RNA–Protein interactions for RNA: ENST00000474665.1

LIMD1-204, Transcript of LIM domains containing 1, humanhuman

TSL 3

Gene LIMD1, Length 513 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-204ENST00000474665 C1QTNF5Q9BXJ0 243 aa5.99□□□□□ -1.45
LIMD1-204ENST00000474665 ANKRD60Q9BZ19 345 aa5.99□□□□□ -1.45
LIMD1-204ENST00000474665 TTTY10Q9BZA0 68 aa5.99□□□□□ -1.45
LIMD1-204ENST00000474665 MRPL37Q9BZE1 423 aaKnown RBP5.99□□□□□ -1.45
LIMD1-204ENST00000474665 ZNF442Q9H7R0 627 aa5.99□□□□□ -1.45
LIMD1-204ENST00000474665 UBTD1Q9HAC8 227 aa5.99□□□□□ -1.45
LIMD1-204ENST00000474665 CDH20Q9HBT6 801 aa5.99□□□□□ -1.45
LIMD1-204ENST00000474665 CENPMQ9NSP4 180 aa5.99□□□□□ -1.45
LIMD1-204ENST00000474665 FKBP14Q9NWM8 211 aa5.99□□□□□ -1.45
LIMD1-204ENST00000474665 CLN6Q9NWW5 311 aa5.99□□□□□ -1.45
LIMD1-204ENST00000474665 UBAP1Q9NZ09 502 aa5.99□□□□□ -1.45
LIMD1-204ENST00000474665 H2AFY2Q9P0M6 372 aaPredicted RBP5.99□□□□□ -1.45
LIMD1-204ENST00000474665 MRM2Q9UI43 246 aaKnown RBP5.99□□□□□ -1.45
LIMD1-204ENST00000474665 FZR1Q9UM11 496 aa5.99□□□□□ -1.45
LIMD1-204ENST00000474665 EXOGQ9Y2C4 368 aaKnown RBP5.99□□□□□ -1.45
LIMD1-204ENST00000474665 GRIP1Q9Y3R0 1128 aa5.99□□□□□ -1.45
LIMD1-204ENST00000474665 ATP23Q9Y6H3 246 aa5.99□□□□□ -1.45
LIMD1-204ENST00000474665 HSPE1-MOB4S4R3N1 261 aa5.99□□□□□ -1.45
LIMD1-204ENST00000474665 YLPM1P49750 1951 aaKnown RBP5.98□□□□□ -1.45
LIMD1-204ENST00000474665 IGLV3-9A0A075B6K5 115 aa5.98□□□□□ -1.45
LIMD1-204ENST00000474665 ZNF878C9JN71 531 aa5.98□□□□□ -1.45
LIMD1-204ENST00000474665 M0R135 149 aa5.98□□□□□ -1.45
LIMD1-204ENST00000474665 XPNPEP2O43895 674 aa5.98□□□□□ -1.45
LIMD1-204ENST00000474665 LILRA1O75019 489 aa5.98□□□□□ -1.45
LIMD1-204ENST00000474665 TMCC2O75069 709 aa5.98□□□□□ -1.45
LIMD1-204ENST00000474665 PNPP00491 289 aa5.98□□□□□ -1.45
LIMD1-204ENST00000474665 PTHP01270 115 aa5.98□□□□□ -1.45
LIMD1-204ENST00000474665 IGHA1P01876 353 aa5.98□□□□□ -1.45
LIMD1-204ENST00000474665 LYNP07948 512 aa5.98□□□□□ -1.45
LIMD1-204ENST00000474665 OR2T7P0C7T2 308 aa5.98□□□□□ -1.45
LIMD1-204ENST00000474665 LIMS3P0CW19 117 aa5.98□□□□□ -1.45
LIMD1-204ENST00000474665 LIMS4P0CW20 117 aa5.98□□□□□ -1.45
LIMD1-204ENST00000474665 ZNF250P15622 560 aa5.98□□□□□ -1.45
LIMD1-204ENST00000474665 APOBEC3AP31941 199 aaPredicted RBP5.98□□□□□ -1.45
LIMD1-204ENST00000474665 SERPINF1P36955 418 aa5.98□□□□□ -1.45
LIMD1-204ENST00000474665 PRSS12P56730 875 aa5.98□□□□□ -1.45
LIMD1-204ENST00000474665 CXCR4P61073 352 aa5.98□□□□□ -1.45
LIMD1-204ENST00000474665 PPP1CBP62140 327 aa5.98□□□□□ -1.45
LIMD1-204ENST00000474665 MFGE8Q08431 387 aaPredicted RBP5.98□□□□□ -1.45
LIMD1-204ENST00000474665 TNK1Q13470 666 aa5.98□□□□□ -1.45
LIMD1-204ENST00000474665 HLXQ14774 488 aaPredicted RBP5.98□□□□□ -1.45
LIMD1-204ENST00000474665 EFNB3Q15768 340 aa5.98□□□□□ -1.45
LIMD1-204ENST00000474665 SNAI3Q3KNW1 292 aa5.98□□□□□ -1.45
LIMD1-204ENST00000474665 C6orf141Q5SZD1 244 aa5.98□□□□□ -1.45
LIMD1-204ENST00000474665 ZNF544Q6NX49 715 aa5.98□□□□□ -1.45
LIMD1-204ENST00000474665 VHLLQ6RSH7 139 aa5.98□□□□□ -1.45
LIMD1-204ENST00000474665 ZNF322Q6U7Q0 402 aaPredicted RBP5.98□□□□□ -1.45
LIMD1-204ENST00000474665 PLEKHG7Q6ZR37 379 aa5.98□□□□□ -1.45
LIMD1-204ENST00000474665 C8orf59Q8N0T1 100 aaPredicted RBP5.98□□□□□ -1.45
LIMD1-204ENST00000474665 ZCCHC24Q8N2G6 241 aaKnown RBP5.98□□□□□ -1.45
LIMD1-204ENST00000474665 OR10H4Q8NGA5 316 aa5.98□□□□□ -1.45
LIMD1-204ENST00000474665 OR52I1Q8NGK6 324 aa5.98□□□□□ -1.45
LIMD1-204ENST00000474665 OR1J2Q8NGS2 313 aa5.98□□□□□ -1.45
LIMD1-204ENST00000474665 OR2T27Q8NH04 317 aa5.98□□□□□ -1.45
LIMD1-204ENST00000474665 ABHD4Q8TB40 342 aa5.98□□□□□ -1.45
LIMD1-204ENST00000474665 SLC25A40Q8TBP6 338 aa5.98□□□□□ -1.45
LIMD1-204ENST00000474665 KLF14Q8TD94 323 aaPredicted RBP5.98□□□□□ -1.45
LIMD1-204ENST00000474665 GTF3AQ92664 365 aaKnown RBP5.98□□□□□ -1.45
LIMD1-204ENST00000474665 GGHQ92820 318 aa5.98□□□□□ -1.45
LIMD1-204ENST00000474665 RFKQ969G6 155 aa5.98□□□□□ -1.45
LIMD1-204ENST00000474665 FBXW5Q969U6 566 aa5.98□□□□□ -1.45
LIMD1-204ENST00000474665 MRPL24Q96A35 216 aaKnown RBP5.98□□□□□ -1.45
LIMD1-204ENST00000474665 ZNF799Q96GE5 643 aa5.98□□□□□ -1.45
LIMD1-204ENST00000474665 OR8B4Q96RC9 309 aa5.98□□□□□ -1.45
LIMD1-204ENST00000474665 SIGLEC11Q96RL6 698 aa5.98□□□□□ -1.45
LIMD1-204ENST00000474665 DOK1Q99704 481 aa5.98□□□□□ -1.45
LIMD1-204ENST00000474665 KCNJ15Q99712 375 aa5.98□□□□□ -1.45
LIMD1-204ENST00000474665 COPS4Q9BT78 406 aa5.98□□□□□ -1.45
LIMD1-204ENST00000474665 SOX7Q9BT81 388 aa5.98□□□□□ -1.45
LIMD1-204ENST00000474665 TRAF4Q9BUZ4 470 aaPredicted RBP5.98□□□□□ -1.45
LIMD1-204ENST00000474665 OR2J1Q9GZK6 312 aa5.98□□□□□ -1.45
LIMD1-204ENST00000474665 VCXQ9H320 206 aa5.98□□□□□ -1.45
LIMD1-204ENST00000474665 PLK3Q9H4B4 646 aa5.98□□□□□ -1.45
LIMD1-204ENST00000474665 ELOVL3Q9HB03 270 aa5.98□□□□□ -1.45
LIMD1-204ENST00000474665 FGF20Q9NP95 211 aaPredicted RBP5.98□□□□□ -1.45
LIMD1-204ENST00000474665 PLCXD1Q9NUJ7 323 aa5.98□□□□□ -1.45
LIMD1-204ENST00000474665 TBCCD1Q9NVR7 557 aa5.98□□□□□ -1.45
LIMD1-204ENST00000474665 PAK1IP1Q9NWT1 392 aaPredicted RBP5.98□□□□□ -1.45
LIMD1-204ENST00000474665 FAM206AQ9NX38 181 aa5.98□□□□□ -1.45
LIMD1-204ENST00000474665 LAMP5Q9UJQ1 280 aa5.98□□□□□ -1.45
LIMD1-204ENST00000474665 POU2F3Q9UKI9 436 aa5.98□□□□□ -1.45
LIMD1-204ENST00000474665 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP5.98□□□□□ -1.45
LIMD1-204ENST00000474665 LRP12Q9Y561 859 aa5.98□□□□□ -1.45
LIMD1-204ENST00000474665 MALRD1Q5VYJ5 2156 aa5.97□□□□□ -1.45
LIMD1-204ENST00000474665 ARHGAP32A7KAX9 2087 aa5.97□□□□□ -1.45
LIMD1-204ENST00000474665 DYSFO75923 2080 aa5.97□□□□□ -1.45
LIMD1-204ENST00000474665 DOCK11Q5JSL3 2073 aa5.97□□□□□ -1.45
LIMD1-204ENST00000474665 TRIM64A6NGJ6 449 aa5.97□□□□□ -1.45
LIMD1-204ENST00000474665 TRIM64BA6NI03 449 aa5.97□□□□□ -1.45
LIMD1-204ENST00000474665 DENRO43583 198 aaKnown RBP5.97□□□□□ -1.45
LIMD1-204ENST00000474665 FAM20BO75063 409 aa5.97□□□□□ -1.45
LIMD1-204ENST00000474665 NDUFS7O75251 213 aa5.97□□□□□ -1.45
LIMD1-204ENST00000474665 LCKP06239 509 aa5.97□□□□□ -1.45
LIMD1-204ENST00000474665 C21orf33P30042 268 aaPredicted RBP5.97□□□□□ -1.45
LIMD1-204ENST00000474665 RAD52P43351 418 aa5.97□□□□□ -1.45
LIMD1-204ENST00000474665 CX3CR1P49238 355 aa5.97□□□□□ -1.45
LIMD1-204ENST00000474665 ETV1P50549 477 aa5.97□□□□□ -1.45
LIMD1-204ENST00000474665 FABP6P51161 128 aa5.97□□□□□ -1.45
LIMD1-204ENST00000474665 OR12D2P58182 307 aa5.97□□□□□ -1.45
LIMD1-204ENST00000474665 ZNF121P58317 390 aaPredicted RBP5.97□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms