RNA–Protein interactions for RNA: ENST00000472490.1

BRCA1-211, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 3

Gene BRCA1, Length 561 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-211ENST00000472490 TRIM64BA6NI03 449 aa12.13□□□□□ -0.47
BRCA1-211ENST00000472490 H7C1Q1 480 aa12.13□□□□□ -0.47
BRCA1-211ENST00000472490 M0R129 80 aa12.13□□□□□ -0.47
BRCA1-211ENST00000472490 TPD52L2O43399 206 aaKnown RBP12.13□□□□□ -0.47
BRCA1-211ENST00000472490 ALOX5APP20292 161 aa12.13□□□□□ -0.47
BRCA1-211ENST00000472490 TNFSF4P23510 183 aa12.13□□□□□ -0.47
BRCA1-211ENST00000472490 HTR1FP30939 366 aa12.13□□□□□ -0.47
BRCA1-211ENST00000472490 OPRL1P41146 370 aa12.13□□□□□ -0.47
BRCA1-211ENST00000472490 PRKXP51817 358 aa12.13□□□□□ -0.47
BRCA1-211ENST00000472490 CARTPTQ16568 116 aa12.13□□□□□ -0.47
BRCA1-211ENST00000472490 SLC25A30Q5SVS4 291 aa12.13□□□□□ -0.47
BRCA1-211ENST00000472490 PGAP1Q75T13 922 aa12.13□□□□□ -0.47
BRCA1-211ENST00000472490 SPATC1Q76KD6 591 aa12.13□□□□□ -0.47
BRCA1-211ENST00000472490 MRPL21Q7Z2W9 205 aaKnown RBP12.13□□□□□ -0.47
BRCA1-211ENST00000472490 KRT77Q7Z794 578 aa12.13□□□□□ -0.47
BRCA1-211ENST00000472490 ZNF786Q8N393 782 aa12.13□□□□□ -0.47
BRCA1-211ENST00000472490 OR52H1Q8NGJ2 320 aa12.13□□□□□ -0.47
BRCA1-211ENST00000472490 RDH5Q92781 318 aa12.13□□□□□ -0.47
BRCA1-211ENST00000472490 SLC29A1Q99808 456 aa12.13□□□□□ -0.47
BRCA1-211ENST00000472490 PIMREGQ9BSJ6 248 aa12.13□□□□□ -0.47
BRCA1-211ENST00000472490 VCXQ9H320 206 aa12.13□□□□□ -0.47
BRCA1-211ENST00000472490 SMPD3Q9NY59 655 aaPredicted RBP12.13□□□□□ -0.47
BRCA1-211ENST00000472490 CREBBPQ92793 2442 aa12.12□□□□□ -0.47
BRCA1-211ENST00000472490 LOC100130705A0A1B0GUX0 176 aa12.12□□□□□ -0.47
BRCA1-211ENST00000472490 XRCC2O43543 280 aa12.12□□□□□ -0.47
BRCA1-211ENST00000472490 SPRY3O43610 288 aa12.12□□□□□ -0.47
BRCA1-211ENST00000472490 ZNF254O75437 659 aa12.12□□□□□ -0.47
BRCA1-211ENST00000472490 LY6HO94772 140 aa12.12□□□□□ -0.47
BRCA1-211ENST00000472490 ANXA2P07355 339 aaKnown RBP12.12□□□□□ -0.47
BRCA1-211ENST00000472490 ADH4P08319 380 aa12.12□□□□□ -0.47
BRCA1-211ENST00000472490 MRPL3P09001 348 aaKnown RBP12.12□□□□□ -0.47
BRCA1-211ENST00000472490 INHBBP09529 407 aa12.12□□□□□ -0.47
BRCA1-211ENST00000472490 CFL1P23528 166 aaKnown RBP12.12□□□□□ -0.47
BRCA1-211ENST00000472490 CX3CR1P49238 355 aa12.12□□□□□ -0.47
BRCA1-211ENST00000472490 SNRPGP62308 76 aaKnown RBP12.12□□□□□ -0.47
BRCA1-211ENST00000472490 BCDIN3DQ7Z5W3 292 aaKnown RBP12.12□□□□□ -0.47
BRCA1-211ENST00000472490 NAA40Q86UY6 237 aa12.12□□□□□ -0.47
BRCA1-211ENST00000472490 C10orf105Q8TEF2 133 aa12.12□□□□□ -0.47
BRCA1-211ENST00000472490 COX4I2Q96KJ9 171 aa12.12□□□□□ -0.47
BRCA1-211ENST00000472490 Q96MT0 163 aa12.12□□□□□ -0.47
BRCA1-211ENST00000472490 MBOAT4Q96T53 435 aa12.12□□□□□ -0.47
BRCA1-211ENST00000472490 APOL4Q9BPW4 351 aa12.12□□□□□ -0.47
BRCA1-211ENST00000472490 REG4Q9BYZ8 158 aa12.12□□□□□ -0.47
BRCA1-211ENST00000472490 POFUT1Q9H488 388 aa12.12□□□□□ -0.47
BRCA1-211ENST00000472490 SAP30LQ9HAJ7 183 aa12.12□□□□□ -0.47
BRCA1-211ENST00000472490 DLL4Q9NR61 685 aa12.12□□□□□ -0.47
BRCA1-211ENST00000472490 NOP16Q9Y3C1 178 aaKnown RBP12.12□□□□□ -0.47
BRCA1-211ENST00000472490 IQCF6A8MYZ5 107 aa12.11□□□□□ -0.47
BRCA1-211ENST00000472490 RNF223E7ERA6 249 aa12.11□□□□□ -0.47
BRCA1-211ENST00000472490 ZNF670-ZNF695F2Z2N8 137 aa12.11□□□□□ -0.47
BRCA1-211ENST00000472490 IGHV1-46P01743 117 aa12.11□□□□□ -0.47
BRCA1-211ENST00000472490 SBK2P0C263 348 aa12.11□□□□□ -0.47
BRCA1-211ENST00000472490 ACHEP22303 614 aa12.11□□□□□ -0.47
BRCA1-211ENST00000472490 DCTDP32321 178 aa12.11□□□□□ -0.47
BRCA1-211ENST00000472490 MAGEB1P43366 347 aa12.11□□□□□ -0.47
BRCA1-211ENST00000472490 ELF3P78545 371 aaPredicted RBP12.11□□□□□ -0.47
BRCA1-211ENST00000472490 CCL8P80075 99 aa12.11□□□□□ -0.47
BRCA1-211ENST00000472490 ROM1Q03395 351 aa12.11□□□□□ -0.47
BRCA1-211ENST00000472490 GK2Q14410 553 aaPredicted RBP12.11□□□□□ -0.47
BRCA1-211ENST00000472490 HLXQ14774 488 aaPredicted RBP12.11□□□□□ -0.47
BRCA1-211ENST00000472490 OCLNQ16625 522 aa12.11□□□□□ -0.47
BRCA1-211ENST00000472490 LRRC36Q1X8D7 754 aa12.11□□□□□ -0.47
BRCA1-211ENST00000472490 SNAI3Q3KNW1 292 aa12.11□□□□□ -0.47
BRCA1-211ENST00000472490 USP51Q70EK9 711 aa12.11□□□□□ -0.47
BRCA1-211ENST00000472490 BIVMQ86UB2 503 aa12.11□□□□□ -0.47
BRCA1-211ENST00000472490 LURAP1LQ8IV03 231 aa12.11□□□□□ -0.47
BRCA1-211ENST00000472490 SLC35F2Q8IXU6 374 aa12.11□□□□□ -0.47
BRCA1-211ENST00000472490 ZNF679Q8IYX0 411 aa12.11□□□□□ -0.47
BRCA1-211ENST00000472490 GALNT4Q8N4A0 578 aa12.11□□□□□ -0.47
BRCA1-211ENST00000472490 OR8G5Q8NG78 346 aa12.11□□□□□ -0.47
BRCA1-211ENST00000472490 OR51G2Q8NGK0 314 aa12.11□□□□□ -0.47
BRCA1-211ENST00000472490 OR13G1Q8NGZ3 307 aa12.11□□□□□ -0.47
BRCA1-211ENST00000472490 SPRYD4Q8WW59 207 aaPredicted RBP12.11□□□□□ -0.47
BRCA1-211ENST00000472490 SLC22A4Q9H015 551 aa12.11□□□□□ -0.47
BRCA1-211ENST00000472490 OR10A2Q9H208 303 aa12.11□□□□□ -0.47
BRCA1-211ENST00000472490 RGCCQ9H4X1 137 aa12.11□□□□□ -0.47
BRCA1-211ENST00000472490 CHODLQ9H9P2 273 aa12.11□□□□□ -0.47
BRCA1-211ENST00000472490 ADGRL4Q9HBW9 690 aa12.11□□□□□ -0.47
BRCA1-211ENST00000472490 FAM118AQ9NWS6 357 aa12.11□□□□□ -0.47
BRCA1-211ENST00000472490 CLN6Q9NWW5 311 aa12.11□□□□□ -0.47
BRCA1-211ENST00000472490 N6AMT1Q9Y5N5 214 aa12.11□□□□□ -0.47
BRCA1-211ENST00000472490 OTOGQ6ZRI0 2925 aa12.11□□□□□ -0.47
BRCA1-211ENST00000472490 ROS1P08922 2347 aa12.11□□□□□ -0.47
BRCA1-211ENST00000472490 AKAP6Q13023 2319 aa12.11□□□□□ -0.47
BRCA1-211ENST00000472490 HEATR1Q9H583 2144 aaKnown RBP12.11□□□□□ -0.47
BRCA1-211ENST00000472490 IGHV4-30-2A0A087WSY4 118 aa12.1□□□□□ -0.47
BRCA1-211ENST00000472490 IGHV1-69-2A0A0G2JMI3 117 aa12.1□□□□□ -0.47
BRCA1-211ENST00000472490 ZSCAN5BA6NJL1 495 aa12.1□□□□□ -0.47
BRCA1-211ENST00000472490 E9PQ18 207 aa12.1□□□□□ -0.47
BRCA1-211ENST00000472490 H0YHG0 523 aa12.1□□□□□ -0.47
BRCA1-211ENST00000472490 SLC16A6O15403 523 aa12.1□□□□□ -0.47
BRCA1-211ENST00000472490 TBX1O43435 398 aa12.1□□□□□ -0.47
BRCA1-211ENST00000472490 HPXP02790 462 aa12.1□□□□□ -0.47
BRCA1-211ENST00000472490 CD55P08174 381 aa12.1□□□□□ -0.47
BRCA1-211ENST00000472490 OR2T7P0C7T2 308 aa12.1□□□□□ -0.47
BRCA1-211ENST00000472490 TNFRSF1AP19438 455 aa12.1□□□□□ -0.47
BRCA1-211ENST00000472490 GIFP27352 417 aa12.1□□□□□ -0.47
BRCA1-211ENST00000472490 DDOSTP39656 456 aa12.1□□□□□ -0.47
BRCA1-211ENST00000472490 MTNR1AP48039 350 aa12.1□□□□□ -0.47
BRCA1-211ENST00000472490 TMEM33P57088 247 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms