RNA–Protein interactions for RNA: ENST00000402434.6

RTN4-207, Transcript of reticulon 4, humanhuman

TSL 5 BASIC

Gene RTN4, Length 1,456 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-207ENST00000402434 AMELYQ99218 206 aa16.34■□□□□ 0.21
RTN4-207ENST00000402434 BPESC1Q9GZL8 116 aa16.34■□□□□ 0.21
RTN4-207ENST00000402434 TOR3AQ9H497 397 aa16.34■□□□□ 0.21
RTN4-207ENST00000402434 CHODLQ9H9P2 273 aa16.34■□□□□ 0.21
RTN4-207ENST00000402434 NSD1Q96L73 2696 aaPredicted RBP16.33■□□□□ 0.21
RTN4-207ENST00000402434 HIVEP2P31629 2446 aa16.33■□□□□ 0.2
RTN4-207ENST00000402434 E9PQ18 207 aa16.33■□□□□ 0.2
RTN4-207ENST00000402434 SPRY3O43610 288 aa16.33■□□□□ 0.2
RTN4-207ENST00000402434 CD55P08174 381 aa16.33■□□□□ 0.2
RTN4-207ENST00000402434 ALOX5APP20292 161 aa16.33■□□□□ 0.2
RTN4-207ENST00000402434 OPRL1P41146 370 aa16.33■□□□□ 0.2
RTN4-207ENST00000402434 CRYBB2P43320 205 aa16.33■□□□□ 0.2
RTN4-207ENST00000402434 SLC6A9P48067 706 aa16.33■□□□□ 0.2
RTN4-207ENST00000402434 PRKXP51817 358 aa16.33■□□□□ 0.2
RTN4-207ENST00000402434 GK2Q14410 553 aaPredicted RBP16.33■□□□□ 0.2
RTN4-207ENST00000402434 TAF13Q15543 124 aa16.33■□□□□ 0.2
RTN4-207ENST00000402434 Q6ZR03 302 aa16.33■□□□□ 0.2
RTN4-207ENST00000402434 MEPCEQ7L2J0 689 aaKnown RBP16.33■□□□□ 0.2
RTN4-207ENST00000402434 SLC16A9Q7RTY1 509 aa16.33■□□□□ 0.2
RTN4-207ENST00000402434 YIPF5Q969M3 257 aa16.33■□□□□ 0.2
RTN4-207ENST00000402434 IL4I1Q96RQ9 567 aa16.33■□□□□ 0.2
RTN4-207ENST00000402434 C9orf16Q9BUW7 83 aa16.33■□□□□ 0.2
RTN4-207ENST00000402434 YIPF3Q9GZM5 350 aa16.33■□□□□ 0.2
RTN4-207ENST00000402434 RIBC2Q9H4K1 309 aa16.33■□□□□ 0.2
RTN4-207ENST00000402434 DECR2Q9NUI1 292 aa16.33■□□□□ 0.2
RTN4-207ENST00000402434 RP2O75695 350 aa16.32■□□□□ 0.2
RTN4-207ENST00000402434 LYNP07948 512 aa16.32■□□□□ 0.2
RTN4-207ENST00000402434 ANOS1P23352 680 aa16.32■□□□□ 0.2
RTN4-207ENST00000402434 NAA10P41227 235 aaPredicted RBP16.32■□□□□ 0.2
RTN4-207ENST00000402434 TMEM33P57088 247 aa16.32■□□□□ 0.2
RTN4-207ENST00000402434 GABPB1Q06547 395 aaPredicted RBP16.32■□□□□ 0.2
RTN4-207ENST00000402434 MALLQ13021 153 aa16.32■□□□□ 0.2
RTN4-207ENST00000402434 GGTLC2Q14390 218 aa16.32■□□□□ 0.2
RTN4-207ENST00000402434 TSTQ16762 297 aaKnown RBP16.32■□□□□ 0.2
RTN4-207ENST00000402434 SNAI3Q3KNW1 292 aa16.32■□□□□ 0.2
RTN4-207ENST00000402434 LCN1P1Q5VSP4 162 aa16.32■□□□□ 0.2
RTN4-207ENST00000402434 OR2T2Q6IF00 324 aa16.32■□□□□ 0.2
RTN4-207ENST00000402434 SPATC1Q76KD6 591 aa16.32■□□□□ 0.2
RTN4-207ENST00000402434 BCDIN3DQ7Z5W3 292 aaKnown RBP16.32■□□□□ 0.2
RTN4-207ENST00000402434 OR8G5Q8NG78 346 aa16.32■□□□□ 0.2
RTN4-207ENST00000402434 SAP30LQ9HAJ7 183 aa16.32■□□□□ 0.2
RTN4-207ENST00000402434 H2AFY2Q9P0M6 372 aaPredicted RBP16.32■□□□□ 0.2
RTN4-207ENST00000402434 ORC6Q9Y5N6 252 aa16.32■□□□□ 0.2
RTN4-207ENST00000402434 A0A1B0GWJ7 208 aa16.31■□□□□ 0.2
RTN4-207ENST00000402434 IQCF6A8MYZ5 107 aa16.31■□□□□ 0.2
RTN4-207ENST00000402434 APOC1P02654 83 aa16.31■□□□□ 0.2
RTN4-207ENST00000402434 TACSTD2P09758 323 aa16.31■□□□□ 0.2
RTN4-207ENST00000402434 RAD23AP54725 363 aa16.31■□□□□ 0.2
RTN4-207ENST00000402434 ZSCAN26Q16670 478 aa16.31■□□□□ 0.2
RTN4-207ENST00000402434 OR8J1Q8NGP2 316 aa16.31■□□□□ 0.2
RTN4-207ENST00000402434 THEM6Q8WUY1 208 aa16.31■□□□□ 0.2
RTN4-207ENST00000402434 STMN2Q93045 179 aa16.31■□□□□ 0.2
RTN4-207ENST00000402434 HRASLS5Q96KN8 279 aa16.31■□□□□ 0.2
RTN4-207ENST00000402434 ZNF582Q96NG8 517 aaPredicted RBP16.31■□□□□ 0.2
RTN4-207ENST00000402434 REPIN1Q9BWE0 567 aaKnown RBP16.31■□□□□ 0.2
RTN4-207ENST00000402434 EGLN1Q9GZT9 426 aa16.31■□□□□ 0.2
RTN4-207ENST00000402434 HAO2Q9NYQ3 351 aa16.31■□□□□ 0.2
RTN4-207ENST00000402434 KLHDC2Q9Y2U9 406 aa16.31■□□□□ 0.2
RTN4-207ENST00000402434 NIPBLQ6KC79 2804 aaeCLIP16.3■□□□□ 0.21e-6■■■□□ 18.2
RTN4-207ENST00000402434 IGHV4-61A0A0C4DH41 118 aa16.3■□□□□ 0.2
RTN4-207ENST00000402434 IGHV1-69-2A0A0G2JMI3 117 aa16.3■□□□□ 0.2
RTN4-207ENST00000402434 C5orf63A6NC05 138 aa16.3■□□□□ 0.2
RTN4-207ENST00000402434 SLC22A31A6NKX4 558 aa16.3■□□□□ 0.2
RTN4-207ENST00000402434 SELEP16581 610 aa16.3■□□□□ 0.2
RTN4-207ENST00000402434 TMEM249Q2WGJ8 235 aa16.3■□□□□ 0.2
RTN4-207ENST00000402434 USP51Q70EK9 711 aa16.3■□□□□ 0.2
RTN4-207ENST00000402434 PRSS45Q7RTY3 260 aa16.3■□□□□ 0.2
RTN4-207ENST00000402434 GID4Q8IVV7 300 aa16.3■□□□□ 0.2
RTN4-207ENST00000402434 ZNF283Q8N7M2 679 aa16.3■□□□□ 0.2
RTN4-207ENST00000402434 SLC29A1Q99808 456 aa16.3■□□□□ 0.2
RTN4-207ENST00000402434 SLC30A2Q9BRI3 323 aa16.3■□□□□ 0.2
RTN4-207ENST00000402434 ZNF275Q9NSD4 429 aaPredicted RBP16.3■□□□□ 0.2
RTN4-207ENST00000402434 LAMP5Q9UJQ1 280 aa16.3■□□□□ 0.2
RTN4-207ENST00000402434 TPD52L2O43399 206 aaKnown RBP16.29■□□□□ 0.2
RTN4-207ENST00000402434 LILRA1O75019 489 aa16.29■□□□□ 0.2
RTN4-207ENST00000402434 SLC2A1P11166 492 aa16.29■□□□□ 0.2
RTN4-207ENST00000402434 HSD11B1P28845 292 aa16.29■□□□□ 0.2
RTN4-207ENST00000402434 CX3CR1P49238 355 aa16.29■□□□□ 0.2
RTN4-207ENST00000402434 HCCSP53701 268 aa16.29■□□□□ 0.2
RTN4-207ENST00000402434 ZNF92Q03936 586 aa16.29■□□□□ 0.2
RTN4-207ENST00000402434 ZBTB49Q6ZSB9 765 aa16.29■□□□□ 0.2
RTN4-207ENST00000402434 Q71RC1 249 aaPredicted RBP16.29■□□□□ 0.2
RTN4-207ENST00000402434 PGAP1Q75T13 922 aa16.29■□□□□ 0.2
RTN4-207ENST00000402434 OR5AS1Q8N127 324 aa16.29■□□□□ 0.2
RTN4-207ENST00000402434 OR2Z1Q8NG97 314 aa16.29■□□□□ 0.2
RTN4-207ENST00000402434 OR13G1Q8NGZ3 307 aa16.29■□□□□ 0.2
RTN4-207ENST00000402434 TRUB1Q8WWH5 349 aaKnown RBP16.29■□□□□ 0.2
RTN4-207ENST00000402434 SPSB4Q96A44 273 aa16.29■□□□□ 0.2
RTN4-207ENST00000402434 NIPAL2Q9H841 368 aa16.29■□□□□ 0.2
RTN4-207ENST00000402434 IL19Q9UHD0 177 aa16.29■□□□□ 0.2
RTN4-207ENST00000402434 FN1P02751 2386 aaKnown RBP16.29■□□□□ 0.2
RTN4-207ENST00000402434 ZFHX3Q15911 3703 aa16.29■□□□□ 0.2
RTN4-207ENST00000402434 SONP18583 2426 aaKnown RBP16.29■□□□□ 0.2
RTN4-207ENST00000402434 C2CD3Q4AC94 2353 aa16.29■□□□□ 0.2
RTN4-207ENST00000402434 CDC14BO60729 498 aa16.29■□□□□ 0.2
RTN4-207ENST00000402434 BAG2O95816 211 aa16.29■□□□□ 0.2
RTN4-207ENST00000402434 H2BFMP0C1H6 154 aa16.29■□□□□ 0.2
RTN4-207ENST00000402434 CDC42P60953 191 aa16.29■□□□□ 0.2
RTN4-207ENST00000402434 TNFAIP6P98066 277 aaPredicted RBP16.29■□□□□ 0.2
RTN4-207ENST00000402434 SPRNQ5BIV9 151 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms