RNA–Protein interactions for RNA: ENST00000475344.1

LTN1-204, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

TSL 3

Gene LTN1, Length 696 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-204ENST00000475344 PDZK1P1A8MUH7 402 aa1.9□□□□□ -2.11
LTN1-204ENST00000475344 C16orf90A8MZG2 172 aa1.9□□□□□ -2.11
LTN1-204ENST00000475344 REM1O75628 298 aa1.9□□□□□ -2.11
LTN1-204ENST00000475344 SLC22A5O76082 557 aa1.9□□□□□ -2.11
LTN1-204ENST00000475344 P0C880 135 aa1.9□□□□□ -2.11
LTN1-204ENST00000475344 IL1RNP18510 177 aa1.9□□□□□ -2.11
LTN1-204ENST00000475344 BCKDHBP21953 392 aa1.9□□□□□ -2.11
LTN1-204ENST00000475344 STOMP27105 288 aa1.9□□□□□ -2.11
LTN1-204ENST00000475344 GTF2E2P29084 291 aaKnown RBP1.9□□□□□ -2.11
LTN1-204ENST00000475344 PRRX1P54821 245 aa1.9□□□□□ -2.11
LTN1-204ENST00000475344 CRADDP78560 199 aa1.9□□□□□ -2.11
LTN1-204ENST00000475344 BEX3Q00994 111 aa1.9□□□□□ -2.11
LTN1-204ENST00000475344 SEMG2Q02383 582 aa1.9□□□□□ -2.11
LTN1-204ENST00000475344 BAMBIQ13145 260 aa1.9□□□□□ -2.11
LTN1-204ENST00000475344 TPTE2P1Q5T6R2 138 aa1.9□□□□□ -2.11
LTN1-204ENST00000475344 TMEM205Q6UW68 189 aa1.9□□□□□ -2.11
LTN1-204ENST00000475344 MRPL55Q7Z7F7 128 aaKnown RBP1.9□□□□□ -2.11
LTN1-204ENST00000475344 OR11H7Q8NGC8 314 aa1.9□□□□□ -2.11
LTN1-204ENST00000475344 OR10AD1Q8NGE0 317 aa1.9□□□□□ -2.11
LTN1-204ENST00000475344 OR9G4Q8NGQ1 327 aa1.9□□□□□ -2.11
LTN1-204ENST00000475344 OR1P1Q8NH06 330 aa1.9□□□□□ -2.11
LTN1-204ENST00000475344 OR10G6Q8NH81 332 aa1.9□□□□□ -2.11
LTN1-204ENST00000475344 LINC01560Q8TB33 94 aa1.9□□□□□ -2.11
LTN1-204ENST00000475344 NUBPLQ8TB37 319 aa1.9□□□□□ -2.11
LTN1-204ENST00000475344 ZCCHC13Q8WW36 166 aaKnown RBP1.9□□□□□ -2.11
LTN1-204ENST00000475344 APH1BQ8WW43 257 aa1.9□□□□□ -2.11
LTN1-204ENST00000475344 ACTR3CQ9C0K3 210 aaPredicted RBP1.9□□□□□ -2.11
LTN1-204ENST00000475344 OR52D1Q9H346 318 aa1.9□□□□□ -2.11
LTN1-204ENST00000475344 GEMIN7Q9H840 131 aaKnown RBP1.9□□□□□ -2.11
LTN1-204ENST00000475344 MED4Q9NPJ6 270 aa1.9□□□□□ -2.11
LTN1-204ENST00000475344 CLN8Q9UBY8 286 aa1.9□□□□□ -2.11
LTN1-204ENST00000475344 ENOPH1Q9UHY7 261 aa1.9□□□□□ -2.11
LTN1-204ENST00000475344 DENND4AQ7Z401 1863 aa1.89□□□□□ -2.11
LTN1-204ENST00000475344 KCNE1BA0A087WTH5 132 aa1.89□□□□□ -2.11
LTN1-204ENST00000475344 TRAV19A0A0A6YYK7 116 aa1.89□□□□□ -2.11
LTN1-204ENST00000475344 CENPVL3A0A0U1RRI6 287 aa1.89□□□□□ -2.11
LTN1-204ENST00000475344 OR2AG2A6NM03 316 aa1.89□□□□□ -2.11
LTN1-204ENST00000475344 VGLL3A8MV65 326 aa1.89□□□□□ -2.11
LTN1-204ENST00000475344 CHST10O43529 356 aa1.89□□□□□ -2.11
LTN1-204ENST00000475344 CHMP2AO43633 222 aa1.89□□□□□ -2.11
LTN1-204ENST00000475344 CACNG3O60359 315 aa1.89□□□□□ -2.11
LTN1-204ENST00000475344 RDH16O75452 317 aa1.89□□□□□ -2.11
LTN1-204ENST00000475344 HPRT1P00492 218 aa1.89□□□□□ -2.11
LTN1-204ENST00000475344 HMOX2P30519 316 aa1.89□□□□□ -2.11
LTN1-204ENST00000475344 UQCRFS1P47985 274 aa1.89□□□□□ -2.11
LTN1-204ENST00000475344 ZNF121P58317 390 aaPredicted RBP1.89□□□□□ -2.11
LTN1-204ENST00000475344 C1orf185Q5T7R7 199 aa1.89□□□□□ -2.11
LTN1-204ENST00000475344 STUMQ69YW2 141 aa1.89□□□□□ -2.11
LTN1-204ENST00000475344 ADNP2Q6IQ32 1131 aa1.89□□□□□ -2.11
LTN1-204ENST00000475344 ZFP1Q6P2D0 407 aa1.89□□□□□ -2.11
LTN1-204ENST00000475344 CNPY4Q8N129 248 aa1.89□□□□□ -2.11
LTN1-204ENST00000475344 JAGN1Q8N5M9 183 aa1.89□□□□□ -2.11
LTN1-204ENST00000475344 ZFP41Q8N8Y5 198 aa1.89□□□□□ -2.11
LTN1-204ENST00000475344 C11orf72Q8NBR9 251 aa1.89□□□□□ -2.11
LTN1-204ENST00000475344 OR6N1Q8NGY5 312 aa1.89□□□□□ -2.11
LTN1-204ENST00000475344 NRGNQ92686 78 aa1.89□□□□□ -2.11
LTN1-204ENST00000475344 ECHDC3Q96DC8 303 aa1.89□□□□□ -2.11
LTN1-204ENST00000475344 BTN2A3PQ96KV6 586 aa1.89□□□□□ -2.11
LTN1-204ENST00000475344 TBL1YQ9BQ87 522 aa1.89□□□□□ -2.11
LTN1-204ENST00000475344 RSG1Q9BU20 258 aa1.89□□□□□ -2.11
LTN1-204ENST00000475344 EXO5Q9H790 373 aa1.89□□□□□ -2.11
LTN1-204ENST00000475344 EXOSC4Q9NPD3 245 aaKnown RBP1.89□□□□□ -2.11
LTN1-204ENST00000475344 C20orf96Q9NUD7 363 aaPredicted RBP1.89□□□□□ -2.11
LTN1-204ENST00000475344 CLN6Q9NWW5 311 aa1.89□□□□□ -2.11
LTN1-204ENST00000475344 GCNT4Q9P109 453 aa1.89□□□□□ -2.11
LTN1-204ENST00000475344 NSD2O96028 1365 aa1.88□□□□□ -2.11
LTN1-204ENST00000475344 IGHV3OR16-9A0A0B4J2B5 98 aa1.88□□□□□ -2.11
LTN1-204ENST00000475344 NCBP2LA6PVI3 153 aaKnown RBP1.88□□□□□ -2.11
LTN1-204ENST00000475344 H0YJW9 148 aa1.88□□□□□ -2.11
LTN1-204ENST00000475344 H7C417 338 aa1.88□□□□□ -2.11
LTN1-204ENST00000475344 K7EMT4 169 aa1.88□□□□□ -2.11
LTN1-204ENST00000475344 L7N2F9 121 aa1.88□□□□□ -2.11
LTN1-204ENST00000475344 TAAR5O14804 337 aa1.88□□□□□ -2.11
LTN1-204ENST00000475344 EIF3HO15372 352 aaKnown RBP eCLIP1.88□□□□□ -2.11
LTN1-204ENST00000475344 FLOT1O75955 427 aa1.88□□□□□ -2.11
LTN1-204ENST00000475344 CCNB2O95067 398 aa1.88□□□□□ -2.11
LTN1-204ENST00000475344 LSM8O95777 96 aaKnown RBP1.88□□□□□ -2.11
LTN1-204ENST00000475344 HBE1P02100 147 aa1.88□□□□□ -2.11
LTN1-204ENST00000475344 EIF4EP06730 217 aaKnown RBP1.88□□□□□ -2.11
LTN1-204ENST00000475344 ERCC1P07992 297 aaPredicted RBP1.88□□□□□ -2.11
LTN1-204ENST00000475344 OR8U9P0C7N5 309 aa1.88□□□□□ -2.11
LTN1-204ENST00000475344 OR1E1P30953 314 aa1.88□□□□□ -2.11
LTN1-204ENST00000475344 RBM34P42696 430 aaKnown RBP1.88□□□□□ -2.11
LTN1-204ENST00000475344 CRISP1P54107 249 aa1.88□□□□□ -2.11
LTN1-204ENST00000475344 CDKN2DP55273 166 aa1.88□□□□□ -2.11
LTN1-204ENST00000475344 GFERP55789 205 aa1.88□□□□□ -2.11
LTN1-204ENST00000475344 RPS23P62266 143 aaKnown RBP1.88□□□□□ -2.11
LTN1-204ENST00000475344 IL15RAQ13261 267 aa1.88□□□□□ -2.11
LTN1-204ENST00000475344 ART3Q13508 389 aa1.88□□□□□ -2.11
LTN1-204ENST00000475344 CUL2Q13617 745 aa1.88□□□□□ -2.11
LTN1-204ENST00000475344 RCAN2Q14206 197 aa1.88□□□□□ -2.11
LTN1-204ENST00000475344 NCF4Q15080 339 aa1.88□□□□□ -2.11
LTN1-204ENST00000475344 ALKBH6Q3KRA9 238 aa1.88□□□□□ -2.11
LTN1-204ENST00000475344 MPV17L2Q567V2 206 aa1.88□□□□□ -2.11
LTN1-204ENST00000475344 BEX5Q5H9J7 111 aa1.88□□□□□ -2.11
LTN1-204ENST00000475344 UNQ9165/PRO28630Q6UXU0 137 aa1.88□□□□□ -2.11
LTN1-204ENST00000475344 WDFY1Q8IWB7 410 aa1.88□□□□□ -2.11
LTN1-204ENST00000475344 FAM71AQ8IYT1 594 aa1.88□□□□□ -2.11
LTN1-204ENST00000475344 TMEM104Q8NE00 496 aa1.88□□□□□ -2.11
LTN1-204ENST00000475344 LRRC29Q8WV35 223 aa1.88□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 77.1 ms