RNA–Protein interactions for RNA: ENST00000400555.7

PPP4R1-202, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PPP4R1, Length 3,885 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-202ENST00000400555 CDH26Q8IXH8 852 aa11.3□□□□□ -0.6
PPP4R1-202ENST00000400555 LIN37Q96GY3 246 aaPredicted RBP11.3□□□□□ -0.6
PPP4R1-202ENST00000400555 PGAM5Q96HS1 289 aa11.3□□□□□ -0.6
PPP4R1-202ENST00000400555 C1orf198Q9H425 327 aa11.3□□□□□ -0.6
PPP4R1-202ENST00000400555 GDF2Q9UK05 429 aaPredicted RBP11.3□□□□□ -0.6
PPP4R1-202ENST00000400555 VSIG4Q9Y279 399 aa11.3□□□□□ -0.6
PPP4R1-202ENST00000400555 SLC33A1O00400 549 aaPredicted RBP11.3□□□□□ -0.6
PPP4R1-202ENST00000400555 ADAP1O75689 374 aa11.3□□□□□ -0.6
PPP4R1-202ENST00000400555 KLK2P20151 261 aa11.3□□□□□ -0.6
PPP4R1-202ENST00000400555 ASPHD2Q6ICH7 369 aa11.3□□□□□ -0.6
PPP4R1-202ENST00000400555 CATSPERDQ86XM0 798 aa11.3□□□□□ -0.6
PPP4R1-202ENST00000400555 OR51T1Q8NGJ9 327 aa11.3□□□□□ -0.6
PPP4R1-202ENST00000400555 TMED6Q8WW62 240 aa11.3□□□□□ -0.6
PPP4R1-202ENST00000400555 TTC9Q92623 222 aa11.3□□□□□ -0.6
PPP4R1-202ENST00000400555 PIGTQ969N2 578 aa11.3□□□□□ -0.6
PPP4R1-202ENST00000400555 AKIRIN1Q9H9L7 192 aaPredicted RBP11.3□□□□□ -0.6
PPP4R1-202ENST00000400555 RABL2AQ9UBK7 228 aaPredicted RBP11.3□□□□□ -0.6
PPP4R1-202ENST00000400555 RABL2BQ9UNT1 228 aa11.3□□□□□ -0.6
PPP4R1-202ENST00000400555 SLC5A6Q9Y289 635 aa11.3□□□□□ -0.6
PPP4R1-202ENST00000400555 MRPS28Q9Y2Q9 187 aaKnown RBP11.3□□□□□ -0.6
PPP4R1-202ENST00000400555 D6RAR5 112 aa11.3□□□□□ -0.6
PPP4R1-202ENST00000400555 TOR1AO14656 332 aa11.3□□□□□ -0.6
PPP4R1-202ENST00000400555 ZNF208O43345 1280 aa11.3□□□□□ -0.6
PPP4R1-202ENST00000400555 ZNF217O75362 1048 aa11.3□□□□□ -0.6
PPP4R1-202ENST00000400555 FARS2O95363 451 aaKnown RBP11.3□□□□□ -0.6
PPP4R1-202ENST00000400555 IGKV3-11P04433 115 aa11.3□□□□□ -0.6
PPP4R1-202ENST00000400555 BCKDHBP21953 392 aa11.3□□□□□ -0.6
PPP4R1-202ENST00000400555 GABRR1P24046 479 aa11.3□□□□□ -0.6
PPP4R1-202ENST00000400555 SERPINF1P36955 418 aa11.3□□□□□ -0.6
PPP4R1-202ENST00000400555 DAP3P51398 398 aaKnown RBP11.3□□□□□ -0.6
PPP4R1-202ENST00000400555 TMEM104Q8NE00 496 aa11.3□□□□□ -0.6
PPP4R1-202ENST00000400555 OR1M1Q8NGA1 313 aa11.3□□□□□ -0.6
PPP4R1-202ENST00000400555 DDIT4LQ96D03 193 aa11.3□□□□□ -0.6
PPP4R1-202ENST00000400555 LRRC46Q96FV0 321 aa11.3□□□□□ -0.6
PPP4R1-202ENST00000400555 PRMT8Q9NR22 394 aaPredicted RBP11.3□□□□□ -0.6
PPP4R1-202ENST00000400555 SOCS1O15524 211 aa11.29□□□□□ -0.6
PPP4R1-202ENST00000400555 CSF2RBP32927 897 aa11.29□□□□□ -0.6
PPP4R1-202ENST00000400555 PNLIPRP2P54317 469 aa11.29□□□□□ -0.6
PPP4R1-202ENST00000400555 DCAF7P61962 342 aa11.29□□□□□ -0.6
PPP4R1-202ENST00000400555 CSNK2A1P68400 391 aaPredicted RBP11.29□□□□□ -0.6
PPP4R1-202ENST00000400555 AIMP2Q13155 320 aaKnown RBP11.29□□□□□ -0.6
PPP4R1-202ENST00000400555 MYBPHQ13203 477 aa11.29□□□□□ -0.6
PPP4R1-202ENST00000400555 NKAIN1Q4KMZ8 207 aa11.29□□□□□ -0.6
PPP4R1-202ENST00000400555 NAA40Q86UY6 237 aa11.29□□□□□ -0.6
PPP4R1-202ENST00000400555 GTPBP8Q8N3Z3 284 aaPredicted RBP11.29□□□□□ -0.6
PPP4R1-202ENST00000400555 SLC38A9Q8NBW4 561 aa11.29□□□□□ -0.6
PPP4R1-202ENST00000400555 CSNK2A3Q8NEV1 391 aa11.29□□□□□ -0.6
PPP4R1-202ENST00000400555 FAM131CQ96AQ9 280 aa11.29□□□□□ -0.6
PPP4R1-202ENST00000400555 HRH4Q9H3N8 390 aa11.29□□□□□ -0.6
PPP4R1-202ENST00000400555 SERINC1Q9NRX5 453 aa11.29□□□□□ -0.6
PPP4R1-202ENST00000400555 TSPAN2O60636 221 aa11.29□□□□□ -0.6
PPP4R1-202ENST00000400555 FBXO24O75426 580 aa11.29□□□□□ -0.6
PPP4R1-202ENST00000400555 OR2A4O95047 310 aa11.29□□□□□ -0.6
PPP4R1-202ENST00000400555 TXNDC12O95881 172 aa11.29□□□□□ -0.6
PPP4R1-202ENST00000400555 F12P00748 615 aaPredicted RBP11.29□□□□□ -0.6
PPP4R1-202ENST00000400555 OR3A4PP47883 348 aa11.29□□□□□ -0.6
PPP4R1-202ENST00000400555 CLDN17P56750 224 aa11.29□□□□□ -0.6
PPP4R1-202ENST00000400555 C17orf67Q0P5P2 114 aa11.29□□□□□ -0.6
PPP4R1-202ENST00000400555 ZNF169Q14929 603 aaPredicted RBP11.29□□□□□ -0.6
PPP4R1-202ENST00000400555 RAET1LQ5VY80 246 aa11.29□□□□□ -0.6
PPP4R1-202ENST00000400555 FBXW5Q969U6 566 aa11.29□□□□□ -0.6
PPP4R1-202ENST00000400555 RAB3CQ96E17 227 aa11.29□□□□□ -0.6
PPP4R1-202ENST00000400555 OR2A7Q96R45 310 aa11.29□□□□□ -0.6
PPP4R1-202ENST00000400555 SLC25A21Q9BQT8 299 aaPredicted RBP11.29□□□□□ -0.6
PPP4R1-202ENST00000400555 NPTNQ9Y639 398 aa11.29□□□□□ -0.6
PPP4R1-202ENST00000400555 KCNMB2Q9Y691 235 aa11.29□□□□□ -0.6
PPP4R1-202ENST00000400555 EML5Q05BV3 1969 aa11.29□□□□□ -0.6
PPP4R1-202ENST00000400555 MS4A18H0YCH9 400 aa11.29□□□□□ -0.6
PPP4R1-202ENST00000400555 SCRG1O75711 98 aa11.29□□□□□ -0.6
PPP4R1-202ENST00000400555 CFHR1Q03591 330 aa11.29□□□□□ -0.6
PPP4R1-202ENST00000400555 MS4A18Q3C1V0 323 aa11.29□□□□□ -0.6
PPP4R1-202ENST00000400555 PTCRAQ6ISU1 281 aaPredicted RBP11.29□□□□□ -0.6
PPP4R1-202ENST00000400555 RGS7BPQ6MZT1 257 aaPredicted RBP11.29□□□□□ -0.6
PPP4R1-202ENST00000400555 BRICD5Q6PL45 260 aa11.29□□□□□ -0.6
PPP4R1-202ENST00000400555 OR10R2Q8NGX6 335 aa11.29□□□□□ -0.6
PPP4R1-202ENST00000400555 PRRT1Q99946 306 aa11.29□□□□□ -0.6
PPP4R1-202ENST00000400555 WDR13Q9H1Z4 485 aa11.29□□□□□ -0.6
PPP4R1-202ENST00000400555 CHST11Q9NPF2 352 aa11.29□□□□□ -0.6
PPP4R1-202ENST00000400555 CSAG2Q9Y5P2 127 aa11.29□□□□□ -0.6
PPP4R1-202ENST00000400555 FAM221AA4D161 298 aa11.28□□□□□ -0.6
PPP4R1-202ENST00000400555 SULT2B1O00204 365 aa11.28□□□□□ -0.6
PPP4R1-202ENST00000400555 RAMP1O60894 148 aa11.28□□□□□ -0.6
PPP4R1-202ENST00000400555 TIAF1O95411 115 aa11.28□□□□□ -0.6
PPP4R1-202ENST00000400555 CFIP05156 583 aa11.28□□□□□ -0.6
PPP4R1-202ENST00000400555 SPINK2P20155 84 aa11.28□□□□□ -0.6
PPP4R1-202ENST00000400555 TAGLNQ01995 201 aaKnown RBP11.28□□□□□ -0.6
PPP4R1-202ENST00000400555 PDCD1Q15116 288 aa11.28□□□□□ -0.6
PPP4R1-202ENST00000400555 TOMM40LQ969M1 308 aa11.28□□□□□ -0.6
PPP4R1-202ENST00000400555 FOXRED1Q96CU9 486 aaPredicted RBP11.28□□□□□ -0.6
PPP4R1-202ENST00000400555 EXOSC3Q9NQT5 275 aaKnown RBP11.28□□□□□ -0.6
PPP4R1-202ENST00000400555 KIF25Q9UIL4 384 aa11.28□□□□□ -0.6
PPP4R1-202ENST00000400555 SPTBN2O15020 2390 aa11.28□□□□□ -0.6
PPP4R1-202ENST00000400555 BLACEA4D250 179 aa11.28□□□□□ -0.6
PPP4R1-202ENST00000400555 LILRA5A6NI73 299 aa11.28□□□□□ -0.6
PPP4R1-202ENST00000400555 A6NIZ1 184 aa11.28□□□□□ -0.6
PPP4R1-202ENST00000400555 RFPL4AA6NLU0 287 aa11.28□□□□□ -0.6
PPP4R1-202ENST00000400555 RFPL4AL1F8VTS6 287 aa11.28□□□□□ -0.6
PPP4R1-202ENST00000400555 PIAS2O75928 621 aa11.28□□□□□ -0.6
PPP4R1-202ENST00000400555 QDPRP09417 244 aa11.28□□□□□ -0.6
PPP4R1-202ENST00000400555 AGTR1P30556 359 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms