RNA–Protein interactions for RNA: ENST00000424265.5

USP54-205, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 2

Gene USP54, Length 5,201 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-205ENST00000424265 ALDH3B1P43353 468 aa8.86□□□□□ -0.99
USP54-205ENST00000424265 ZNF41P51814 821 aaPredicted RBP8.86□□□□□ -0.99
USP54-205ENST00000424265 GFERP55789 205 aa8.86□□□□□ -0.99
USP54-205ENST00000424265 LSM11P83369 360 aaKnown RBP eCLIP8.86□□□□□ -0.99
USP54-205ENST00000424265 ELOA3BQ3SY89 546 aa8.86□□□□□ -0.99
USP54-205ENST00000424265 TMEM91Q6ZNR0 172 aa8.86□□□□□ -0.99
USP54-205ENST00000424265 MORN4Q8NDC4 146 aa8.86□□□□□ -0.99
USP54-205ENST00000424265 ELOA3Q8NG57 546 aa8.86□□□□□ -0.99
USP54-205ENST00000424265 C15orf40Q8WUR7 153 aa8.86□□□□□ -0.99
USP54-205ENST00000424265 NUDCD2Q8WVJ2 157 aa8.86□□□□□ -0.99
USP54-205ENST00000424265 STARD5Q9NSY2 213 aa8.86□□□□□ -0.99
USP54-205ENST00000424265 GXYLT2A0PJZ3 443 aa8.86□□□□□ -0.99
USP54-205ENST00000424265 MFNGO00587 321 aa8.86□□□□□ -0.99
USP54-205ENST00000424265 CCSO14618 274 aa8.86□□□□□ -0.99
USP54-205ENST00000424265 IL5P05113 134 aa8.86□□□□□ -0.99
USP54-205ENST00000424265 CD34P28906 385 aa8.86□□□□□ -0.99
USP54-205ENST00000424265 OTX2P32243 289 aa8.86□□□□□ -0.99
USP54-205ENST00000424265 COMPP49747 757 aaPredicted RBP8.86□□□□□ -0.99
USP54-205ENST00000424265 OR2G6Q5TZ20 316 aa8.86□□□□□ -0.99
USP54-205ENST00000424265 ZNF573Q86YE8 665 aa8.86□□□□□ -0.99
USP54-205ENST00000424265 ZNF100Q8IYN0 542 aa8.86□□□□□ -0.99
USP54-205ENST00000424265 DND1Q8IYX4 353 aaKnown RBP8.86□□□□□ -0.99
USP54-205ENST00000424265 CLECL1Q8IZS7 167 aa8.86□□□□□ -0.99
USP54-205ENST00000424265 SUMF2Q8NBJ7 301 aa8.86□□□□□ -0.99
USP54-205ENST00000424265 OR9Q2Q8NGE9 314 aa8.86□□□□□ -0.99
USP54-205ENST00000424265 OR52B4Q8NGK2 314 aa8.86□□□□□ -0.99
USP54-205ENST00000424265 SIGLEC11Q96RL6 698 aa8.86□□□□□ -0.99
USP54-205ENST00000424265 STACQ99469 402 aa8.86□□□□□ -0.99
USP54-205ENST00000424265 HRASLSQ9HDD0 168 aa8.86□□□□□ -0.99
USP54-205ENST00000424265 ALPK3Q96L96 1907 aa8.86□□□□□ -0.99
USP54-205ENST00000424265 MASP2O00187 686 aa8.85□□□□□ -0.99
USP54-205ENST00000424265 MPGP29372 298 aa8.85□□□□□ -0.99
USP54-205ENST00000424265 RBX1P62877 108 aa8.85□□□□□ -0.99
USP54-205ENST00000424265 FABP5Q01469 135 aa8.85□□□□□ -0.99
USP54-205ENST00000424265 ZIC1Q15915 447 aa8.85□□□□□ -0.99
USP54-205ENST00000424265 ZNF813Q6ZN06 617 aa8.85□□□□□ -0.99
USP54-205ENST00000424265 TMEM18Q96B42 140 aa8.85□□□□□ -0.99
USP54-205ENST00000424265 NEURL3Q96EH8 262 aa8.85□□□□□ -0.99
USP54-205ENST00000424265 OR2A5Q96R48 311 aa8.85□□□□□ -0.99
USP54-205ENST00000424265 POLR2J3Q9H1A7 115 aaKnown RBP8.85□□□□□ -0.99
USP54-205ENST00000424265 AQP7P3A6NL99 342 aa8.85□□□□□ -0.99
USP54-205ENST00000424265 CYR61O00622 381 aa8.85□□□□□ -0.99
USP54-205ENST00000424265 CXCR1P25024 350 aa8.85□□□□□ -0.99
USP54-205ENST00000424265 RAP1BP61224 184 aa8.85□□□□□ -0.99
USP54-205ENST00000424265 NDUFAF7Q7L592 441 aa8.85□□□□□ -0.99
USP54-205ENST00000424265 CA13Q8N1Q1 262 aa8.85□□□□□ -0.99
USP54-205ENST00000424265 SDR9C7Q8NEX9 313 aa8.85□□□□□ -0.99
USP54-205ENST00000424265 TMED3Q9Y3Q3 217 aa8.85□□□□□ -0.99
USP54-205ENST00000424265 A0A0A6YYD5 115 aa8.85□□□□□ -0.99
USP54-205ENST00000424265 J3KRW8 73 aa8.85□□□□□ -0.99
USP54-205ENST00000424265 DVL1P1P54792 670 aaPredicted RBP8.85□□□□□ -0.99
USP54-205ENST00000424265 ZNF468Q5VIY5 522 aaPredicted RBP8.85□□□□□ -0.99
USP54-205ENST00000424265 ZNF774Q6NX45 483 aa8.85□□□□□ -0.99
USP54-205ENST00000424265 PAQR6Q6TCH4 344 aa8.85□□□□□ -0.99
USP54-205ENST00000424265 DYRK2Q92630 601 aa8.85□□□□□ -0.99
USP54-205ENST00000424265 CDS1Q92903 461 aa8.85□□□□□ -0.99
USP54-205ENST00000424265 OR8B4Q96RC9 309 aa8.85□□□□□ -0.99
USP54-205ENST00000424265 LPAR2Q9HBW0 351 aa8.85□□□□□ -0.99
USP54-205ENST00000424265 FAM171A2A8MVW0 826 aa8.85□□□□□ -0.99
USP54-205ENST00000424265 TLX3O43711 291 aaPredicted RBP8.85□□□□□ -0.99
USP54-205ENST00000424265 SCGB1D2O95969 90 aa8.85□□□□□ -0.99
USP54-205ENST00000424265 F13BP05160 661 aa8.85□□□□□ -0.99
USP54-205ENST00000424265 TFPIP10646 304 aa8.85□□□□□ -0.99
USP54-205ENST00000424265 MST1P26927 711 aa8.85□□□□□ -0.99
USP54-205ENST00000424265 MTNR1BP49286 362 aa8.85□□□□□ -0.99
USP54-205ENST00000424265 PRR27Q6MZM9 219 aa8.85□□□□□ -0.99
USP54-205ENST00000424265 KCNRGQ8N5I3 272 aa8.85□□□□□ -0.99
USP54-205ENST00000424265 EXOSC3Q9NQT5 275 aaKnown RBP8.85□□□□□ -0.99
USP54-205ENST00000424265 COL4A4P53420 1690 aaPredicted RBP8.84□□□□□ -0.99
USP54-205ENST00000424265 SERPINE3A8MV23 424 aa8.84□□□□□ -0.99
USP54-205ENST00000424265 NME6O75414 186 aaPredicted RBP8.84□□□□□ -0.99
USP54-205ENST00000424265 P04436 131 aa8.84□□□□□ -0.99
USP54-205ENST00000424265 OR1D4P47884 311 aa8.84□□□□□ -0.99
USP54-205ENST00000424265 MMP15P51511 669 aa8.84□□□□□ -0.99
USP54-205ENST00000424265 ZNF585AQ6P3V2 769 aa8.84□□□□□ -0.99
USP54-205ENST00000424265 SLC35D2Q76EJ3 337 aa8.84□□□□□ -0.99
USP54-205ENST00000424265 OR4N5Q8IXE1 308 aa8.84□□□□□ -0.99
USP54-205ENST00000424265 OR52N4Q8NGI2 321 aa8.84□□□□□ -0.99
USP54-205ENST00000424265 FAAP24Q9BTP7 215 aa8.84□□□□□ -0.99
USP54-205ENST00000424265 CHST11Q9NPF2 352 aa8.84□□□□□ -0.99
USP54-205ENST00000424265 LOC105378220A0A1B0GUY1 285 aaPredicted RBP8.84□□□□□ -0.99
USP54-205ENST00000424265 ARAFP10398 606 aa8.84□□□□□ -0.99
USP54-205ENST00000424265 PMELP40967 661 aa8.84□□□□□ -0.99
USP54-205ENST00000424265 UBE2MP61081 183 aaKnown RBP8.84□□□□□ -0.99
USP54-205ENST00000424265 H3F3AP84243 136 aa8.84□□□□□ -0.99
USP54-205ENST00000424265 C19orf48Q6RUI8 117 aa8.84□□□□□ -0.99
USP54-205ENST00000424265 DIRC2Q96SL1 478 aa8.84□□□□□ -0.99
USP54-205ENST00000424265 MESP1Q9BRJ9 268 aa8.84□□□□□ -0.99
USP54-205ENST00000424265 CAMK2AQ9UQM7 478 aa8.84□□□□□ -0.99
USP54-205ENST00000424265 A0A0U1RQV5 110 aa8.84□□□□□ -0.99
USP54-205ENST00000424265 ADAP1O75689 374 aa8.84□□□□□ -0.99
USP54-205ENST00000424265 CAV2P51636 162 aa8.84□□□□□ -0.99
USP54-205ENST00000424265 SLC16A1P53985 500 aa8.84□□□□□ -0.99
USP54-205ENST00000424265 ERVFRD-1P60508 538 aa8.84□□□□□ -0.99
USP54-205ENST00000424265 PLGLB1Q02325 96 aa8.84□□□□□ -0.99
USP54-205ENST00000424265 TAF9Q16594 264 aa8.84□□□□□ -0.99
USP54-205ENST00000424265 FCRL6Q6DN72 434 aa8.84□□□□□ -0.99
USP54-205ENST00000424265 C1orf87Q8N0U7 546 aa8.84□□□□□ -0.99
USP54-205ENST00000424265 OR2D3Q8NGH3 330 aa8.84□□□□□ -0.99
USP54-205ENST00000424265 DUSP19Q8WTR2 217 aa8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms