RNA–Protein interactions for RNA: ENST00000467539.1

CGREF1-208, Transcript of cell growth regulator with EF-hand domain 1, humanhuman

TSL 4

Gene CGREF1, Length 548 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CGREF1-208ENST00000467539 DNAJB9Q9UBS3 223 aa15.33■□□□□ 0.04
CGREF1-208ENST00000467539 PPP1R3CQ9UQK1 317 aa15.33■□□□□ 0.04
CGREF1-208ENST00000467539 COMMD3-BMI1R4GMX3 469 aa15.33■□□□□ 0.04
CGREF1-208ENST00000467539 IFNL4K9M1U5 179 aa15.32■□□□□ 0.04
CGREF1-208ENST00000467539 M0R135 149 aa15.32■□□□□ 0.04
CGREF1-208ENST00000467539 PLPP2O43688 288 aa15.32■□□□□ 0.04
CGREF1-208ENST00000467539 FKBP6O75344 327 aa15.32■□□□□ 0.04
CGREF1-208ENST00000467539 CLUP10909 449 aa15.32■□□□□ 0.04
CGREF1-208ENST00000467539 ANXA8P13928 327 aa15.32■□□□□ 0.04
CGREF1-208ENST00000467539 ZNF3P17036 446 aa15.32■□□□□ 0.04
CGREF1-208ENST00000467539 PRKACGP22612 351 aa15.32■□□□□ 0.04
CGREF1-208ENST00000467539 CBX1P83916 185 aa15.32■□□□□ 0.04
CGREF1-208ENST00000467539 GINS1Q14691 196 aa15.32■□□□□ 0.04
CGREF1-208ENST00000467539 LINC01590Q5TEZ4 76 aa15.32■□□□□ 0.04
CGREF1-208ENST00000467539 LRRC28Q86X40 367 aaPredicted RBP15.32■□□□□ 0.04
CGREF1-208ENST00000467539 TMEM158Q8WZ71 300 aa15.32■□□□□ 0.04
CGREF1-208ENST00000467539 SLCO4A1Q96BD0 722 aa15.32■□□□□ 0.04
CGREF1-208ENST00000467539 ZNF799Q96GE5 643 aa15.32■□□□□ 0.04
CGREF1-208ENST00000467539 OR2V2Q96R30 315 aa15.32■□□□□ 0.04
CGREF1-208ENST00000467539 ZNF556Q9HAH1 456 aa15.32■□□□□ 0.04
CGREF1-208ENST00000467539 GCM1Q9NP62 436 aa15.32■□□□□ 0.04
CGREF1-208ENST00000467539 H0YL77 283 aa15.31■□□□□ 0.04
CGREF1-208ENST00000467539 PHF1O43189 567 aaPredicted RBP15.31■□□□□ 0.04
CGREF1-208ENST00000467539 E2F6O75461 281 aa15.31■□□□□ 0.04
CGREF1-208ENST00000467539 ATP5HO75947 161 aa15.31■□□□□ 0.04
CGREF1-208ENST00000467539 IGHV2-70P01814 119 aa15.31■□□□□ 0.04
CGREF1-208ENST00000467539 HMGN1P05114 100 aa15.31■□□□□ 0.04
CGREF1-208ENST00000467539 SBK2P0C263 348 aa15.31■□□□□ 0.04
CGREF1-208ENST00000467539 PSKH1P11801 424 aa15.31■□□□□ 0.04
CGREF1-208ENST00000467539 OSMP13725 252 aa15.31■□□□□ 0.04
CGREF1-208ENST00000467539 SRP14P37108 136 aaKnown RBP15.31■□□□□ 0.04
CGREF1-208ENST00000467539 RASSF2P50749 326 aa15.31■□□□□ 0.04
CGREF1-208ENST00000467539 CDK5Q00535 292 aa15.31■□□□□ 0.04
CGREF1-208ENST00000467539 DRAM2Q6UX65 266 aa15.31■□□□□ 0.04
CGREF1-208ENST00000467539 IQCF1Q8N6M8 205 aa15.31■□□□□ 0.04
CGREF1-208ENST00000467539 SLAMF6Q96DU3 332 aa15.31■□□□□ 0.04
CGREF1-208ENST00000467539 NRBF2Q96F24 287 aa15.31■□□□□ 0.04
CGREF1-208ENST00000467539 MEGF10Q96KG7 1140 aa15.31■□□□□ 0.04
CGREF1-208ENST00000467539 KCNJ15Q99712 375 aa15.31■□□□□ 0.04
CGREF1-208ENST00000467539 GAL3ST1Q99999 423 aa15.31■□□□□ 0.04
CGREF1-208ENST00000467539 MARCH7Q9H992 704 aa15.31■□□□□ 0.04
CGREF1-208ENST00000467539 NTN4Q9HB63 628 aa15.31■□□□□ 0.04
CGREF1-208ENST00000467539 G6PC2Q9NQR9 355 aa15.31■□□□□ 0.04
CGREF1-208ENST00000467539 DCAF16Q9NXF7 216 aa15.31■□□□□ 0.04
CGREF1-208ENST00000467539 RNF212BA8MTL3 300 aa15.3■□□□□ 0.04
CGREF1-208ENST00000467539 TMEM178BH3BS89 294 aa15.3■□□□□ 0.04
CGREF1-208ENST00000467539 DYSFO75923 2080 aa15.3■□□□□ 0.04
CGREF1-208ENST00000467539 GLCEO94923 617 aa15.3■□□□□ 0.04
CGREF1-208ENST00000467539 SPARCP09486 303 aa15.3■□□□□ 0.04
CGREF1-208ENST00000467539 POU1F1P28069 291 aa15.3■□□□□ 0.04
CGREF1-208ENST00000467539 SRP9P49458 86 aaKnown RBP15.3■□□□□ 0.04
CGREF1-208ENST00000467539 FAHD2BQ6P2I3 314 aaPredicted RBP15.3■□□□□ 0.04
CGREF1-208ENST00000467539 PGAP1Q75T13 922 aa15.3■□□□□ 0.04
CGREF1-208ENST00000467539 RHOUQ7L0Q8 258 aa15.3■□□□□ 0.04
CGREF1-208ENST00000467539 HS3ST5Q8IZT8 346 aa15.3■□□□□ 0.04
CGREF1-208ENST00000467539 OR6K6Q8NGW6 343 aa15.3■□□□□ 0.04
CGREF1-208ENST00000467539 ST7LQ8TDW4 575 aa15.3■□□□□ 0.04
CGREF1-208ENST00000467539 FAHD2AQ96GK7 314 aa15.3■□□□□ 0.04
CGREF1-208ENST00000467539 SIGLEC11Q96RL6 698 aa15.3■□□□□ 0.04
CGREF1-208ENST00000467539 REPIN1Q9BWE0 567 aaKnown RBP15.3■□□□□ 0.04
CGREF1-208ENST00000467539 MED20Q9H944 212 aa15.3■□□□□ 0.04
CGREF1-208ENST00000467539 CENPMQ9NSP4 180 aa15.3■□□□□ 0.04
CGREF1-208ENST00000467539 ISPDA4D126 451 aa15.29■□□□□ 0.04
CGREF1-208ENST00000467539 FAM183AA6NL82 134 aa15.29■□□□□ 0.04
CGREF1-208ENST00000467539 MLNRO43193 412 aa15.29■□□□□ 0.04
CGREF1-208ENST00000467539 GSTT1P30711 240 aa15.29■□□□□ 0.04
CGREF1-208ENST00000467539 SLC15A1P46059 708 aa15.29■□□□□ 0.04
CGREF1-208ENST00000467539 TAF13Q15543 124 aa15.29■□□□□ 0.04
CGREF1-208ENST00000467539 TMEM155Q4W5P6 130 aa15.29■□□□□ 0.04
CGREF1-208ENST00000467539 SHFQ7M4L6 423 aa15.29■□□□□ 0.04
CGREF1-208ENST00000467539 CELF2-AS1Q8N7Q2 184 aa15.29■□□□□ 0.04
CGREF1-208ENST00000467539 BHLHE23Q8NDY6 225 aa15.29■□□□□ 0.04
CGREF1-208ENST00000467539 UTP4Q969X6 686 aaKnown RBP15.29■□□□□ 0.04
CGREF1-208ENST00000467539 COPS4Q9BT78 406 aa15.29■□□□□ 0.04
CGREF1-208ENST00000467539 MMADHCQ9H3L0 296 aaPredicted RBP15.29■□□□□ 0.04
CGREF1-208ENST00000467539 DNHD1Q96M86 4753 aa15.29■□□□□ 0.04
CGREF1-208ENST00000467539 PRR23D1E9PI22 279 aaPredicted RBP15.28■□□□□ 0.04
CGREF1-208ENST00000467539 PRR23D2P0DMB1 279 aaPredicted RBP15.28■□□□□ 0.04
CGREF1-208ENST00000467539 PAICSP22234 425 aaKnown RBP15.28■□□□□ 0.04
CGREF1-208ENST00000467539 RBMXP38159 391 aaKnown RBP15.28■□□□□ 0.04
CGREF1-208ENST00000467539 SLC6A9P48067 706 aa15.28■□□□□ 0.04
CGREF1-208ENST00000467539 PRKXP51817 358 aa15.28■□□□□ 0.04
CGREF1-208ENST00000467539 ZNF92Q03936 586 aa15.28■□□□□ 0.04
CGREF1-208ENST00000467539 ZNF181Q2M3W8 571 aa15.28■□□□□ 0.04
CGREF1-208ENST00000467539 SNAI3Q3KNW1 292 aa15.28■□□□□ 0.04
CGREF1-208ENST00000467539 SHQ1Q6PI26 577 aaKnown RBP15.28■□□□□ 0.04
CGREF1-208ENST00000467539 MRPL21Q7Z2W9 205 aaKnown RBP15.28■□□□□ 0.04
CGREF1-208ENST00000467539 DPY19L4Q7Z388 723 aa15.28■□□□□ 0.04
CGREF1-208ENST00000467539 KLHL36Q8N4N3 616 aa15.28■□□□□ 0.04
CGREF1-208ENST00000467539 SPICQ8N5J4 248 aa15.28■□□□□ 0.04
CGREF1-208ENST00000467539 OR10AD1Q8NGE0 317 aa15.28■□□□□ 0.04
CGREF1-208ENST00000467539 SPRYD4Q8WW59 207 aaPredicted RBP15.28■□□□□ 0.04
CGREF1-208ENST00000467539 OTULINQ96BN8 352 aa15.28■□□□□ 0.04
CGREF1-208ENST00000467539 INTS14Q96SY0 518 aa15.28■□□□□ 0.04
CGREF1-208ENST00000467539 SLC22A4Q9H015 551 aa15.28■□□□□ 0.04
CGREF1-208ENST00000467539 PATZ1Q9HBE1 687 aaKnown RBP15.28■□□□□ 0.04
CGREF1-208ENST00000467539 UBAP1Q9NZ09 502 aa15.28■□□□□ 0.04
CGREF1-208ENST00000467539 METRNQ9UJH8 293 aa15.28■□□□□ 0.04
CGREF1-208ENST00000467539 PCDHB10Q9UN67 800 aa15.28■□□□□ 0.04
CGREF1-208ENST00000467539 CD300LBA8K4G0 201 aa15.27■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms