RNA–Protein interactions for RNA: ENST00000426280.3

GPC1-204, Transcript of glypican 1, humanhuman

TSL 3

Gene GPC1, Length 636 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-204ENST00000426280 OR2T4Q8NH00 348 aa10.79□□□□□ -0.68
GPC1-204ENST00000426280 SNX33Q8WV41 574 aa10.79□□□□□ -0.68
GPC1-204ENST00000426280 HPS1Q92902 700 aa10.79□□□□□ -0.68
GPC1-204ENST00000426280 MBOAT4Q96T53 435 aa10.79□□□□□ -0.68
GPC1-204ENST00000426280 BEX2Q9BXY8 128 aa10.79□□□□□ -0.68
GPC1-204ENST00000426280 OR51V1Q9H2C8 321 aa10.79□□□□□ -0.68
GPC1-204ENST00000426280 DECR2Q9NUI1 292 aa10.79□□□□□ -0.68
GPC1-204ENST00000426280 TMEM160Q9NX00 188 aa10.79□□□□□ -0.68
GPC1-204ENST00000426280 WIPI2Q9Y4P8 454 aa10.79□□□□□ -0.68
GPC1-204ENST00000426280 IGHV3-64DA0A0J9YX35 117 aa10.78□□□□□ -0.68
GPC1-204ENST00000426280 PRR23D1E9PI22 279 aaPredicted RBP10.78□□□□□ -0.68
GPC1-204ENST00000426280 F5H5K5 113 aa10.78□□□□□ -0.68
GPC1-204ENST00000426280 TPD52L2O43399 206 aaKnown RBP10.78□□□□□ -0.68
GPC1-204ENST00000426280 AVPP01185 164 aa10.78□□□□□ -0.68
GPC1-204ENST00000426280 HLA-DQA2P01906 255 aa10.78□□□□□ -0.68
GPC1-204ENST00000426280 ADH4P08319 380 aa10.78□□□□□ -0.68
GPC1-204ENST00000426280 ACSM4P0C7M7 580 aa10.78□□□□□ -0.68
GPC1-204ENST00000426280 PRR23D2P0DMB1 279 aaPredicted RBP10.78□□□□□ -0.68
GPC1-204ENST00000426280 SELEP16581 610 aa10.78□□□□□ -0.68
GPC1-204ENST00000426280 PCGF3Q3KNV8 242 aa10.78□□□□□ -0.68
GPC1-204ENST00000426280 LINC01590Q5TEZ4 76 aa10.78□□□□□ -0.68
GPC1-204ENST00000426280 COLCA1Q6ZS62 124 aa10.78□□□□□ -0.68
GPC1-204ENST00000426280 TCEANCQ8N8B7 351 aa10.78□□□□□ -0.68
GPC1-204ENST00000426280 LINC01356Q8N9X3 169 aa10.78□□□□□ -0.68
GPC1-204ENST00000426280 OR6K6Q8NGW6 343 aa10.78□□□□□ -0.68
GPC1-204ENST00000426280 CCL17Q92583 94 aa10.78□□□□□ -0.68
GPC1-204ENST00000426280 UBE2FQ969M7 185 aa10.78□□□□□ -0.68
GPC1-204ENST00000426280 PLEKHA8Q96JA3 519 aa10.78□□□□□ -0.68
GPC1-204ENST00000426280 COQ7Q99807 217 aa10.78□□□□□ -0.68
GPC1-204ENST00000426280 TOR3AQ9H497 397 aa10.78□□□□□ -0.68
GPC1-204ENST00000426280 DCLRE1BQ9H816 532 aa10.78□□□□□ -0.68
GPC1-204ENST00000426280 GPR160Q9UJ42 338 aa10.78□□□□□ -0.68
GPC1-204ENST00000426280 KCNS2Q9ULS6 477 aa10.78□□□□□ -0.68
GPC1-204ENST00000426280 POLR1DQ9Y2S0 133 aa10.78□□□□□ -0.68
GPC1-204ENST00000426280 DNHD1Q96M86 4753 aa10.78□□□□□ -0.68
GPC1-204ENST00000426280 H0YHG0 523 aa10.77□□□□□ -0.69
GPC1-204ENST00000426280 DLGAP1O14490 977 aa10.77□□□□□ -0.69
GPC1-204ENST00000426280 TIMM8AO60220 97 aaPredicted RBP10.77□□□□□ -0.69
GPC1-204ENST00000426280 FAM157CP0CG43 387 aa10.77□□□□□ -0.69
GPC1-204ENST00000426280 PMELP40967 661 aa10.77□□□□□ -0.69
GPC1-204ENST00000426280 RAD23AP54725 363 aa10.77□□□□□ -0.69
GPC1-204ENST00000426280 TNFAIP6P98066 277 aaPredicted RBP10.77□□□□□ -0.69
GPC1-204ENST00000426280 HOXA4Q00056 320 aaPredicted RBP10.77□□□□□ -0.69
GPC1-204ENST00000426280 MOGQ16653 247 aa10.77□□□□□ -0.69
GPC1-204ENST00000426280 KLHL12Q53G59 568 aa10.77□□□□□ -0.69
GPC1-204ENST00000426280 CXXC5Q7LFL8 322 aaKnown RBP10.77□□□□□ -0.69
GPC1-204ENST00000426280 OR2Z1Q8NG97 314 aa10.77□□□□□ -0.69
GPC1-204ENST00000426280 ITLN1Q8WWA0 313 aa10.77□□□□□ -0.69
GPC1-204ENST00000426280 ZMYND19Q96E35 227 aaPredicted RBP10.77□□□□□ -0.69
GPC1-204ENST00000426280 IL4I1Q96RQ9 567 aa10.77□□□□□ -0.69
GPC1-204ENST00000426280 DCLRE1CQ96SD1 692 aaKnown RBP10.77□□□□□ -0.69
GPC1-204ENST00000426280 AMELYQ99218 206 aa10.77□□□□□ -0.69
GPC1-204ENST00000426280 PITX2Q99697 317 aa10.77□□□□□ -0.69
GPC1-204ENST00000426280 SHARPINQ9H0F6 387 aa10.77□□□□□ -0.69
GPC1-204ENST00000426280 SAP30LQ9HAJ7 183 aa10.77□□□□□ -0.69
GPC1-204ENST00000426280 ENOPH1Q9UHY7 261 aa10.77□□□□□ -0.69
GPC1-204ENST00000426280 ORC6Q9Y5N6 252 aa10.77□□□□□ -0.69
GPC1-204ENST00000426280 JMJD1CQ15652 2540 aa10.76□□□□□ -0.69
GPC1-204ENST00000426280 PLSCR5A0PG75 271 aa10.76□□□□□ -0.69
GPC1-204ENST00000426280 E9PQ18 207 aa10.76□□□□□ -0.69
GPC1-204ENST00000426280 H3BSA7 217 aa10.76□□□□□ -0.69
GPC1-204ENST00000426280 CASQ2O14958 399 aaPredicted RBP10.76□□□□□ -0.69
GPC1-204ENST00000426280 MLNRO43193 412 aa10.76□□□□□ -0.69
GPC1-204ENST00000426280 GLCEO94923 617 aa10.76□□□□□ -0.69
GPC1-204ENST00000426280 CD55P08174 381 aa10.76□□□□□ -0.69
GPC1-204ENST00000426280 RAC2P15153 192 aa10.76□□□□□ -0.69
GPC1-204ENST00000426280 PAICSP22234 425 aaKnown RBP10.76□□□□□ -0.69
GPC1-204ENST00000426280 SLC2A5P22732 501 aa10.76□□□□□ -0.69
GPC1-204ENST00000426280 FMO3P31513 532 aa10.76□□□□□ -0.69
GPC1-204ENST00000426280 EFNB1P98172 346 aa10.76□□□□□ -0.69
GPC1-204ENST00000426280 SNAI3Q3KNW1 292 aa10.76□□□□□ -0.69
GPC1-204ENST00000426280 FAM209AQ5JX71 171 aa10.76□□□□□ -0.69
GPC1-204ENST00000426280 ARL9Q6T311 187 aa10.76□□□□□ -0.69
GPC1-204ENST00000426280 FBXW12Q6X9E4 464 aa10.76□□□□□ -0.69
GPC1-204ENST00000426280 C1orf229Q6ZS94 237 aaPredicted RBP10.76□□□□□ -0.69
GPC1-204ENST00000426280 SPATC1Q76KD6 591 aa10.76□□□□□ -0.69
GPC1-204ENST00000426280 OR2AJ1Q8NGZ0 328 aa10.76□□□□□ -0.69
GPC1-204ENST00000426280 SIGLEC11Q96RL6 698 aa10.76□□□□□ -0.69
GPC1-204ENST00000426280 ATF6BQ99941 703 aa10.76□□□□□ -0.69
GPC1-204ENST00000426280 CDADC1Q9BWV3 514 aa10.76□□□□□ -0.69
GPC1-204ENST00000426280 C1QTNF5Q9BXJ0 243 aa10.76□□□□□ -0.69
GPC1-204ENST00000426280 TEX12Q9BXU0 123 aa10.76□□□□□ -0.69
GPC1-204ENST00000426280 HDHD2Q9H0R4 259 aa10.76□□□□□ -0.69
GPC1-204ENST00000426280 RNPEPL1Q9HAU8 725 aa10.76□□□□□ -0.69
GPC1-204ENST00000426280 AASSQ9UDR5 926 aa10.76□□□□□ -0.69
GPC1-204ENST00000426280 CDC42EP3Q9UKI2 254 aa10.76□□□□□ -0.69
GPC1-204ENST00000426280 COMMD3-BMI1R4GMX3 469 aa10.76□□□□□ -0.69
GPC1-204ENST00000426280 SVEP1Q4LDE5 3571 aa10.76□□□□□ -0.69
GPC1-204ENST00000426280 CCDC182A6NF36 153 aa10.75□□□□□ -0.69
GPC1-204ENST00000426280 ZNF593O00488 134 aaPredicted RBP10.75□□□□□ -0.69
GPC1-204ENST00000426280 PLPP2O43688 288 aa10.75□□□□□ -0.69
GPC1-204ENST00000426280 HLA-DPB1P04440 258 aa10.75□□□□□ -0.69
GPC1-204ENST00000426280 SLC2A1P11166 492 aa10.75□□□□□ -0.69
GPC1-204ENST00000426280 ZNF823P16415 610 aa10.75□□□□□ -0.69
GPC1-204ENST00000426280 GSTT1P30711 240 aa10.75□□□□□ -0.69
GPC1-204ENST00000426280 DVL1P1P54792 670 aaPredicted RBP10.75□□□□□ -0.69
GPC1-204ENST00000426280 SLC34A1Q06495 639 aa10.75□□□□□ -0.69
GPC1-204ENST00000426280 APOFQ13790 326 aa10.75□□□□□ -0.69
GPC1-204ENST00000426280 GK2Q14410 553 aaPredicted RBP10.75□□□□□ -0.69
GPC1-204ENST00000426280 PCK2Q16822 640 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms