RNA–Protein interactions for RNA: ENST00000429440.5

CDC42BPA-206, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 2

Gene CDC42BPA, Length 2,501 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-206ENST00000429440 IKZF2Q9UKS7 526 aa7.97□□□□□ -1.13
CDC42BPA-206ENST00000429440 NTNG1Q9Y2I2 539 aa7.97□□□□□ -1.13
CDC42BPA-206ENST00000429440 THSD7BQ9C0I4 1608 aa7.97□□□□□ -1.13
CDC42BPA-206ENST00000429440 GREB1Q4ZG55 1949 aa7.97□□□□□ -1.13
CDC42BPA-206ENST00000429440 IGHV2-70DA0A0C4DH43 119 aa7.97□□□□□ -1.13
CDC42BPA-206ENST00000429440 F6UZH7 168 aa7.97□□□□□ -1.13
CDC42BPA-206ENST00000429440 PIN1P1O15428 100 aa7.97□□□□□ -1.13
CDC42BPA-206ENST00000429440 NDUFB8O95169 186 aa7.97□□□□□ -1.13
CDC42BPA-206ENST00000429440 ZNF735P0CB33 412 aa7.97□□□□□ -1.13
CDC42BPA-206ENST00000429440 PET100P0DJ07 73 aa7.97□□□□□ -1.13
CDC42BPA-206ENST00000429440 TMEM225BP0DP42 221 aa7.97□□□□□ -1.13
CDC42BPA-206ENST00000429440 TFPI2P48307 235 aa7.97□□□□□ -1.13
CDC42BPA-206ENST00000429440 PDE7AQ13946 482 aa7.97□□□□□ -1.13
CDC42BPA-206ENST00000429440 C4orf17Q53FE4 359 aa7.97□□□□□ -1.13
CDC42BPA-206ENST00000429440 STPG1Q5TH74 334 aa7.97□□□□□ -1.13
CDC42BPA-206ENST00000429440 RPUSD3Q6P087 351 aaKnown RBP7.97□□□□□ -1.13
CDC42BPA-206ENST00000429440 CHST9Q7L1S5 443 aa7.97□□□□□ -1.13
CDC42BPA-206ENST00000429440 RTN4RL1Q86UN2 441 aaPredicted RBP7.97□□□□□ -1.13
CDC42BPA-206ENST00000429440 ZNF683Q8IZ20 524 aa7.97□□□□□ -1.13
CDC42BPA-206ENST00000429440 ZNF433Q8N7K0 673 aaPredicted RBP7.97□□□□□ -1.13
CDC42BPA-206ENST00000429440 OR5D18Q8NGL1 313 aa7.97□□□□□ -1.13
CDC42BPA-206ENST00000429440 OR4X1Q8NH49 305 aa7.97□□□□□ -1.13
CDC42BPA-206ENST00000429440 THAP3Q8WTV1 239 aaPredicted RBP7.97□□□□□ -1.13
CDC42BPA-206ENST00000429440 MS4A6EQ96DS6 147 aa7.97□□□□□ -1.13
CDC42BPA-206ENST00000429440 TVP23CQ96ET8 276 aa7.97□□□□□ -1.13
CDC42BPA-206ENST00000429440 OR8B4Q96RC9 309 aa7.97□□□□□ -1.13
CDC42BPA-206ENST00000429440 GPR174Q9BXC1 333 aa7.97□□□□□ -1.13
CDC42BPA-206ENST00000429440 TBL1XR1Q9BZK7 514 aa7.97□□□□□ -1.13
CDC42BPA-206ENST00000429440 CXorf36Q9H7Y0 433 aa7.97□□□□□ -1.13
CDC42BPA-206ENST00000429440 IL19Q9UHD0 177 aa7.97□□□□□ -1.13
CDC42BPA-206ENST00000429440 STRAPQ9Y3F4 350 aaKnown RBP7.97□□□□□ -1.13
CDC42BPA-206ENST00000429440 CLEC18AA5D8T8 446 aa7.96□□□□□ -1.13
CDC42BPA-206ENST00000429440 GPR89AB7ZAQ6 455 aa7.96□□□□□ -1.13
CDC42BPA-206ENST00000429440 FTCDNL1E5RQL4 147 aa7.96□□□□□ -1.13
CDC42BPA-206ENST00000429440 PEX12O00623 359 aa7.96□□□□□ -1.13
CDC42BPA-206ENST00000429440 SLC2A10O95528 541 aa7.96□□□□□ -1.13
CDC42BPA-206ENST00000429440 SCGB1D1O95968 90 aa7.96□□□□□ -1.13
CDC42BPA-206ENST00000429440 AMY2AP04746 511 aa7.96□□□□□ -1.13
CDC42BPA-206ENST00000429440 SEC11BP0C7V7 166 aa7.96□□□□□ -1.13
CDC42BPA-206ENST00000429440 GPR89BP0CG08 455 aa7.96□□□□□ -1.13
CDC42BPA-206ENST00000429440 HOXB2P14652 356 aa7.96□□□□□ -1.13
CDC42BPA-206ENST00000429440 SERPINA2P20848 420 aa7.96□□□□□ -1.13
CDC42BPA-206ENST00000429440 AOAHP28039 575 aa7.96□□□□□ -1.13
CDC42BPA-206ENST00000429440 SLC6A12P48065 614 aa7.96□□□□□ -1.13
CDC42BPA-206ENST00000429440 SNRPNP63162 240 aaKnown RBP7.96□□□□□ -1.13
CDC42BPA-206ENST00000429440 SIRPAP78324 504 aa7.96□□□□□ -1.13
CDC42BPA-206ENST00000429440 LTBQ06643 244 aa7.96□□□□□ -1.13
CDC42BPA-206ENST00000429440 PRDX4Q13162 271 aa7.96□□□□□ -1.13
CDC42BPA-206ENST00000429440 PPP1R1AQ13522 171 aa7.96□□□□□ -1.13
CDC42BPA-206ENST00000429440 ELOCQ15369 112 aa7.96□□□□□ -1.13
CDC42BPA-206ENST00000429440 OCIAD2Q56VL3 154 aa7.96□□□□□ -1.13
CDC42BPA-206ENST00000429440 LEG1Q6P5S2 330 aa7.96□□□□□ -1.13
CDC42BPA-206ENST00000429440 DPY19L2P2Q6ZN68 376 aa7.96□□□□□ -1.13
CDC42BPA-206ENST00000429440 SCN4BQ8IWT1 228 aa7.96□□□□□ -1.13
CDC42BPA-206ENST00000429440 CLEC18CQ8NCF0 446 aa7.96□□□□□ -1.13
CDC42BPA-206ENST00000429440 KLHDC9Q8NEP7 349 aa7.96□□□□□ -1.13
CDC42BPA-206ENST00000429440 AUTS2Q8WXX7 1259 aa7.96□□□□□ -1.13
CDC42BPA-206ENST00000429440 MOAP1Q96BY2 351 aa7.96□□□□□ -1.13
CDC42BPA-206ENST00000429440 MAGT1Q9H0U3 335 aa7.96□□□□□ -1.13
CDC42BPA-206ENST00000429440 CNTD2Q9H8S5 307 aa7.96□□□□□ -1.13
CDC42BPA-206ENST00000429440 SYNPO2LQ9H987 977 aa7.96□□□□□ -1.13
CDC42BPA-206ENST00000429440 GPR35Q9HC97 309 aa7.96□□□□□ -1.13
CDC42BPA-206ENST00000429440 RNF150Q9ULK6 438 aa7.96□□□□□ -1.13
CDC42BPA-206ENST00000429440 HS3ST4Q9Y661 456 aa7.96□□□□□ -1.13
CDC42BPA-206ENST00000429440 XKRY2A2RUG3 117 aa7.96□□□□□ -1.14
CDC42BPA-206ENST00000429440 XKRYO14609 159 aa7.96□□□□□ -1.14
CDC42BPA-206ENST00000429440 CDC40O60508 579 aaKnown RBP eCLIP7.96□□□□□ -1.14
CDC42BPA-206ENST00000429440 FCMRO60667 390 aa7.96□□□□□ -1.14
CDC42BPA-206ENST00000429440 SRPX2O60687 465 aaPredicted RBP7.96□□□□□ -1.14
CDC42BPA-206ENST00000429440 CSTAP01040 98 aa7.96□□□□□ -1.14
CDC42BPA-206ENST00000429440 ZNF7P17097 686 aaPredicted RBP7.96□□□□□ -1.14
CDC42BPA-206ENST00000429440 NDUFV2P19404 249 aa7.96□□□□□ -1.14
CDC42BPA-206ENST00000429440 TIA1P31483 386 aaKnown RBP eCLIP7.96□□□□□ -1.14
CDC42BPA-206ENST00000429440 CRMP1Q14194 572 aa7.96□□□□□ -1.14
CDC42BPA-206ENST00000429440 GAS6Q14393 721 aa7.96□□□□□ -1.14
CDC42BPA-206ENST00000429440 EBPQ15125 230 aaKnown RBP7.96□□□□□ -1.14
CDC42BPA-206ENST00000429440 OPN5Q6U736 354 aa7.96□□□□□ -1.14
CDC42BPA-206ENST00000429440 NXPE4Q6UWF7 544 aa7.96□□□□□ -1.14
CDC42BPA-206ENST00000429440 SLC26A10Q8NG04 563 aa7.96□□□□□ -1.14
CDC42BPA-206ENST00000429440 OR8S1Q8NH09 359 aa7.96□□□□□ -1.14
CDC42BPA-206ENST00000429440 OR5AK3PQ8NH89 298 aa7.96□□□□□ -1.14
CDC42BPA-206ENST00000429440 LIPHQ8WWY8 451 aa7.96□□□□□ -1.14
CDC42BPA-206ENST00000429440 DVL3Q92997 716 aaPredicted RBP7.96□□□□□ -1.14
CDC42BPA-206ENST00000429440 NEURL3Q96EH8 262 aa7.96□□□□□ -1.14
CDC42BPA-206ENST00000429440 CST11Q9H112 138 aa7.96□□□□□ -1.14
CDC42BPA-206ENST00000429440 RBKSQ9H477 322 aa7.96□□□□□ -1.14
CDC42BPA-206ENST00000429440 SRD5A3Q9H8P0 318 aa7.96□□□□□ -1.14
CDC42BPA-206ENST00000429440 CNIH4Q9P003 139 aa7.96□□□□□ -1.14
CDC42BPA-206ENST00000429440 MARCH2Q9P0N8 246 aa7.96□□□□□ -1.14
CDC42BPA-206ENST00000429440 LAMA2P24043 3122 aaKnown RBP7.95□□□□□ -1.14
CDC42BPA-206ENST00000429440 CASP8AP2Q9UKL3 1982 aa7.95□□□□□ -1.14
CDC42BPA-206ENST00000429440 AQP7O14520 342 aa7.95□□□□□ -1.14
CDC42BPA-206ENST00000429440 HSD17B6O14756 317 aa7.95□□□□□ -1.14
CDC42BPA-206ENST00000429440 SMAD9O15198 467 aaKnown RBP7.95□□□□□ -1.14
CDC42BPA-206ENST00000429440 PRAMEF4O60810 478 aa7.95□□□□□ -1.14
CDC42BPA-206ENST00000429440 KAT7O95251 611 aa7.95□□□□□ -1.14
CDC42BPA-206ENST00000429440 ARR3P36575 388 aa7.95□□□□□ -1.14
CDC42BPA-206ENST00000429440 TSFMP43897 325 aaKnown RBP7.95□□□□□ -1.14
CDC42BPA-206ENST00000429440 ELLP55199 621 aaPredicted RBP7.95□□□□□ -1.14
CDC42BPA-206ENST00000429440 GUCA2AQ02747 115 aa7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 81.8 ms