RNA–Protein interactions for RNA: ENST00000460822.1

HPS3-203, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 2

Gene HPS3, Length 1,958 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-203ENST00000460822 SLC35D2Q76EJ3 337 aa2.24□□□□□ -2.05
HPS3-203ENST00000460822 ZNF546Q86UE3 836 aa2.24□□□□□ -2.05
HPS3-203ENST00000460822 LHFPL3Q86UP9 236 aa2.24□□□□□ -2.05
HPS3-203ENST00000460822 PPP1R27Q86WC6 154 aa2.24□□□□□ -2.05
HPS3-203ENST00000460822 ZNF547Q8IVP9 402 aa2.24□□□□□ -2.05
HPS3-203ENST00000460822 PRELID2Q8N945 189 aa2.24□□□□□ -2.05
HPS3-203ENST00000460822 ZNF557Q8N988 423 aaPredicted RBP2.24□□□□□ -2.05
HPS3-203ENST00000460822 OR10H4Q8NGA5 316 aa2.24□□□□□ -2.05
HPS3-203ENST00000460822 NUBPLQ8TB37 319 aa2.24□□□□□ -2.05
HPS3-203ENST00000460822 CXorf40AQ8TE69 158 aa2.24□□□□□ -2.05
HPS3-203ENST00000460822 C10orf82Q8WW14 230 aa2.24□□□□□ -2.05
HPS3-203ENST00000460822 FGGYQ96C11 551 aa2.24□□□□□ -2.05
HPS3-203ENST00000460822 ITCHQ96J02 903 aa2.24□□□□□ -2.05
HPS3-203ENST00000460822 MAGEB18Q96M61 343 aa2.24□□□□□ -2.05
HPS3-203ENST00000460822 CATSPER2Q96P56 530 aa2.24□□□□□ -2.05
HPS3-203ENST00000460822 SERPINB12Q96P63 405 aa2.24□□□□□ -2.05
HPS3-203ENST00000460822 TSG101Q99816 390 aa2.24□□□□□ -2.05
HPS3-203ENST00000460822 LZTS2Q9BRK4 669 aa2.24□□□□□ -2.05
HPS3-203ENST00000460822 MAP1LC3CQ9BXW4 147 aa2.24□□□□□ -2.05
HPS3-203ENST00000460822 DEFB129Q9H1M3 183 aa2.24□□□□□ -2.05
HPS3-203ENST00000460822 VCX3BQ9H321 246 aa2.24□□□□□ -2.05
HPS3-203ENST00000460822 CDC42EP4Q9H3Q1 356 aaKnown RBP2.24□□□□□ -2.05
HPS3-203ENST00000460822 NXF3Q9H4D5 531 aaKnown RBP2.24□□□□□ -2.05
HPS3-203ENST00000460822 ISG20L2Q9H9L3 353 aaKnown RBP2.24□□□□□ -2.05
HPS3-203ENST00000460822 PARVGQ9HBI0 331 aa2.24□□□□□ -2.05
HPS3-203ENST00000460822 VCX3AQ9NNX9 186 aa2.24□□□□□ -2.05
HPS3-203ENST00000460822 KCNIP1Q9NZI2 227 aa2.24□□□□□ -2.05
HPS3-203ENST00000460822 MTRF1LQ9UGC7 380 aaKnown RBP2.24□□□□□ -2.05
HPS3-203ENST00000460822 PCYOX1Q9UHG3 505 aa2.24□□□□□ -2.05
HPS3-203ENST00000460822 KIF25Q9UIL4 384 aa2.24□□□□□ -2.05
HPS3-203ENST00000460822 ING4Q9UNL4 249 aa2.24□□□□□ -2.05
HPS3-203ENST00000460822 RCL1Q9Y2P8 373 aaKnown RBP2.24□□□□□ -2.05
HPS3-203ENST00000460822 USH1CQ9Y6N9 552 aa2.24□□□□□ -2.05
HPS3-203ENST00000460822 SLIT2O94813 1529 aa2.24□□□□□ -2.05
HPS3-203ENST00000460822 DDX60LQ5H9U9 1706 aaKnown RBP2.24□□□□□ -2.05
HPS3-203ENST00000460822 FOCADQ5VW36 1801 aa2.24□□□□□ -2.05
HPS3-203ENST00000460822 SBF2Q86WG5 1849 aa2.24□□□□□ -2.05
HPS3-203ENST00000460822 IGSF9BQ9UPX0 1349 aa2.24□□□□□ -2.05
HPS3-203ENST00000460822 IGHV3OR16-13A0A075B7E8 117 aa2.23□□□□□ -2.05
HPS3-203ENST00000460822 IGHV7-81A0A0B4J1V7 117 aa2.23□□□□□ -2.05
HPS3-203ENST00000460822 GLYATL1P3A0A0U1RQE8 302 aa2.23□□□□□ -2.05
HPS3-203ENST00000460822 A0A1B0GW55 424 aa2.23□□□□□ -2.05
HPS3-203ENST00000460822 SLC22A20A6NK97 555 aa2.23□□□□□ -2.05
HPS3-203ENST00000460822 SRRM5B3KS81 715 aa2.23□□□□□ -2.05
HPS3-203ENST00000460822 MRPS12O15235 138 aaKnown RBP2.23□□□□□ -2.05
HPS3-203ENST00000460822 TBL1XO60907 577 aa2.23□□□□□ -2.05
HPS3-203ENST00000460822 CLDN11O75508 207 aa2.23□□□□□ -2.05
HPS3-203ENST00000460822 DCTN3O75935 186 aa2.23□□□□□ -2.05
HPS3-203ENST00000460822 DUX4L2P0CJ85 424 aa2.23□□□□□ -2.05
HPS3-203ENST00000460822 DUX4L3P0CJ86 424 aa2.23□□□□□ -2.05
HPS3-203ENST00000460822 DUX4L4P0CJ87 422 aa2.23□□□□□ -2.05
HPS3-203ENST00000460822 DUX4L5P0CJ88 424 aa2.23□□□□□ -2.05
HPS3-203ENST00000460822 DUX4L6P0CJ89 424 aa2.23□□□□□ -2.05
HPS3-203ENST00000460822 DUX4L7P0CJ90 424 aa2.23□□□□□ -2.05
HPS3-203ENST00000460822 UCHL3P15374 230 aa2.23□□□□□ -2.05
HPS3-203ENST00000460822 NQO2P16083 231 aa2.23□□□□□ -2.05
HPS3-203ENST00000460822 TBPP20226 339 aa2.23□□□□□ -2.05
HPS3-203ENST00000460822 IL12BP29460 328 aa2.23□□□□□ -2.05
HPS3-203ENST00000460822 MDH2P40926 338 aaKnown RBP2.23□□□□□ -2.05
HPS3-203ENST00000460822 CSKP41240 450 aa2.23□□□□□ -2.05
HPS3-203ENST00000460822 KCNJ3P48549 501 aa2.23□□□□□ -2.05
HPS3-203ENST00000460822 SLC26A2P50443 739 aa2.23□□□□□ -2.05
HPS3-203ENST00000460822 SELENOTP62341 195 aa2.23□□□□□ -2.05
HPS3-203ENST00000460822 PSG3Q16557 428 aa2.23□□□□□ -2.05
HPS3-203ENST00000460822 EXOC3L4Q17RC7 722 aa2.23□□□□□ -2.05
HPS3-203ENST00000460822 PGGHGQ32M88 737 aa2.23□□□□□ -2.05
HPS3-203ENST00000460822 LIN52Q52LA3 116 aa2.23□□□□□ -2.05
HPS3-203ENST00000460822 ACSBG2Q5FVE4 666 aa2.23□□□□□ -2.05
HPS3-203ENST00000460822 PAGE2BQ5JRK9 111 aa2.23□□□□□ -2.05
HPS3-203ENST00000460822 CLEC6AQ6EIG7 209 aa2.23□□□□□ -2.05
HPS3-203ENST00000460822 DUX4L9Q6RFH8 374 aaPredicted RBP2.23□□□□□ -2.05
HPS3-203ENST00000460822 METTL7BQ6UX53 244 aa2.23□□□□□ -2.05
HPS3-203ENST00000460822 UNQ9370/PRO34162Q6UXP9 181 aa2.23□□□□□ -2.05
HPS3-203ENST00000460822 H2AFVQ71UI9 128 aa2.23□□□□□ -2.05
HPS3-203ENST00000460822 TRMT10CQ7L0Y3 403 aaKnown RBP2.23□□□□□ -2.05
HPS3-203ENST00000460822 NELFCDQ8IXH7 590 aa2.23□□□□□ -2.05
HPS3-203ENST00000460822 SELENOHQ8IZQ5 122 aaKnown RBP2.23□□□□□ -2.05
HPS3-203ENST00000460822 DNAJC19Q96DA6 116 aa2.23□□□□□ -2.05
HPS3-203ENST00000460822 CPB2Q96IY4 423 aa2.23□□□□□ -2.05
HPS3-203ENST00000460822 FOXN4Q96NZ1 517 aa2.23□□□□□ -2.05
HPS3-203ENST00000460822 CYTH2Q99418 400 aa2.23□□□□□ -2.05
HPS3-203ENST00000460822 ZNF184Q99676 751 aaPredicted RBP2.23□□□□□ -2.05
HPS3-203ENST00000460822 RARRES2Q99969 163 aa2.23□□□□□ -2.05
HPS3-203ENST00000460822 KCTD14Q9BQ13 255 aaPredicted RBP2.23□□□□□ -2.05
HPS3-203ENST00000460822 PELOQ9BRX2 385 aaKnown RBP2.23□□□□□ -2.05
HPS3-203ENST00000460822 NAA50Q9GZZ1 169 aaKnown RBP2.23□□□□□ -2.05
HPS3-203ENST00000460822 Q9H3A6 140 aa2.23□□□□□ -2.05
HPS3-203ENST00000460822 KIR3DX1Q9H7L2 352 aa2.23□□□□□ -2.05
HPS3-203ENST00000460822 STMN3Q9NZ72 180 aa2.23□□□□□ -2.05
HPS3-203ENST00000460822 DUX4Q9UBX2 424 aa2.23□□□□□ -2.05
HPS3-203ENST00000460822 LGALS13Q9UHV8 139 aa2.23□□□□□ -2.05
HPS3-203ENST00000460822 ENPP5Q9UJA9 477 aa2.23□□□□□ -2.05
HPS3-203ENST00000460822 POFUT2Q9Y2G5 429 aa2.23□□□□□ -2.05
HPS3-203ENST00000460822 UGT2A1Q9Y4X1 527 aa2.23□□□□□ -2.05
HPS3-203ENST00000460822 DCCP43146 1447 aa2.23□□□□□ -2.05
HPS3-203ENST00000460822 C10orf71Q711Q0 1435 aa2.23□□□□□ -2.05
HPS3-203ENST00000460822 IGLV8-61A0A075B6I0 122 aa2.23□□□□□ -2.05
HPS3-203ENST00000460822 KIR2DL5BA0A0G2JN68 375 aa2.23□□□□□ -2.05
HPS3-203ENST00000460822 KIR2DL5BA0A0G2JPC4 375 aa2.23□□□□□ -2.05
HPS3-203ENST00000460822 ERI2A8K979 691 aaKnown RBP2.23□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms