RNA–Protein interactions for RNA: ENST00000460170.2

PTPRU-205, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 1 (best) BASIC

Gene PTPRU, Length 5,337 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-205ENST00000460170 ABHD5Q8WTS1 349 aa13.31□□□□□ -0.28
PTPRU-205ENST00000460170 TWSG1Q9GZX9 223 aa13.31□□□□□ -0.28
PTPRU-205ENST00000460170 C5orf67F2Z3F1 127 aa13.31□□□□□ -0.28
PTPRU-205ENST00000460170 ST8SIA3O43173 380 aa13.31□□□□□ -0.28
PTPRU-205ENST00000460170 TIMM8AO60220 97 aaPredicted RBP13.31□□□□□ -0.28
PTPRU-205ENST00000460170 RAG2P55895 527 aa13.31□□□□□ -0.28
PTPRU-205ENST00000460170 HBG1P69891 147 aa13.31□□□□□ -0.28
PTPRU-205ENST00000460170 HBG2P69892 147 aa13.31□□□□□ -0.28
PTPRU-205ENST00000460170 FAM122BQ7Z309 247 aa13.31□□□□□ -0.28
PTPRU-205ENST00000460170 SUMF1Q8NBK3 374 aa13.31□□□□□ -0.28
PTPRU-205ENST00000460170 OR51A4Q8NGJ6 313 aa13.31□□□□□ -0.28
PTPRU-205ENST00000460170 EMG1Q92979 244 aaKnown RBP13.31□□□□□ -0.28
PTPRU-205ENST00000460170 TMEM68Q96MH6 324 aa13.31□□□□□ -0.28
PTPRU-205ENST00000460170 TAF9BQ9HBM6 251 aa13.31□□□□□ -0.28
PTPRU-205ENST00000460170 PCYT1BQ9Y5K3 369 aaPredicted RBP13.31□□□□□ -0.28
PTPRU-205ENST00000460170 RBBP6Q7Z6E9 1792 aaKnown RBP13.3□□□□□ -0.28
PTPRU-205ENST00000460170 LILRB5O75023 590 aa13.3□□□□□ -0.28
PTPRU-205ENST00000460170 WNT1P04628 370 aa13.3□□□□□ -0.28
PTPRU-205ENST00000460170 PTHLHP12272 177 aa13.3□□□□□ -0.28
PTPRU-205ENST00000460170 GLDNQ6ZMI3 551 aaPredicted RBP13.3□□□□□ -0.28
PTPRU-205ENST00000460170 TMEM229BQ8NBD8 167 aa13.3□□□□□ -0.28
PTPRU-205ENST00000460170 MALSU1Q96EH3 234 aa13.3□□□□□ -0.28
PTPRU-205ENST00000460170 SPACA1Q9HBV2 294 aa13.3□□□□□ -0.28
PTPRU-205ENST00000460170 H7C1Q1 480 aa13.3□□□□□ -0.28
PTPRU-205ENST00000460170 BHLHE40O14503 412 aa13.3□□□□□ -0.28
PTPRU-205ENST00000460170 PI3P19957 117 aa13.3□□□□□ -0.28
PTPRU-205ENST00000460170 TLE4Q04727 773 aa13.3□□□□□ -0.28
PTPRU-205ENST00000460170 SOHLH1Q5JUK2 328 aa13.3□□□□□ -0.28
PTPRU-205ENST00000460170 UPRTQ96BW1 309 aa13.3□□□□□ -0.28
PTPRU-205ENST00000460170 TMEM100Q9NV29 134 aa13.3□□□□□ -0.28
PTPRU-205ENST00000460170 GNG12Q9UBI6 72 aa13.3□□□□□ -0.28
PTPRU-205ENST00000460170 IGHV1OR21-1A0A087WYE8 117 aa13.3□□□□□ -0.28
PTPRU-205ENST00000460170 IGHA1P01876 353 aa13.3□□□□□ -0.28
PTPRU-205ENST00000460170 TAF9Q16594 264 aa13.3□□□□□ -0.28
PTPRU-205ENST00000460170 DMKNQ6E0U4 476 aaPredicted RBP13.3□□□□□ -0.28
PTPRU-205ENST00000460170 LAIR1Q6GTX8 287 aa13.3□□□□□ -0.28
PTPRU-205ENST00000460170 ZC3HAV1Q7Z2W4 902 aaKnown RBP13.3□□□□□ -0.28
PTPRU-205ENST00000460170 ABHD1Q96SE0 405 aa13.3□□□□□ -0.28
PTPRU-205ENST00000460170 C12orf49Q9H741 205 aa13.3□□□□□ -0.28
PTPRU-205ENST00000460170 NTN1O95631 604 aa13.3□□□□□ -0.28
PTPRU-205ENST00000460170 LSM11P83369 360 aaKnown RBP eCLIP13.3□□□□□ -0.28
PTPRU-205ENST00000460170 PSG6Q00889 435 aa13.3□□□□□ -0.28
PTPRU-205ENST00000460170 ZBTB37Q5TC79 503 aa13.3□□□□□ -0.28
PTPRU-205ENST00000460170 SHEQ5VZ18 495 aa13.3□□□□□ -0.28
PTPRU-205ENST00000460170 LYG2Q86SG7 212 aa13.3□□□□□ -0.28
PTPRU-205ENST00000460170 TSPAN32Q96QS1 320 aa13.3□□□□□ -0.28
PTPRU-205ENST00000460170 GHRLQ9UBU3 117 aa13.3□□□□□ -0.28
PTPRU-205ENST00000460170 NDUFB6O95139 128 aa13.29□□□□□ -0.28
PTPRU-205ENST00000460170 NRASP01111 189 aa13.29□□□□□ -0.28
PTPRU-205ENST00000460170 MVDP53602 400 aa13.29□□□□□ -0.28
PTPRU-205ENST00000460170 UBE2KP61086 200 aa13.29□□□□□ -0.28
PTPRU-205ENST00000460170 TFAP2EQ6VUC0 442 aa13.29□□□□□ -0.28
PTPRU-205ENST00000460170 ARHGEF39Q8N4T4 335 aa13.29□□□□□ -0.28
PTPRU-205ENST00000460170 KCNRGQ8N5I3 272 aa13.29□□□□□ -0.28
PTPRU-205ENST00000460170 NOXO1Q8NFA2 376 aa13.29□□□□□ -0.28
PTPRU-205ENST00000460170 ASB13Q8WXK3 278 aa13.29□□□□□ -0.28
PTPRU-205ENST00000460170 SLC17A5Q9NRA2 495 aa13.29□□□□□ -0.28
PTPRU-205ENST00000460170 FLRT3Q9NZU0 649 aa13.29□□□□□ -0.28
PTPRU-205ENST00000460170 OR5V1Q9UGF6 321 aa13.29□□□□□ -0.28
PTPRU-205ENST00000460170 IGHV3-15A0A0B4J1V0 119 aa13.29□□□□□ -0.28
PTPRU-205ENST00000460170 EML2O95834 649 aa13.29□□□□□ -0.28
PTPRU-205ENST00000460170 IFNA10P01566 189 aa13.29□□□□□ -0.28
PTPRU-205ENST00000460170 GLI4P10075 376 aa13.29□□□□□ -0.28
PTPRU-205ENST00000460170 OPRM1P35372 400 aa13.29□□□□□ -0.28
PTPRU-205ENST00000460170 KIR2DL1P43626 348 aaPredicted RBP13.29□□□□□ -0.28
PTPRU-205ENST00000460170 TMEM217Q8N7C4 229 aa13.29□□□□□ -0.28
PTPRU-205ENST00000460170 INTS12Q96CB8 462 aaKnown RBP13.29□□□□□ -0.28
PTPRU-205ENST00000460170 MOGAT1Q96PD6 335 aa13.29□□□□□ -0.28
PTPRU-205ENST00000460170 SLC25A32Q9H2D1 315 aa13.29□□□□□ -0.28
PTPRU-205ENST00000460170 V9GYH0 126 aa13.29□□□□□ -0.28
PTPRU-205ENST00000460170 RPS10-NUDT3A0A1W2PQS6 291 aa13.29□□□□□ -0.28
PTPRU-205ENST00000460170 FOLR1P15328 257 aa13.29□□□□□ -0.28
PTPRU-205ENST00000460170 RPS10P46783 165 aaKnown RBP13.29□□□□□ -0.28
PTPRU-205ENST00000460170 CCL7P80098 99 aa13.29□□□□□ -0.28
PTPRU-205ENST00000460170 MYBPHQ13203 477 aa13.29□□□□□ -0.28
PTPRU-205ENST00000460170 LTC4SQ16873 150 aa13.29□□□□□ -0.28
PTPRU-205ENST00000460170 PAN3Q58A45 887 aaKnown RBP13.29□□□□□ -0.28
PTPRU-205ENST00000460170 ABI3BPQ7Z7G0 1075 aa13.29□□□□□ -0.28
PTPRU-205ENST00000460170 BATF2Q8N1L9 274 aa13.29□□□□□ -0.28
PTPRU-205ENST00000460170 DTWD2Q8NBA8 298 aa13.29□□□□□ -0.28
PTPRU-205ENST00000460170 OR13C8Q8NGS7 320 aa13.29□□□□□ -0.28
PTPRU-205ENST00000460170 WDR89Q96FK6 387 aaPredicted RBP13.29□□□□□ -0.28
PTPRU-205ENST00000460170 PTPRFP10586 1907 aa13.29□□□□□ -0.28
PTPRU-205ENST00000460170 TNFSF14O43557 240 aa13.29□□□□□ -0.28
PTPRU-205ENST00000460170 MRPS34P82930 218 aaKnown RBP13.29□□□□□ -0.28
PTPRU-205ENST00000460170 ZNF85Q03923 595 aa13.29□□□□□ -0.28
PTPRU-205ENST00000460170 TEX261Q6UWH6 196 aa13.29□□□□□ -0.28
PTPRU-205ENST00000460170 DUSP18Q8NEJ0 188 aa13.29□□□□□ -0.28
PTPRU-205ENST00000460170 TMED6Q8WW62 240 aa13.29□□□□□ -0.28
PTPRU-205ENST00000460170 KCNE4Q8WWG9 221 aa13.29□□□□□ -0.28
PTPRU-205ENST00000460170 C22orf15Q8WYQ4 148 aa13.29□□□□□ -0.28
PTPRU-205ENST00000460170 YIPF5Q969M3 257 aa13.29□□□□□ -0.28
PTPRU-205ENST00000460170 B3GAT1Q9P2W7 334 aa13.29□□□□□ -0.28
PTPRU-205ENST00000460170 U3KQ87 197 aa13.29□□□□□ -0.28
PTPRU-205ENST00000460170 PARP14Q460N5 1801 aa13.29□□□□□ -0.28
PTPRU-205ENST00000460170 CBR3O75828 277 aa13.28□□□□□ -0.28
PTPRU-205ENST00000460170 MGMTP16455 207 aa13.28□□□□□ -0.28
PTPRU-205ENST00000460170 TAS2R30P59541 319 aa13.28□□□□□ -0.28
PTPRU-205ENST00000460170 MESP2Q0VG99 397 aa13.28□□□□□ -0.28
PTPRU-205ENST00000460170 PTP4A1Q93096 173 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms