RNA–Protein interactions for RNA: ENST00000474426.1

UBR3-208, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 1 (best)

Gene UBR3, Length 4,066 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-208ENST00000474426 OR1S1Q8NH92 325 aa3.08□□□□□ -1.92
UBR3-208ENST00000474426 THAP6Q8TBB0 222 aa3.08□□□□□ -1.92
UBR3-208ENST00000474426 KCTD7Q96MP8 289 aa3.08□□□□□ -1.92
UBR3-208ENST00000474426 NSUN5Q96P11 429 aaKnown RBP3.08□□□□□ -1.92
UBR3-208ENST00000474426 RNF157Q96PX1 679 aa3.08□□□□□ -1.92
UBR3-208ENST00000474426 OR2M4Q96R27 311 aa3.08□□□□□ -1.92
UBR3-208ENST00000474426 KCTD15Q96SI1 283 aaPredicted RBP3.08□□□□□ -1.92
UBR3-208ENST00000474426 MRPL57Q9BQC6 102 aaKnown RBP3.08□□□□□ -1.92
UBR3-208ENST00000474426 NDFIP1Q9BT67 221 aa3.08□□□□□ -1.92
UBR3-208ENST00000474426 C1QTNF5Q9BXJ0 243 aa3.08□□□□□ -1.92
UBR3-208ENST00000474426 TXNIPQ9H3M7 391 aa3.08□□□□□ -1.92
UBR3-208ENST00000474426 IL21Q9HBE4 155 aa3.08□□□□□ -1.92
UBR3-208ENST00000474426 MRPS18AQ9NVS2 196 aaKnown RBP3.08□□□□□ -1.92
UBR3-208ENST00000474426 B4GALT7Q9UBV7 327 aa3.08□□□□□ -1.92
UBR3-208ENST00000474426 A4GNTQ9UNA3 340 aa3.08□□□□□ -1.92
UBR3-208ENST00000474426 EXO1Q9UQ84 846 aaKnown RBP3.08□□□□□ -1.92
UBR3-208ENST00000474426 POLDIP2Q9Y2S7 368 aa3.08□□□□□ -1.92
UBR3-208ENST00000474426 V9GYS6 101 aa3.08□□□□□ -1.92
UBR3-208ENST00000474426 ARHGEF12Q9NZN5 1544 aa3.08□□□□□ -1.92
UBR3-208ENST00000474426 TRPM3Q9HCF6 1732 aaPredicted RBP3.08□□□□□ -1.92
UBR3-208ENST00000474426 A0A1B0GTI1 187 aa3.08□□□□□ -1.92
UBR3-208ENST00000474426 OR5H1A6NKK0 313 aa3.08□□□□□ -1.92
UBR3-208ENST00000474426 ORC5O43913 435 aa3.08□□□□□ -1.92
UBR3-208ENST00000474426 TPST2O60704 377 aa3.08□□□□□ -1.92
UBR3-208ENST00000474426 ZNF432O94892 652 aa3.08□□□□□ -1.92
UBR3-208ENST00000474426 GIPP09681 153 aaPredicted RBP3.08□□□□□ -1.92
UBR3-208ENST00000474426 HSD17B1P14061 328 aa3.08□□□□□ -1.92
UBR3-208ENST00000474426 CD33P20138 364 aa3.08□□□□□ -1.92
UBR3-208ENST00000474426 SHC1P29353 583 aa3.08□□□□□ -1.92
UBR3-208ENST00000474426 RABGGTBP53611 331 aa3.08□□□□□ -1.92
UBR3-208ENST00000474426 RAB38P57729 211 aa3.08□□□□□ -1.92
UBR3-208ENST00000474426 OC90Q02509 493 aaPredicted RBP3.08□□□□□ -1.92
UBR3-208ENST00000474426 PEA15Q15121 130 aa3.08□□□□□ -1.92
UBR3-208ENST00000474426 TESK1Q15569 626 aa3.08□□□□□ -1.92
UBR3-208ENST00000474426 SLC25A47Q6Q0C1 308 aa3.08□□□□□ -1.92
UBR3-208ENST00000474426 FAM19A1Q7Z5A9 133 aa3.08□□□□□ -1.92
UBR3-208ENST00000474426 ZNF784Q8NCA9 323 aaPredicted RBP3.08□□□□□ -1.92
UBR3-208ENST00000474426 REPS2Q8NFH8 660 aa3.08□□□□□ -1.92
UBR3-208ENST00000474426 OR4K1Q8NGD4 311 aa3.08□□□□□ -1.92
UBR3-208ENST00000474426 OR51Q1Q8NH59 317 aa3.08□□□□□ -1.92
UBR3-208ENST00000474426 RNF183Q96D59 192 aa3.08□□□□□ -1.92
UBR3-208ENST00000474426 CENPNQ96H22 339 aaPredicted RBP3.08□□□□□ -1.92
UBR3-208ENST00000474426 GPR82Q96P67 336 aa3.08□□□□□ -1.92
UBR3-208ENST00000474426 OR5B12Q96R08 314 aa3.08□□□□□ -1.92
UBR3-208ENST00000474426 PAAF1Q9BRP4 392 aa3.08□□□□□ -1.92
UBR3-208ENST00000474426 FAM96AQ9H5X1 160 aa3.08□□□□□ -1.92
UBR3-208ENST00000474426 BARX1Q9HBU1 254 aaPredicted RBP3.08□□□□□ -1.92
UBR3-208ENST00000474426 ABHD10Q9NUJ1 306 aa3.08□□□□□ -1.92
UBR3-208ENST00000474426 WSB1Q9Y6I7 421 aa3.08□□□□□ -1.92
UBR3-208ENST00000474426 MYH8P13535 1937 aa3.08□□□□□ -1.92
UBR3-208ENST00000474426 CITO14578 2027 aa3.08□□□□□ -1.92
UBR3-208ENST00000474426 CNTNAP5Q8WYK1 1306 aa3.08□□□□□ -1.92
UBR3-208ENST00000474426 TMEM269A0A1B0GVZ9 245 aa3.08□□□□□ -1.92
UBR3-208ENST00000474426 LRRC3CA6NJW4 275 aa3.08□□□□□ -1.92
UBR3-208ENST00000474426 C2CD4BA6NLJ0 364 aa3.08□□□□□ -1.92
UBR3-208ENST00000474426 NPIPB6E9PJ23 425 aa3.08□□□□□ -1.92
UBR3-208ENST00000474426 SLC17A3O00476 420 aa3.08□□□□□ -1.92
UBR3-208ENST00000474426 LILRA1O75019 489 aa3.08□□□□□ -1.92
UBR3-208ENST00000474426 TTLL1O95922 423 aa3.08□□□□□ -1.92
UBR3-208ENST00000474426 UCHL1P09936 223 aa3.08□□□□□ -1.92
UBR3-208ENST00000474426 ABOP16442 354 aa3.08□□□□□ -1.92
UBR3-208ENST00000474426 CELP19835 753 aa3.08□□□□□ -1.92
UBR3-208ENST00000474426 TMEM50BP56557 158 aa3.08□□□□□ -1.92
UBR3-208ENST00000474426 PIGPP57054 158 aa3.08□□□□□ -1.92
UBR3-208ENST00000474426 BTG1P62324 171 aa3.08□□□□□ -1.92
UBR3-208ENST00000474426 PITX1P78337 314 aaPredicted RBP3.08□□□□□ -1.92
UBR3-208ENST00000474426 BTN3A2P78410 334 aa3.08□□□□□ -1.92
UBR3-208ENST00000474426 RUNX1Q01196 453 aa3.08□□□□□ -1.92
UBR3-208ENST00000474426 FOXL1Q12952 345 aa3.08□□□□□ -1.92
UBR3-208ENST00000474426 EBPQ15125 230 aaKnown RBP3.08□□□□□ -1.92
UBR3-208ENST00000474426 TMEM241Q24JQ0 296 aa3.08□□□□□ -1.92
UBR3-208ENST00000474426 ELOA3BQ3SY89 546 aa3.08□□□□□ -1.92
UBR3-208ENST00000474426 ZNF404Q494X3 552 aa3.08□□□□□ -1.92
UBR3-208ENST00000474426 TMEM200BQ69YZ2 307 aa3.08□□□□□ -1.92
UBR3-208ENST00000474426 CROCCP2Q86T23 111 aa3.08□□□□□ -1.92
UBR3-208ENST00000474426 UMODL1-AS1Q8N2C9 162 aa3.08□□□□□ -1.92
UBR3-208ENST00000474426 ELOA3Q8NG57 546 aa3.08□□□□□ -1.92
UBR3-208ENST00000474426 OR4N2Q8NGD1 307 aa3.08□□□□□ -1.92
UBR3-208ENST00000474426 OR10V1Q8NGI7 309 aa3.08□□□□□ -1.92
UBR3-208ENST00000474426 SFXN5Q8TD22 340 aa3.08□□□□□ -1.92
UBR3-208ENST00000474426 ZNF431Q8TF32 576 aaPredicted RBP3.08□□□□□ -1.92
UBR3-208ENST00000474426 FCAMRQ8WWV6 532 aa3.08□□□□□ -1.92
UBR3-208ENST00000474426 SCAMP4Q969E2 229 aa3.08□□□□□ -1.92
UBR3-208ENST00000474426 MRPL53Q96EL3 112 aaKnown RBP3.08□□□□□ -1.92
UBR3-208ENST00000474426 UHRF2Q96PU4 802 aa3.08□□□□□ -1.92
UBR3-208ENST00000474426 TRIB3Q96RU7 358 aa3.08□□□□□ -1.92
UBR3-208ENST00000474426 SEPHS2Q99611 448 aa3.08□□□□□ -1.92
UBR3-208ENST00000474426 SLIRPQ9GZT3 109 aaKnown RBP3.08□□□□□ -1.92
UBR3-208ENST00000474426 WDCPQ9H6R7 721 aa3.08□□□□□ -1.92
UBR3-208ENST00000474426 UBQLN4Q9NRR5 601 aa3.08□□□□□ -1.92
UBR3-208ENST00000474426 CLN6Q9NWW5 311 aa3.08□□□□□ -1.92
UBR3-208ENST00000474426 CDC42EP3Q9UKI2 254 aa3.08□□□□□ -1.92
UBR3-208ENST00000474426 COX11Q9Y6N1 276 aa3.08□□□□□ -1.92
UBR3-208ENST00000474426 CHD3Q12873 2000 aaKnown RBP3.08□□□□□ -1.92
UBR3-208ENST00000474426 DCCP43146 1447 aa3.07□□□□□ -1.92
UBR3-208ENST00000474426 ANKUB1A6NFN9 424 aa3.07□□□□□ -1.92
UBR3-208ENST00000474426 NPIPB5A8MRT5 1133 aa3.07□□□□□ -1.92
UBR3-208ENST00000474426 DVL1O14640 695 aa3.07□□□□□ -1.92
UBR3-208ENST00000474426 ATP6AP2O75787 350 aa3.07□□□□□ -1.92
UBR3-208ENST00000474426 ZNF14P17017 642 aaPredicted RBP3.07□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms