RNA–Protein interactions for RNA: ENST00000445503.5

MSH6-204, Transcript of mutS homolog 6, humanhuman

TSL 1 (best)

Gene MSH6, Length 4,158 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-204ENST00000445503 BLACEA4D250 179 aa10.63□□□□□ -0.71
MSH6-204ENST00000445503 NPIPB9F8W1W9 429 aa10.63□□□□□ -0.71
MSH6-204ENST00000445503 MED6O75586 246 aa10.63□□□□□ -0.71
MSH6-204ENST00000445503 TMEM225BP0DP42 221 aa10.63□□□□□ -0.71
MSH6-204ENST00000445503 DHPSP49366 369 aaPredicted RBP10.63□□□□□ -0.71
MSH6-204ENST00000445503 DCAF7P61962 342 aa10.63□□□□□ -0.71
MSH6-204ENST00000445503 HNRNPKP61978 463 aaKnown RBP eCLIP10.63□□□□□ -0.71
MSH6-204ENST00000445503 RPS4XP62701 263 aaKnown RBP10.63□□□□□ -0.71
MSH6-204ENST00000445503 PDSS1Q5T2R2 415 aa10.63□□□□□ -0.71
MSH6-204ENST00000445503 PRAMEF20Q5VT98 475 aa10.63□□□□□ -0.71
MSH6-204ENST00000445503 EIF5AL1Q6IS14 154 aaKnown RBP10.63□□□□□ -0.71
MSH6-204ENST00000445503 HSD17B13Q7Z5P4 300 aaPredicted RBP10.63□□□□□ -0.71
MSH6-204ENST00000445503 ADAD2Q8NCV1 583 aaKnown RBP10.63□□□□□ -0.71
MSH6-204ENST00000445503 OR5M8Q8NGP6 311 aa10.63□□□□□ -0.71
MSH6-204ENST00000445503 SCGB3A2Q96PL1 93 aa10.63□□□□□ -0.71
MSH6-204ENST00000445503 CCNL2Q96S94 520 aaPredicted RBP10.63□□□□□ -0.71
MSH6-204ENST00000445503 RTN4RQ9BZR6 473 aa10.63□□□□□ -0.71
MSH6-204ENST00000445503 KLK13Q9UKR3 277 aa10.63□□□□□ -0.71
MSH6-204ENST00000445503 SLCO1B1Q9Y6L6 691 aa10.63□□□□□ -0.71
MSH6-204ENST00000445503 TRBV5-7A0A0A0MS05 114 aa10.63□□□□□ -0.71
MSH6-204ENST00000445503 A0A0A6YYH2 397 aa10.63□□□□□ -0.71
MSH6-204ENST00000445503 TRBV11-1A0A0K0K1C0 115 aa10.63□□□□□ -0.71
MSH6-204ENST00000445503 A6NJ64 397 aa10.63□□□□□ -0.71
MSH6-204ENST00000445503 DUX1O43812 170 aa10.63□□□□□ -0.71
MSH6-204ENST00000445503 ADAP1O75689 374 aa10.63□□□□□ -0.71
MSH6-204ENST00000445503 CYCSP99999 105 aaKnown RBP10.63□□□□□ -0.71
MSH6-204ENST00000445503 RBM39Q14498 530 aaKnown RBP10.63□□□□□ -0.71
MSH6-204ENST00000445503 PLXDC1Q8IUK5 500 aa10.63□□□□□ -0.71
MSH6-204ENST00000445503 C11orf40Q8WZ69 217 aa10.63□□□□□ -0.71
MSH6-204ENST00000445503 RBM24Q9BX46 236 aaKnown RBP10.63□□□□□ -0.71
MSH6-204ENST00000445503 WWTR1Q9GZV5 400 aa10.63□□□□□ -0.71
MSH6-204ENST00000445503 PIGMQ9H3S5 423 aa10.63□□□□□ -0.71
MSH6-204ENST00000445503 ZNF275Q9NSD4 429 aaPredicted RBP10.63□□□□□ -0.71
MSH6-204ENST00000445503 MRPL22Q9NWU5 206 aaKnown RBP10.63□□□□□ -0.71
MSH6-204ENST00000445503 CTSFQ9UBX1 484 aa10.63□□□□□ -0.71
MSH6-204ENST00000445503 TMEM200CA6NKL6 621 aa10.63□□□□□ -0.71
MSH6-204ENST00000445503 ABHD16AO95870 558 aa10.63□□□□□ -0.71
MSH6-204ENST00000445503 BLVRBP30043 206 aaPredicted RBP10.63□□□□□ -0.71
MSH6-204ENST00000445503 LBX1P52954 281 aa10.63□□□□□ -0.71
MSH6-204ENST00000445503 NR0B2Q15466 257 aa10.63□□□□□ -0.71
MSH6-204ENST00000445503 STK11Q15831 433 aa10.63□□□□□ -0.71
MSH6-204ENST00000445503 LRRC18Q8N456 261 aa10.63□□□□□ -0.71
MSH6-204ENST00000445503 CLRN3Q8NCR9 226 aa10.63□□□□□ -0.71
MSH6-204ENST00000445503 GPX7Q96SL4 187 aaPredicted RBP10.63□□□□□ -0.71
MSH6-204ENST00000445503 FOXQ1Q9C009 403 aa10.63□□□□□ -0.71
MSH6-204ENST00000445503 PBOV1Q9GZY1 135 aa10.63□□□□□ -0.71
MSH6-204ENST00000445503 C8orf33Q9H7E9 229 aaPredicted RBP10.63□□□□□ -0.71
MSH6-204ENST00000445503 LMAN1LQ9HAT1 526 aa10.63□□□□□ -0.71
MSH6-204ENST00000445503 VSIG4Q9Y279 399 aa10.63□□□□□ -0.71
MSH6-204ENST00000445503 MMACHCQ9Y4U1 282 aa10.63□□□□□ -0.71
MSH6-204ENST00000445503 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa10.62□□□□□ -0.71
MSH6-204ENST00000445503 C9orf170A2RU37 121 aa10.62□□□□□ -0.71
MSH6-204ENST00000445503 METTL12A8MUP2 240 aa10.62□□□□□ -0.71
MSH6-204ENST00000445503 SLC33A1O00400 549 aaPredicted RBP10.62□□□□□ -0.71
MSH6-204ENST00000445503 CASRP41180 1078 aa10.62□□□□□ -0.71
MSH6-204ENST00000445503 HSD11B2P80365 405 aa10.62□□□□□ -0.71
MSH6-204ENST00000445503 RIPPLY1Q0D2K3 151 aa10.62□□□□□ -0.71
MSH6-204ENST00000445503 TMEM176BQ3YBM2 270 aaPredicted RBP10.62□□□□□ -0.71
MSH6-204ENST00000445503 NKAIN3Q8N8D7 197 aa10.62□□□□□ -0.71
MSH6-204ENST00000445503 CD300LFQ8TDQ1 290 aa10.62□□□□□ -0.71
MSH6-204ENST00000445503 MFRPQ9BY79 579 aa10.62□□□□□ -0.71
MSH6-204ENST00000445503 FAM96BQ9Y3D0 163 aa10.62□□□□□ -0.71
MSH6-204ENST00000445503 UNC80Q8N2C7 3258 aa10.62□□□□□ -0.71
MSH6-204ENST00000445503 G3V3Y1 287 aa10.62□□□□□ -0.71
MSH6-204ENST00000445503 SULT1C2O00338 296 aa10.62□□□□□ -0.71
MSH6-204ENST00000445503 BGLAPP02818 100 aa10.62□□□□□ -0.71
MSH6-204ENST00000445503 AKR1C3P42330 323 aa10.62□□□□□ -0.71
MSH6-204ENST00000445503 SNU13P55769 128 aaKnown RBP10.62□□□□□ -0.71
MSH6-204ENST00000445503 EIF5AP63241 154 aaKnown RBP10.62□□□□□ -0.71
MSH6-204ENST00000445503 TDGQ13569 410 aa10.62□□□□□ -0.71
MSH6-204ENST00000445503 CBLN2Q8IUK8 224 aa10.62□□□□□ -0.71
MSH6-204ENST00000445503 GPR84Q9NQS5 396 aa10.62□□□□□ -0.71
MSH6-204ENST00000445503 WDR87Q6ZQQ6 2873 aa10.62□□□□□ -0.71
MSH6-204ENST00000445503 A0A1W2PPC1 479 aa10.62□□□□□ -0.71
MSH6-204ENST00000445503 ZNF850A8MQ14 1090 aa10.62□□□□□ -0.71
MSH6-204ENST00000445503 G3V3Q6 166 aa10.62□□□□□ -0.71
MSH6-204ENST00000445503 PLPP3O14495 311 aa10.62□□□□□ -0.71
MSH6-204ENST00000445503 MPPED2Q15777 294 aa10.62□□□□□ -0.71
MSH6-204ENST00000445503 OR5T2Q8NGG2 359 aa10.62□□□□□ -0.71
MSH6-204ENST00000445503 NEK7Q8TDX7 302 aa10.62□□□□□ -0.71
MSH6-204ENST00000445503 MCHR2Q969V1 340 aa10.62□□□□□ -0.71
MSH6-204ENST00000445503 EIF5A2Q9GZV4 153 aaKnown RBP10.62□□□□□ -0.71
MSH6-204ENST00000445503 ZNF160Q9HCG1 818 aa10.62□□□□□ -0.71
MSH6-204ENST00000445503 ZNF629Q9UEG4 869 aaPredicted RBP10.62□□□□□ -0.71
MSH6-204ENST00000445503 LOC101059948A0A1B0GTJ6 334 aa10.62□□□□□ -0.71
MSH6-204ENST00000445503 A0A1W2PPC4 97 aa10.62□□□□□ -0.71
MSH6-204ENST00000445503 IGHV4-34P06331 123 aa10.62□□□□□ -0.71
MSH6-204ENST00000445503 KRBOX4Q5JUW0 171 aa10.62□□□□□ -0.71
MSH6-204ENST00000445503 LPCAT3Q6P1A2 487 aa10.62□□□□□ -0.71
MSH6-204ENST00000445503 BAP18Q8IXM2 172 aa10.62□□□□□ -0.71
MSH6-204ENST00000445503 RNF141Q8WVD5 230 aa10.62□□□□□ -0.71
MSH6-204ENST00000445503 PIGTQ969N2 578 aa10.62□□□□□ -0.71
MSH6-204ENST00000445503 C8orf44Q96CB5 159 aa10.62□□□□□ -0.71
MSH6-204ENST00000445503 MRPS24Q96EL2 167 aaKnown RBP10.62□□□□□ -0.71
MSH6-204ENST00000445503 DEFB126Q9BYW3 111 aa10.62□□□□□ -0.71
MSH6-204ENST00000445503 B3GALT1Q9Y5Z6 326 aa10.62□□□□□ -0.71
MSH6-204ENST00000445503 ABCA7Q8IZY2 2146 aa10.61□□□□□ -0.71
MSH6-204ENST00000445503 TAS2R31P59538 309 aa10.61□□□□□ -0.71
MSH6-204ENST00000445503 NICN1Q9BSH3 213 aa10.61□□□□□ -0.71
MSH6-204ENST00000445503 BCL2L14Q9BZR8 327 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms