RNA–Protein interactions for RNA: ENST00000469565.6

LMNA-210, Transcript of lamin A/C, human

TSL 4

Gene LMNA, Length 591 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LMNA-210	ENST00000469565	PTTG3P	Q9NZH4	202 aa		11.75	□□□□□ -0.53
LMNA-210	ENST00000469565	PSORS1C1	Q9UIG5	152 aa		11.75	□□□□□ -0.53
LMNA-210	ENST00000469565	GNG8	Q9UK08	70 aa		11.75	□□□□□ -0.53
LMNA-210	ENST00000469565	GTF2A1L	Q9UNN4	478 aa		11.75	□□□□□ -0.53
LMNA-210	ENST00000469565	STARD10	Q9Y365	291 aa		11.75	□□□□□ -0.53
LMNA-210	ENST00000469565	CMAHP	Q9Y471	501 aa		11.75	□□□□□ -0.53
LMNA-210	ENST00000469565	PCDHGB5	Q9Y5G0	923 aa		11.75	□□□□□ -0.53
LMNA-210	ENST00000469565	NAV3	Q8IVL0	2385 aa		11.75	□□□□□ -0.53
LMNA-210	ENST00000469565	RAI1	Q7Z5J4	1906 aa	Predicted RBP	11.74	□□□□□ -0.53
LMNA-210	ENST00000469565	ARFGEF3	Q5TH69	2177 aa		11.74	□□□□□ -0.53
LMNA-210	ENST00000469565	METTL15	A6NJ78	407 aa		11.74	□□□□□ -0.53
LMNA-210	ENST00000469565		J3QLW9	94 aa		11.74	□□□□□ -0.53
LMNA-210	ENST00000469565		J3QRE1	110 aa		11.74	□□□□□ -0.53
LMNA-210	ENST00000469565	ZNF254	O75437	659 aa		11.74	□□□□□ -0.53
LMNA-210	ENST00000469565	ATE1	O95260	518 aa		11.74	□□□□□ -0.53
LMNA-210	ENST00000469565	APOC1	P02654	83 aa		11.74	□□□□□ -0.53
LMNA-210	ENST00000469565	OR4A8	P0C604	315 aa		11.74	□□□□□ -0.53
LMNA-210	ENST00000469565	ZNF19	P17023	458 aa		11.74	□□□□□ -0.53
LMNA-210	ENST00000469565	MYL12A	P19105	171 aa		11.74	□□□□□ -0.53
LMNA-210	ENST00000469565	DCK	P27707	260 aa		11.74	□□□□□ -0.53
LMNA-210	ENST00000469565	GCH1	P30793	250 aa		11.74	□□□□□ -0.53
LMNA-210	ENST00000469565	RGS6	P49758	472 aa		11.74	□□□□□ -0.53
LMNA-210	ENST00000469565	ZNF121	P58317	390 aa	Predicted RBP	11.74	□□□□□ -0.53
LMNA-210	ENST00000469565	NKX6-1	P78426	367 aa	Predicted RBP	11.74	□□□□□ -0.53
LMNA-210	ENST00000469565	MED21	Q13503	144 aa		11.74	□□□□□ -0.53
LMNA-210	ENST00000469565	GALE	Q14376	348 aa		11.74	□□□□□ -0.53
LMNA-210	ENST00000469565	KRTAP27-1	Q3LI81	207 aa		11.74	□□□□□ -0.53
LMNA-210	ENST00000469565	ZNF718	Q3SXZ3	478 aa		11.74	□□□□□ -0.53
LMNA-210	ENST00000469565	DEGS2	Q6QHC5	323 aa		11.74	□□□□□ -0.53
LMNA-210	ENST00000469565	RFPL4B	Q6ZWI9	263 aa		11.74	□□□□□ -0.53
LMNA-210	ENST00000469565	FAM220A	Q7Z4H9	259 aa		11.74	□□□□□ -0.53
LMNA-210	ENST00000469565	IPCEF1	Q8WWN9	437 aa	Predicted RBP	11.74	□□□□□ -0.53
LMNA-210	ENST00000469565	NRGN	Q92686	78 aa		11.74	□□□□□ -0.53
LMNA-210	ENST00000469565	PGAM5	Q96HS1	289 aa		11.74	□□□□□ -0.53
LMNA-210	ENST00000469565	MYCBP	Q99417	103 aa	Predicted RBP	11.74	□□□□□ -0.53
LMNA-210	ENST00000469565	DOK1	Q99704	481 aa		11.74	□□□□□ -0.53
LMNA-210	ENST00000469565	ALG8	Q9BVK2	526 aa		11.74	□□□□□ -0.53
LMNA-210	ENST00000469565	OR2J1	Q9GZK6	312 aa		11.74	□□□□□ -0.53
LMNA-210	ENST00000469565	NIPAL2	Q9H841	368 aa		11.74	□□□□□ -0.53
LMNA-210	ENST00000469565	PLEKHF2	Q9H8W4	249 aa		11.74	□□□□□ -0.53
LMNA-210	ENST00000469565	FGF20	Q9NP95	211 aa	Predicted RBP	11.74	□□□□□ -0.53
LMNA-210	ENST00000469565	ERVK13-1	Q9NX77	482 aa		11.74	□□□□□ -0.53
LMNA-210	ENST00000469565	MRM2	Q9UI43	246 aa	Known RBP	11.74	□□□□□ -0.53
LMNA-210	ENST00000469565	DUSP13	Q9UII6	198 aa		11.74	□□□□□ -0.53
LMNA-210	ENST00000469565	TPRKB	Q9Y3C4	175 aa		11.74	□□□□□ -0.53
LMNA-210	ENST00000469565	TMEM269	A0A1B0GVZ9	245 aa		11.73	□□□□□ -0.53
LMNA-210	ENST00000469565	TACSTD2	P09758	323 aa		11.73	□□□□□ -0.53
LMNA-210	ENST00000469565	OTX1	P32242	354 aa	Predicted RBP	11.73	□□□□□ -0.53
LMNA-210	ENST00000469565	TTK	P33981	857 aa		11.73	□□□□□ -0.53
LMNA-210	ENST00000469565	SERPINF1	P36955	418 aa		11.73	□□□□□ -0.53
LMNA-210	ENST00000469565	OR12D2	P58182	307 aa		11.73	□□□□□ -0.53
LMNA-210	ENST00000469565	SELENOV	P59797	346 aa		11.73	□□□□□ -0.53
LMNA-210	ENST00000469565	ROM1	Q03395	351 aa		11.73	□□□□□ -0.53
LMNA-210	ENST00000469565	MVK	Q03426	396 aa		11.73	□□□□□ -0.53
LMNA-210	ENST00000469565	GFOD2	Q3B7J2	385 aa		11.73	□□□□□ -0.53
LMNA-210	ENST00000469565	ZNF829	Q3KNS6	432 aa	Predicted RBP	11.73	□□□□□ -0.53
LMNA-210	ENST00000469565	SNAI3	Q3KNW1	292 aa		11.73	□□□□□ -0.53
LMNA-210	ENST00000469565	AGAP6	Q5VW22	663 aa		11.73	□□□□□ -0.53
LMNA-210	ENST00000469565	NIPBL	Q6KC79	2804 aa	eCLIP	11.73	□□□□□ -0.53	5e-6	■■■■□ 20.4
LMNA-210	ENST00000469565	ZNF544	Q6NX49	715 aa		11.73	□□□□□ -0.53
LMNA-210	ENST00000469565	MUC15	Q8N387	334 aa		11.73	□□□□□ -0.53
LMNA-210	ENST00000469565	SYNPR	Q8TBG9	265 aa		11.73	□□□□□ -0.53
LMNA-210	ENST00000469565	TMEM171	Q8WVE6	324 aa		11.73	□□□□□ -0.53
LMNA-210	ENST00000469565	MYDGF	Q969H8	173 aa		11.73	□□□□□ -0.53
LMNA-210	ENST00000469565	C4orf36	Q96KX1	117 aa		11.73	□□□□□ -0.53
LMNA-210	ENST00000469565	COG8	Q96MW5	612 aa		11.73	□□□□□ -0.53
LMNA-210	ENST00000469565	SYT3	Q9BQG1	590 aa		11.73	□□□□□ -0.53
LMNA-210	ENST00000469565	C1QTNF5	Q9BXJ0	243 aa		11.73	□□□□□ -0.53
LMNA-210	ENST00000469565	LIME1	Q9H400	295 aa		11.73	□□□□□ -0.53
LMNA-210	ENST00000469565	POFUT1	Q9H488	388 aa		11.73	□□□□□ -0.53
LMNA-210	ENST00000469565	ZNF442	Q9H7R0	627 aa		11.73	□□□□□ -0.53
LMNA-210	ENST00000469565	SP140L	Q9H930	580 aa		11.73	□□□□□ -0.53
LMNA-210	ENST00000469565	INPP5E	Q9NRR6	644 aa		11.73	□□□□□ -0.53
LMNA-210	ENST00000469565	FAIM	Q9NVQ4	179 aa		11.73	□□□□□ -0.53
LMNA-210	ENST00000469565	UBAP1	Q9NZ09	502 aa		11.73	□□□□□ -0.53
LMNA-210	ENST00000469565	CNOT2	Q9NZN8	540 aa	Known RBP	11.73	□□□□□ -0.53
LMNA-210	ENST00000469565	DIMT1	Q9UNQ2	313 aa	Known RBP	11.73	□□□□□ -0.53
LMNA-210	ENST00000469565	LAMP3	Q9UQV4	416 aa		11.73	□□□□□ -0.53
LMNA-210	ENST00000469565	EXOSC1	Q9Y3B2	195 aa	Known RBP	11.73	□□□□□ -0.53
LMNA-210	ENST00000469565	C5orf63	A6NC05	138 aa		11.72	□□□□□ -0.53
LMNA-210	ENST00000469565	LOC110117498-PIK3R3	F6TDL0	507 aa		11.72	□□□□□ -0.53
LMNA-210	ENST00000469565	SULT1C4	O75897	302 aa		11.72	□□□□□ -0.53
LMNA-210	ENST00000469565	CLPTM1	O96005	669 aa		11.72	□□□□□ -0.53
LMNA-210	ENST00000469565	IGHA1	P01876	353 aa		11.72	□□□□□ -0.53
LMNA-210	ENST00000469565	PIP	P12273	146 aa	Predicted RBP	11.72	□□□□□ -0.53
LMNA-210	ENST00000469565	EEF1B2	P24534	225 aa	Known RBP	11.72	□□□□□ -0.53
LMNA-210	ENST00000469565	PSMB10	P40306	273 aa		11.72	□□□□□ -0.53
LMNA-210	ENST00000469565	ETV1	P50549	477 aa		11.72	□□□□□ -0.53
LMNA-210	ENST00000469565	ACTA2	P62736	377 aa		11.72	□□□□□ -0.53
LMNA-210	ENST00000469565	ACTG2	P63267	376 aa		11.72	□□□□□ -0.53
LMNA-210	ENST00000469565	MALL	Q13021	153 aa		11.72	□□□□□ -0.53
LMNA-210	ENST00000469565	HLX	Q14774	488 aa	Predicted RBP	11.72	□□□□□ -0.53
LMNA-210	ENST00000469565	ADIPOQ	Q15848	244 aa		11.72	□□□□□ -0.53
LMNA-210	ENST00000469565	TIGD6	Q17RP2	521 aa		11.72	□□□□□ -0.53
LMNA-210	ENST00000469565	MSMP	Q1L6U9	139 aa		11.72	□□□□□ -0.53
LMNA-210	ENST00000469565	ALKBH6	Q3KRA9	238 aa		11.72	□□□□□ -0.53
LMNA-210	ENST00000469565	RBM48	Q5RL73	367 aa	Known RBP	11.72	□□□□□ -0.53
LMNA-210	ENST00000469565	LIPN	Q5VXI9	398 aa		11.72	□□□□□ -0.53
LMNA-210	ENST00000469565	LRP11	Q86VZ4	500 aa		11.72	□□□□□ -0.53
LMNA-210	ENST00000469565	C1orf174	Q8IYL3	243 aa		11.72	□□□□□ -0.53

Retrieved 100 of 20,778 RNA–protein pairs in 39 ms