RNA–Protein interactions for RNA: ENST00000462236.1

COPS3-204, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5

Gene COPS3, Length 551 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-204ENST00000462236 DUSP5Q16690 384 aa3.94□□□□□ -1.78
COPS3-204ENST00000462236 KLF17Q5JT82 389 aaPredicted RBP3.94□□□□□ -1.78
COPS3-204ENST00000462236 SAXO2Q658L1 398 aa3.94□□□□□ -1.78
COPS3-204ENST00000462236 ACSM5Q6NUN0 579 aa3.94□□□□□ -1.78
COPS3-204ENST00000462236 LEG1Q6P5S2 330 aa3.94□□□□□ -1.78
COPS3-204ENST00000462236 Q6ZTC4 211 aa3.94□□□□□ -1.78
COPS3-204ENST00000462236 RPS27LQ71UM5 84 aaKnown RBP3.94□□□□□ -1.78
COPS3-204ENST00000462236 BPIFB2Q8N4F0 458 aa3.94□□□□□ -1.78
COPS3-204ENST00000462236 ZIC4Q8N9L1 334 aa3.94□□□□□ -1.78
COPS3-204ENST00000462236 CDRT4Q8N9R6 151 aa3.94□□□□□ -1.78
COPS3-204ENST00000462236 OR4M2Q8NGB6 313 aa3.94□□□□□ -1.78
COPS3-204ENST00000462236 PIGXQ8TBF5 258 aa3.94□□□□□ -1.78
COPS3-204ENST00000462236 ACTRT1Q8TDG2 376 aa3.94□□□□□ -1.78
COPS3-204ENST00000462236 CKAP2Q8WWK9 683 aa3.94□□□□□ -1.78
COPS3-204ENST00000462236 SELENOMQ8WWX9 145 aa3.94□□□□□ -1.78
COPS3-204ENST00000462236 RDH5Q92781 318 aa3.94□□□□□ -1.78
COPS3-204ENST00000462236 BCL2L2Q92843 193 aaPredicted RBP3.94□□□□□ -1.78
COPS3-204ENST00000462236 TMEM45BQ96B21 275 aa3.94□□□□□ -1.78
COPS3-204ENST00000462236 ARL5BQ96KC2 179 aa3.94□□□□□ -1.78
COPS3-204ENST00000462236 C4orf45Q96LM5 186 aa3.94□□□□□ -1.78
COPS3-204ENST00000462236 ZNF75AQ96N20 296 aa3.94□□□□□ -1.78
COPS3-204ENST00000462236 ZNF317Q96PQ6 595 aaPredicted RBP3.94□□□□□ -1.78
COPS3-204ENST00000462236 RBM4BQ9BQ04 359 aaKnown RBP3.94□□□□□ -1.78
COPS3-204ENST00000462236 ACPTQ9BZG2 426 aa3.94□□□□□ -1.78
COPS3-204ENST00000462236 ZNF665Q9H7R5 613 aa3.94□□□□□ -1.78
COPS3-204ENST00000462236 DDX18Q9NVP1 670 aaKnown RBP3.94□□□□□ -1.78
COPS3-204ENST00000462236 CHCHD3Q9NX63 227 aaKnown RBP3.94□□□□□ -1.78
COPS3-204ENST00000462236 GIN1Q9NXP7 522 aa3.94□□□□□ -1.78
COPS3-204ENST00000462236 LEF1Q9UJU2 399 aaPredicted RBP3.94□□□□□ -1.78
COPS3-204ENST00000462236 FRAS1Q86XX4 4008 aa3.93□□□□□ -1.78
COPS3-204ENST00000462236 A0A087WW49 117 aa3.93□□□□□ -1.78
COPS3-204ENST00000462236 H0YAE9 185 aa3.93□□□□□ -1.78
COPS3-204ENST00000462236 SULT2B1O00204 365 aa3.93□□□□□ -1.78
COPS3-204ENST00000462236 PGRMC1O00264 195 aaKnown RBP3.93□□□□□ -1.78
COPS3-204ENST00000462236 MANBAO00462 879 aa3.93□□□□□ -1.78
COPS3-204ENST00000462236 TRAF3IP2O43734 574 aaPredicted RBP3.93□□□□□ -1.78
COPS3-204ENST00000462236 EIF4E2O60573 245 aaKnown RBP3.93□□□□□ -1.78
COPS3-204ENST00000462236 TBX19O60806 448 aa3.93□□□□□ -1.78
COPS3-204ENST00000462236 NDUFA7O95182 113 aa3.93□□□□□ -1.78
COPS3-204ENST00000462236 MPZL1O95297 269 aa3.93□□□□□ -1.78
COPS3-204ENST00000462236 C2P06681 752 aa3.93□□□□□ -1.78
COPS3-204ENST00000462236 ERCC1P07992 297 aaPredicted RBP3.93□□□□□ -1.78
COPS3-204ENST00000462236 ADRA2AP08913 450 aa3.93□□□□□ -1.78
COPS3-204ENST00000462236 PRPS2P11908 318 aa3.93□□□□□ -1.78
COPS3-204ENST00000462236 ANPEPP15144 967 aa3.93□□□□□ -1.78
COPS3-204ENST00000462236 NPR2P20594 1047 aa3.93□□□□□ -1.78
COPS3-204ENST00000462236 SOAT1P35610 550 aa3.93□□□□□ -1.78
COPS3-204ENST00000462236 SLC1A3P43003 542 aa3.93□□□□□ -1.78
COPS3-204ENST00000462236 MAGEA12P43365 314 aa3.93□□□□□ -1.78
COPS3-204ENST00000462236 ZNF763Q0D2J5 394 aa3.93□□□□□ -1.78
COPS3-204ENST00000462236 SKP2Q13309 424 aa3.93□□□□□ -1.78
COPS3-204ENST00000462236 RBM39Q14498 530 aaKnown RBP3.93□□□□□ -1.78
COPS3-204ENST00000462236 QPRTQ15274 297 aa3.93□□□□□ -1.78
COPS3-204ENST00000462236 PPP1R7Q15435 360 aa3.93□□□□□ -1.78
COPS3-204ENST00000462236 FAM83EQ2M2I3 478 aa3.93□□□□□ -1.78
COPS3-204ENST00000462236 NDUFAF6Q330K2 333 aa3.93□□□□□ -1.78
COPS3-204ENST00000462236 VPS26BQ4G0F5 336 aa3.93□□□□□ -1.78
COPS3-204ENST00000462236 HIKESHIQ53FT3 197 aa3.93□□□□□ -1.78
COPS3-204ENST00000462236 SPIN4Q56A73 249 aa3.93□□□□□ -1.78
COPS3-204ENST00000462236 C9orf135Q5VTT2 229 aa3.93□□□□□ -1.78
COPS3-204ENST00000462236 TTC19Q6DKK2 380 aaPredicted RBP3.93□□□□□ -1.78
COPS3-204ENST00000462236 ZCCHC12Q6PEW1 402 aa3.93□□□□□ -1.78
COPS3-204ENST00000462236 C16orf87Q6PH81 154 aa3.93□□□□□ -1.78
COPS3-204ENST00000462236 RAPH1Q70E73 1250 aa3.93□□□□□ -1.78
COPS3-204ENST00000462236 UBE2J2Q8N2K1 259 aa3.93□□□□□ -1.78
COPS3-204ENST00000462236 FAM89BQ8N5H3 189 aa3.93□□□□□ -1.78
COPS3-204ENST00000462236 FAM71CQ8NEG0 241 aa3.93□□□□□ -1.78
COPS3-204ENST00000462236 DEFB108BQ8NET1 73 aa3.93□□□□□ -1.78
COPS3-204ENST00000462236 ATP6V1C2Q8NEY4 427 aa3.93□□□□□ -1.78
COPS3-204ENST00000462236 OR5AP2Q8NGF4 316 aa3.93□□□□□ -1.78
COPS3-204ENST00000462236 OR10G8Q8NGN5 311 aa3.93□□□□□ -1.78
COPS3-204ENST00000462236 OR1K1Q8NGR3 316 aa3.93□□□□□ -1.78
COPS3-204ENST00000462236 OR2T11Q8NH01 316 aa3.93□□□□□ -1.78
COPS3-204ENST00000462236 OR5W2Q8NH69 310 aa3.93□□□□□ -1.78
COPS3-204ENST00000462236 MRGPRDQ8TDS7 321 aa3.93□□□□□ -1.78
COPS3-204ENST00000462236 GPR151Q8TDV0 419 aa3.93□□□□□ -1.78
COPS3-204ENST00000462236 C22orf15Q8WYQ4 148 aa3.93□□□□□ -1.78
COPS3-204ENST00000462236 ST8SIA1Q92185 356 aa3.93□□□□□ -1.78
COPS3-204ENST00000462236 CORO2AQ92828 525 aa3.93□□□□□ -1.78
COPS3-204ENST00000462236 POP5Q969H6 163 aaKnown RBP3.93□□□□□ -1.78
COPS3-204ENST00000462236 TMIGD2Q96BF3 282 aa3.93□□□□□ -1.78
COPS3-204ENST00000462236 LRR1Q96L50 414 aa3.93□□□□□ -1.78
COPS3-204ENST00000462236 ANKRD27Q96NW4 1050 aa3.93□□□□□ -1.78
COPS3-204ENST00000462236 OR5B2Q96R09 309 aa3.93□□□□□ -1.78
COPS3-204ENST00000462236 STACQ99469 402 aa3.93□□□□□ -1.78
COPS3-204ENST00000462236 GPA33Q99795 319 aa3.93□□□□□ -1.78
COPS3-204ENST00000462236 MRPL37Q9BZE1 423 aaKnown RBP3.93□□□□□ -1.78
COPS3-204ENST00000462236 BARHL1Q9BZE3 327 aa3.93□□□□□ -1.78
COPS3-204ENST00000462236 TPK1Q9H3S4 243 aa3.93□□□□□ -1.78
COPS3-204ENST00000462236 ELOVL6Q9H5J4 265 aa3.93□□□□□ -1.78
COPS3-204ENST00000462236 NARFLQ9H6Q4 476 aa3.93□□□□□ -1.78
COPS3-204ENST00000462236 ACER3Q9NUN7 267 aa3.93□□□□□ -1.78
COPS3-204ENST00000462236 NMRK1Q9NWW6 199 aa3.93□□□□□ -1.78
COPS3-204ENST00000462236 PLEK2Q9NYT0 353 aa3.93□□□□□ -1.78
COPS3-204ENST00000462236 SENP1Q9P0U3 644 aa3.93□□□□□ -1.78
COPS3-204ENST00000462236 RNF14Q9UBS8 474 aa3.93□□□□□ -1.78
COPS3-204ENST00000462236 SNX6Q9UNH7 406 aa3.93□□□□□ -1.78
COPS3-204ENST00000462236 TRAPPC4Q9Y296 219 aa3.93□□□□□ -1.78
COPS3-204ENST00000462236 SLC9A8Q9Y2E8 581 aa3.93□□□□□ -1.78
COPS3-204ENST00000462236 HDGFL3Q9Y3E1 203 aa3.93□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms