL17A1-205ENST00000480127 SLC30A2Q9BRI3 323 aa5.95□□□□□ -1.46
COL17A1-205ENST00000480127 NUDT16L1Q9BRJ7 211 aaKnown RBP5.95□□□□□ -1.46
COL17A1-205ENST00000480127 PCGF1Q9BSM1 259 aa5.95□□□□□ -1.46
COL17A1-205ENST00000480127 TEX12Q9BXU0 123 aa5.95□□□□□ -1.46
COL17A1-205ENST00000480127 SLC22A4Q9H015 551 aa5.95□□□□□ -1.46
COL17A1-205ENST00000480127 SLITRK2Q9H156 845 aa5.95□□□□□ -1.46
COL17A1-205ENST00000480127 CCDC134Q9H6E4 229 aa5.95□□□□□ -1.46
COL17A1-205ENST00000480127 SP140LQ9H930 580 aa5.95□□□□□ -1.46
COL17A1-205ENST00000480127 IL1RAPQ9NPH3 570 aa5.95□□□□□ -1.46
COL17A1-205ENST00000480127 TRIM36Q9NQ86 728 aa5.95□□□□□ -1.46
COL17A1-205ENST00000480127 MMP26Q9NRE1 261 aa5.95□□□□□ -1.46
COL17A1-205ENST00000480127 ERVK-18Q9QC07 812 aa5.95□□□□□ -1.46
COL17A1-205ENST00000480127 ZNF69Q9UC07 566 aa5.95□□□□□ -1.46
COL17A1-205ENST00000480127 TAGLN3Q9UI15 199 aa5.95□□□□□ -1.46
COL17A1-205ENST00000480127 VWFP04275 2813 aa5.95□□□□□ -1.46
COL17A1-205ENST00000480127 TRAV38-1A0A0B4J264 116 aa5.94□□□□□ -1.46
COL17A1-205ENST00000480127 PPIAL4CA0A0B4J2A2 164 aa5.94□□□□□ -1.46
COL17A1-205ENST00000480127 H0YL77 283 aa5.94□□□□□ -1.46
COL17A1-205ENST00000480127 H3BN98 237 aa5.94□□□□□ -1.46
COL17A1-205ENST00000480127 ADAM20O43506 726 aa5.94□□□□□ -1.46
COL17A1-205ENST00000480127 ICMTO60725 284 aa5.94□□□□□ -1.46
COL17A1-205ENST00000480127 PTP4A3O75365 173 aa5.94□□□□□ -1.46
COL17A1-205ENST00000480127 KRT36O76013 467 aa5.94□□□□□ -1.46
COL17A1-205ENST00000480127 RNASE1P07998 156 aaKnown RBP5.94□□□□□ -1.46
COL17A1-205ENST00000480127 ZNF3P17036 446 aa5.94□□□□□ -1.46
COL17A1-205ENST00000480127 FUT4P22083 530 aa5.94□□□□□ -1.46
COL17A1-205ENST00000480127 POU1F1P28069 291 aa5.94□□□□□ -1.46
COL17A1-205ENST00000480127 GRK5P34947 590 aa5.94□□□□□ -1.46
COL17A1-205ENST00000480127 ERFP50548 548 aa5.94□□□□□ -1.46
COL17A1-205ENST00000480127 PRKXP51817 358 aa5.94□□□□□ -1.46
COL17A1-205ENST00000480127 GMFBP60983 142 aa5.94□□□□□ -1.46
COL17A1-205ENST00000480127 SEC61A1P61619 476 aaKnown RBP5.94□□□□□ -1.46
COL17A1-205ENST00000480127 CBX1P83916 185 aa5.94□□□□□ -1.46
COL17A1-205ENST00000480127 COX10Q12887 443 aa5.94□□□□□ -1.46
COL17A1-205ENST00000480127 HNRNPA0Q13151 305 aaKnown RBP5.94□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms