RNA–Protein interactions for RNA: ENST00000397709.1

MAP1LC3A-203, Transcript of microtubule associated protein 1 light chain 3 alpha, humanhuman

APPRIS P1 TSL 3 BASIC

Gene MAP1LC3A, Length 698 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3A-203ENST00000397709 APOBEC3DQ96AK3 386 aaPredicted RBP16.8■□□□□ 0.28
MAP1LC3A-203ENST00000397709 RADILQ96JH8 1075 aa16.8■□□□□ 0.28
MAP1LC3A-203ENST00000397709 HS3ST6Q96QI5 342 aa16.8■□□□□ 0.28
MAP1LC3A-203ENST00000397709 OR5M11Q96RB7 305 aa16.8■□□□□ 0.28
MAP1LC3A-203ENST00000397709 MOB1AQ9H8S9 216 aa16.8■□□□□ 0.28
MAP1LC3A-203ENST00000397709 ACOT13Q9NPJ3 140 aa16.8■□□□□ 0.28
MAP1LC3A-203ENST00000397709 G6PC2Q9NQR9 355 aa16.8■□□□□ 0.28
MAP1LC3A-203ENST00000397709 BABAM2Q9NXR7 383 aa16.8■□□□□ 0.28
MAP1LC3A-203ENST00000397709 RNF115Q9Y4L5 304 aa16.8■□□□□ 0.28
MAP1LC3A-203ENST00000397709 FASNP49327 2511 aaKnown RBP16.79■□□□□ 0.28
MAP1LC3A-203ENST00000397709 A0A087WXM4 84 aa16.79■□□□□ 0.28
MAP1LC3A-203ENST00000397709 C5orf63A6NC05 138 aa16.79■□□□□ 0.28
MAP1LC3A-203ENST00000397709 A6NNC1 897 aa16.79■□□□□ 0.28
MAP1LC3A-203ENST00000397709 SHISA9B4DS77 424 aa16.79■□□□□ 0.28
MAP1LC3A-203ENST00000397709 E9PI62 339 aa16.79■□□□□ 0.28
MAP1LC3A-203ENST00000397709 LOC110117498-PIK3R3F6TDL0 507 aa16.79■□□□□ 0.28
MAP1LC3A-203ENST00000397709 LALBAP00709 142 aa16.79■□□□□ 0.28
MAP1LC3A-203ENST00000397709 NGFP01138 241 aa16.79■□□□□ 0.28
MAP1LC3A-203ENST00000397709 LCATP04180 440 aa16.79■□□□□ 0.28
MAP1LC3A-203ENST00000397709 FAM157BP0CG42 384 aa16.79■□□□□ 0.28
MAP1LC3A-203ENST00000397709 COX6B1P14854 86 aa16.79■□□□□ 0.28
MAP1LC3A-203ENST00000397709 TGM4P49221 684 aa16.79■□□□□ 0.28
MAP1LC3A-203ENST00000397709 GBX2P52951 348 aaPredicted RBP16.79■□□□□ 0.28
MAP1LC3A-203ENST00000397709 UCP2P55851 309 aa16.79■□□□□ 0.28
MAP1LC3A-203ENST00000397709 NKX6-1P78426 367 aaPredicted RBP16.79■□□□□ 0.28
MAP1LC3A-203ENST00000397709 EMX1Q04741 257 aaPredicted RBP16.79■□□□□ 0.28
MAP1LC3A-203ENST00000397709 SNAI3Q3KNW1 292 aa16.79■□□□□ 0.28
MAP1LC3A-203ENST00000397709 ADAM5Q6NVV9 412 aa16.79■□□□□ 0.28
MAP1LC3A-203ENST00000397709 FAM57BQ71RH2 274 aa16.79■□□□□ 0.28
MAP1LC3A-203ENST00000397709 CATSPERDQ86XM0 798 aa16.79■□□□□ 0.28
MAP1LC3A-203ENST00000397709 KLBQ86Z14 1044 aa16.79■□□□□ 0.28
MAP1LC3A-203ENST00000397709 NUP37Q8NFH4 326 aa16.79■□□□□ 0.28
MAP1LC3A-203ENST00000397709 ABHD4Q8TB40 342 aa16.79■□□□□ 0.28
MAP1LC3A-203ENST00000397709 BCL2L14Q9BZR8 327 aa16.79■□□□□ 0.28
MAP1LC3A-203ENST00000397709 PBOV1Q9GZY1 135 aa16.79■□□□□ 0.28
MAP1LC3A-203ENST00000397709 SP140LQ9H930 580 aa16.79■□□□□ 0.28
MAP1LC3A-203ENST00000397709 NUFIP1Q9UHK0 495 aaKnown RBP16.79■□□□□ 0.28
MAP1LC3A-203ENST00000397709 OR52A1Q9UKL2 312 aa16.79■□□□□ 0.28
MAP1LC3A-203ENST00000397709 DOPEY2Q9Y3R5 2298 aa16.79■□□□□ 0.28
MAP1LC3A-203ENST00000397709 TRIM64CA6NLI5 447 aa16.78■□□□□ 0.28
MAP1LC3A-203ENST00000397709 RAD52P43351 418 aa16.78■□□□□ 0.28
MAP1LC3A-203ENST00000397709 NANOS3P60323 173 aaKnown RBP16.78■□□□□ 0.28
MAP1LC3A-203ENST00000397709 ACSM1Q08AH1 577 aa16.78■□□□□ 0.28
MAP1LC3A-203ENST00000397709 SNTB2Q13425 540 aaKnown RBP16.78■□□□□ 0.28
MAP1LC3A-203ENST00000397709 SPHARQ15513 63 aa16.78■□□□□ 0.28
MAP1LC3A-203ENST00000397709 CCDC58Q4VC31 144 aa16.78■□□□□ 0.28
MAP1LC3A-203ENST00000397709 SLC22A25Q6T423 547 aa16.78■□□□□ 0.28
MAP1LC3A-203ENST00000397709 PRSS35Q8N3Z0 413 aa16.78■□□□□ 0.28
MAP1LC3A-203ENST00000397709 KBTBD8Q8NFY9 601 aa16.78■□□□□ 0.28
MAP1LC3A-203ENST00000397709 OR8B12Q8NGG6 310 aa16.78■□□□□ 0.28
MAP1LC3A-203ENST00000397709 OR52H1Q8NGJ2 320 aa16.78■□□□□ 0.28
MAP1LC3A-203ENST00000397709 OR2G2Q8NGZ5 317 aa16.78■□□□□ 0.28
MAP1LC3A-203ENST00000397709 PGAM5Q96HS1 289 aa16.78■□□□□ 0.28
MAP1LC3A-203ENST00000397709 OR51B6Q9H340 312 aa16.78■□□□□ 0.28
MAP1LC3A-203ENST00000397709 BRD7Q9NPI1 651 aa16.78■□□□□ 0.28
MAP1LC3A-203ENST00000397709 TRIM36Q9NQ86 728 aa16.78■□□□□ 0.28
MAP1LC3A-203ENST00000397709 ZNF319Q9P2F9 582 aa16.78■□□□□ 0.28
MAP1LC3A-203ENST00000397709 SPEF1Q9Y4P9 236 aa16.78■□□□□ 0.28
MAP1LC3A-203ENST00000397709 UTP20O75691 2785 aaKnown RBP16.77■□□□□ 0.28
MAP1LC3A-203ENST00000397709 FAM221AA4D161 298 aa16.77■□□□□ 0.28
MAP1LC3A-203ENST00000397709 PLAUP00749 431 aa16.77■□□□□ 0.28
MAP1LC3A-203ENST00000397709 LCKP06239 509 aa16.77■□□□□ 0.28
MAP1LC3A-203ENST00000397709 SMIM18P0DKX4 95 aa16.77■□□□□ 0.28
MAP1LC3A-203ENST00000397709 CCR9P51686 369 aa16.77■□□□□ 0.28
MAP1LC3A-203ENST00000397709 GTF2A1P52655 376 aaPredicted RBP16.77■□□□□ 0.28
MAP1LC3A-203ENST00000397709 BDH1Q02338 343 aa16.77■□□□□ 0.28
MAP1LC3A-203ENST00000397709 ALKBH1Q13686 389 aaKnown RBP16.77■□□□□ 0.28
MAP1LC3A-203ENST00000397709 MED22Q15528 200 aa16.77■□□□□ 0.28
MAP1LC3A-203ENST00000397709 WDR38Q5JTN6 314 aa16.77■□□□□ 0.28
MAP1LC3A-203ENST00000397709 BCL2L15Q5TBC7 163 aa16.77■□□□□ 0.28
MAP1LC3A-203ENST00000397709 UBE2UQ5VVX9 321 aa16.77■□□□□ 0.28
MAP1LC3A-203ENST00000397709 XAF1Q6GPH4 301 aa16.77■□□□□ 0.28
MAP1LC3A-203ENST00000397709 UNQ6126/PRO20091Q6UXV3 157 aa16.77■□□□□ 0.28
MAP1LC3A-203ENST00000397709 ZNF367Q7RTV3 350 aa16.77■□□□□ 0.28
MAP1LC3A-203ENST00000397709 C1orf174Q8IYL3 243 aa16.77■□□□□ 0.28
MAP1LC3A-203ENST00000397709 RPS4Y2Q8TD47 263 aa16.77■□□□□ 0.28
MAP1LC3A-203ENST00000397709 OR10A2Q9H208 303 aa16.77■□□□□ 0.28
MAP1LC3A-203ENST00000397709 POFUT1Q9H488 388 aa16.77■□□□□ 0.28
MAP1LC3A-203ENST00000397709 PLEKHB1Q9UF11 243 aaPredicted RBP16.77■□□□□ 0.28
MAP1LC3A-203ENST00000397709 ST6GALNAC2Q9UJ37 374 aa16.77■□□□□ 0.28
MAP1LC3A-203ENST00000397709 STARD10Q9Y365 291 aa16.77■□□□□ 0.28
MAP1LC3A-203ENST00000397709 N6AMT1Q9Y5N5 214 aa16.77■□□□□ 0.28
MAP1LC3A-203ENST00000397709 MAGEA13PA6NCF6 341 aa16.76■□□□□ 0.27
MAP1LC3A-203ENST00000397709 GPRIN2O60269 458 aa16.76■□□□□ 0.27
MAP1LC3A-203ENST00000397709 TUBG1P23258 451 aa16.76■□□□□ 0.27
MAP1LC3A-203ENST00000397709 COL8A1P27658 744 aa16.76■□□□□ 0.27
MAP1LC3A-203ENST00000397709 GLRXP35754 106 aa16.76■□□□□ 0.27
MAP1LC3A-203ENST00000397709 KIR3DL2P43630 455 aa16.76■□□□□ 0.27
MAP1LC3A-203ENST00000397709 TAS2R43P59537 309 aa16.76■□□□□ 0.27
MAP1LC3A-203ENST00000397709 PPP1CBP62140 327 aa16.76■□□□□ 0.27
MAP1LC3A-203ENST00000397709 CDK5R1Q15078 307 aa16.76■□□□□ 0.27
MAP1LC3A-203ENST00000397709 GLYATL3Q5SZD4 288 aa16.76■□□□□ 0.27
MAP1LC3A-203ENST00000397709 ZNF544Q6NX49 715 aa16.76■□□□□ 0.27
MAP1LC3A-203ENST00000397709 RPL22L1Q6P5R6 122 aaKnown RBP16.76■□□□□ 0.27
MAP1LC3A-203ENST00000397709 ZNF704Q6ZNC4 412 aaPredicted RBP16.76■□□□□ 0.27
MAP1LC3A-203ENST00000397709 ELMOD2Q8IZ81 293 aa16.76■□□□□ 0.27
MAP1LC3A-203ENST00000397709 OR5L1Q8NGL2 311 aa16.76■□□□□ 0.27
MAP1LC3A-203ENST00000397709 OR1J1Q8NGS3 322 aa16.76■□□□□ 0.27
MAP1LC3A-203ENST00000397709 PPP1R14AQ96A00 147 aa16.76■□□□□ 0.27
MAP1LC3A-203ENST00000397709 COG8Q96MW5 612 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms