RNA–Protein interactions for RNA: ENST00000462730.5

HDAC6-213, Transcript of histone deacetylase 6, humanhuman

TSL 1 (best)

Gene HDAC6, Length 1,999 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-213ENST00000462730 FOXL2NBQ6ZUU3 175 aa12.78□□□□□ -0.36
HDAC6-213ENST00000462730 ASB5Q8WWX0 329 aa12.78□□□□□ -0.36
HDAC6-213ENST00000462730 ZNF845Q96IR2 970 aaPredicted RBP12.78□□□□□ -0.36
HDAC6-213ENST00000462730 CITED4Q96RK1 184 aa12.78□□□□□ -0.36
HDAC6-213ENST00000462730 ZNF416Q9BWM5 594 aa12.78□□□□□ -0.36
HDAC6-213ENST00000462730 SLC6A15Q9H2J7 730 aa12.78□□□□□ -0.36
HDAC6-213ENST00000462730 LIN7BQ9HAP6 207 aa12.78□□□□□ -0.36
HDAC6-213ENST00000462730 RER1O15258 196 aa12.78□□□□□ -0.36
HDAC6-213ENST00000462730 KLK10O43240 276 aa12.78□□□□□ -0.36
HDAC6-213ENST00000462730 EFSO43281 561 aa12.78□□□□□ -0.36
HDAC6-213ENST00000462730 LANCL1O43813 399 aa12.78□□□□□ -0.36
HDAC6-213ENST00000462730 NOS1APO75052 506 aaPredicted RBP12.78□□□□□ -0.36
HDAC6-213ENST00000462730 UBCP0CG48 685 aaKnown RBP12.78□□□□□ -0.36
HDAC6-213ENST00000462730 DCTDP32321 178 aa12.78□□□□□ -0.36
HDAC6-213ENST00000462730 TNFSF10P50591 281 aa12.78□□□□□ -0.36
HDAC6-213ENST00000462730 BTG1P62324 171 aa12.78□□□□□ -0.36
HDAC6-213ENST00000462730 TMEM244Q5VVB8 128 aa12.78□□□□□ -0.36
HDAC6-213ENST00000462730 PYHIN1Q6K0P9 492 aa12.78□□□□□ -0.36
HDAC6-213ENST00000462730 FCRLAQ7L513 359 aa12.78□□□□□ -0.36
HDAC6-213ENST00000462730 PNPLA5Q7Z6Z6 429 aaPredicted RBP12.78□□□□□ -0.36
HDAC6-213ENST00000462730 ELMOD2Q8IZ81 293 aa12.78□□□□□ -0.36
HDAC6-213ENST00000462730 ZFP62Q8NB50 900 aaPredicted RBP12.78□□□□□ -0.36
HDAC6-213ENST00000462730 TMEM178AQ8NBL3 297 aa12.78□□□□□ -0.36
HDAC6-213ENST00000462730 HYLS1Q96M11 299 aa12.78□□□□□ -0.36
HDAC6-213ENST00000462730 CMTM3Q96MX0 182 aa12.78□□□□□ -0.36
HDAC6-213ENST00000462730 RBM24Q9BX46 236 aaKnown RBP12.78□□□□□ -0.36
HDAC6-213ENST00000462730 PBOV1Q9GZY1 135 aa12.78□□□□□ -0.36
HDAC6-213ENST00000462730 TAS2R4Q9NYW5 299 aa12.78□□□□□ -0.36
HDAC6-213ENST00000462730 OR5V1Q9UGF6 321 aa12.78□□□□□ -0.36
HDAC6-213ENST00000462730 KCNN3Q9UGI6 736 aa12.78□□□□□ -0.36
HDAC6-213ENST00000462730 RCE1Q9Y256 329 aa12.78□□□□□ -0.36
HDAC6-213ENST00000462730 ISG15P05161 165 aa12.77□□□□□ -0.37
HDAC6-213ENST00000462730 CALCBP10092 127 aa12.77□□□□□ -0.37
HDAC6-213ENST00000462730 LHX2P50458 406 aa12.77□□□□□ -0.37
HDAC6-213ENST00000462730 ZNF84P51523 738 aa12.77□□□□□ -0.37
HDAC6-213ENST00000462730 PSMA6P60900 246 aaKnown RBP12.77□□□□□ -0.37
HDAC6-213ENST00000462730 LSM6P62312 80 aaKnown RBP12.77□□□□□ -0.37
HDAC6-213ENST00000462730 SRYQ05066 204 aa12.77□□□□□ -0.37
HDAC6-213ENST00000462730 HYAL4Q2M3T9 481 aa12.77□□□□□ -0.37
HDAC6-213ENST00000462730 PLA1AQ53H76 456 aa12.77□□□□□ -0.37
HDAC6-213ENST00000462730 ASPHD2Q6ICH7 369 aa12.77□□□□□ -0.37
HDAC6-213ENST00000462730 AAED1Q7RTV5 226 aa12.77□□□□□ -0.37
HDAC6-213ENST00000462730 CMTM4Q8IZR5 234 aa12.77□□□□□ -0.37
HDAC6-213ENST00000462730 CPNE4Q96A23 557 aaPredicted RBP12.77□□□□□ -0.37
HDAC6-213ENST00000462730 RFT1Q96AA3 541 aa12.77□□□□□ -0.37
HDAC6-213ENST00000462730 SLC25A38Q96DW6 304 aa12.77□□□□□ -0.37
HDAC6-213ENST00000462730 ABHD1Q96SE0 405 aa12.77□□□□□ -0.37
HDAC6-213ENST00000462730 THAP7Q9BT49 309 aaPredicted RBP12.77□□□□□ -0.37
HDAC6-213ENST00000462730 MRI1Q9BV20 369 aa12.77□□□□□ -0.37
HDAC6-213ENST00000462730 NELFAQ9H3P2 528 aa12.77□□□□□ -0.37
HDAC6-213ENST00000462730 PNRC2Q9NPJ4 139 aaKnown RBP12.77□□□□□ -0.37
HDAC6-213ENST00000462730 CKLFQ9UBR5 152 aa12.77□□□□□ -0.37
HDAC6-213ENST00000462730 KCNMB2Q9Y691 235 aa12.77□□□□□ -0.37
HDAC6-213ENST00000462730 DLL1O00548 723 aa12.76□□□□□ -0.37
HDAC6-213ENST00000462730 TTRP02766 147 aa12.76□□□□□ -0.37
HDAC6-213ENST00000462730 ADRB1P08588 477 aa12.76□□□□□ -0.37
HDAC6-213ENST00000462730 ACSM4P0C7M7 580 aa12.76□□□□□ -0.37
HDAC6-213ENST00000462730 FSTP19883 344 aa12.76□□□□□ -0.37
HDAC6-213ENST00000462730 PRKXP51817 358 aa12.76□□□□□ -0.37
HDAC6-213ENST00000462730 ENDOGQ14249 297 aaKnown RBP12.76□□□□□ -0.37
HDAC6-213ENST00000462730 IGFL2Q6UWQ7 119 aa12.76□□□□□ -0.37
HDAC6-213ENST00000462730 BAIAP2L2Q6UXY1 529 aa12.76□□□□□ -0.37
HDAC6-213ENST00000462730 IZUMO1Q8IYV9 350 aa12.76□□□□□ -0.37
HDAC6-213ENST00000462730 C9orf62Q8N4C0 152 aa12.76□□□□□ -0.37
HDAC6-213ENST00000462730 NABP1Q96AH0 204 aa12.76□□□□□ -0.37
HDAC6-213ENST00000462730 SCNM1Q9BWG6 230 aa12.76□□□□□ -0.37
HDAC6-213ENST00000462730 ABCG5Q9H222 651 aa12.76□□□□□ -0.37
HDAC6-213ENST00000462730 FOXJ3Q9UPW0 622 aa12.76□□□□□ -0.37
HDAC6-213ENST00000462730 PHF3Q92576 2039 aaKnown RBP12.76□□□□□ -0.37
HDAC6-213ENST00000462730 A0A0A6YYJ9 748 aa12.76□□□□□ -0.37
HDAC6-213ENST00000462730 EEF1E1O43324 174 aaKnown RBP12.76□□□□□ -0.37
HDAC6-213ENST00000462730 LMX1BO60663 402 aa12.76□□□□□ -0.37
HDAC6-213ENST00000462730 CYTIPO60759 359 aa12.76□□□□□ -0.37
HDAC6-213ENST00000462730 UBL3O95164 117 aa12.76□□□□□ -0.37
HDAC6-213ENST00000462730 NTF4P34130 210 aa12.76□□□□□ -0.37
HDAC6-213ENST00000462730 PPIAP62937 165 aaKnown RBP12.76□□□□□ -0.37
HDAC6-213ENST00000462730 RNASE12Q5GAN4 147 aaKnown RBP12.76□□□□□ -0.37
HDAC6-213ENST00000462730 RFPL4BQ6ZWI9 263 aa12.76□□□□□ -0.37
HDAC6-213ENST00000462730 MOB1AQ9H8S9 216 aa12.76□□□□□ -0.37
HDAC6-213ENST00000462730 STEAP1Q9UHE8 339 aa12.76□□□□□ -0.37
HDAC6-213ENST00000462730 SLC23A1Q9UHI7 598 aa12.76□□□□□ -0.37
HDAC6-213ENST00000462730 CAMK2AQ9UQM7 478 aa12.76□□□□□ -0.37
HDAC6-213ENST00000462730 MRPS7Q9Y2R9 242 aaKnown RBP12.76□□□□□ -0.37
HDAC6-213ENST00000462730 ACOT7O00154 380 aa12.75□□□□□ -0.37
HDAC6-213ENST00000462730 FABP7O15540 132 aa12.75□□□□□ -0.37
HDAC6-213ENST00000462730 IGFBP3P17936 291 aaPredicted RBP12.75□□□□□ -0.37
HDAC6-213ENST00000462730 PRKACBP22694 351 aa12.75□□□□□ -0.37
HDAC6-213ENST00000462730 BTCP35070 178 aa12.75□□□□□ -0.37
HDAC6-213ENST00000462730 CX3CR1P49238 355 aa12.75□□□□□ -0.37
HDAC6-213ENST00000462730 CLDN18P56856 261 aa12.75□□□□□ -0.37
HDAC6-213ENST00000462730 GRB2P62993 217 aaKnown RBP12.75□□□□□ -0.37
HDAC6-213ENST00000462730 PITPNAQ00169 270 aa12.75□□□□□ -0.37
HDAC6-213ENST00000462730 RAB11BQ15907 218 aa12.75□□□□□ -0.37
HDAC6-213ENST00000462730 RHOUQ7L0Q8 258 aa12.75□□□□□ -0.37
HDAC6-213ENST00000462730 LUZP2Q86TE4 346 aa12.75□□□□□ -0.37
HDAC6-213ENST00000462730 GPR137CQ8N3F9 429 aa12.75□□□□□ -0.37
HDAC6-213ENST00000462730 LRRC18Q8N456 261 aa12.75□□□□□ -0.37
HDAC6-213ENST00000462730 SYNPRQ8TBG9 265 aa12.75□□□□□ -0.37
HDAC6-213ENST00000462730 ABHD3Q8WU67 409 aa12.75□□□□□ -0.37
HDAC6-213ENST00000462730 ZNF837Q96EG3 531 aaPredicted RBP12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms