RNA–Protein interactions for RNA: ENST00000396342.6

DDR1-229, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 3

Gene DDR1, Length 675 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-229ENST00000396342 FAM107BQ9H098 131 aa13.74□□□□□ -0.21
DDR1-229ENST00000396342 GORASP2Q9H8Y8 452 aa13.74□□□□□ -0.21
DDR1-229ENST00000396342 SP140LQ9H930 580 aa13.74□□□□□ -0.21
DDR1-229ENST00000396342 WDR76Q9H967 626 aa13.74□□□□□ -0.21
DDR1-229ENST00000396342 TMEM165Q9HC07 324 aa13.74□□□□□ -0.21
DDR1-229ENST00000396342 ESM1Q9NQ30 184 aa13.74□□□□□ -0.21
DDR1-229ENST00000396342 GMPR2Q9P2T1 348 aaKnown RBP13.74□□□□□ -0.21
DDR1-229ENST00000396342 ABCD2Q9UBJ2 740 aa13.74□□□□□ -0.21
DDR1-229ENST00000396342 LHFPL6Q9Y693 200 aa13.74□□□□□ -0.21
DDR1-229ENST00000396342 IGHV2-70DA0A0C4DH43 119 aa13.73□□□□□ -0.21
DDR1-229ENST00000396342 IGHV3-64DA0A0J9YX35 117 aa13.73□□□□□ -0.21
DDR1-229ENST00000396342 CLDN34H7C241 214 aa13.73□□□□□ -0.21
DDR1-229ENST00000396342 PHYHO14832 338 aa13.73□□□□□ -0.21
DDR1-229ENST00000396342 NDUFA2O43678 99 aa13.73□□□□□ -0.21
DDR1-229ENST00000396342 DIRAS1O95057 198 aa13.73□□□□□ -0.21
DDR1-229ENST00000396342 LIPFP07098 398 aa13.73□□□□□ -0.21
DDR1-229ENST00000396342 RNASE1P07998 156 aaKnown RBP13.73□□□□□ -0.21
DDR1-229ENST00000396342 HIST1H1CP16403 213 aaKnown RBP13.73□□□□□ -0.21
DDR1-229ENST00000396342 ZNF26P17031 533 aaPredicted RBP13.73□□□□□ -0.21
DDR1-229ENST00000396342 SEC61A1P61619 476 aaKnown RBP13.73□□□□□ -0.21
DDR1-229ENST00000396342 PAX8Q06710 450 aa13.73□□□□□ -0.21
DDR1-229ENST00000396342 TRAP1Q12931 704 aaKnown RBP13.73□□□□□ -0.21
DDR1-229ENST00000396342 OTPQ5XKR4 325 aa13.73□□□□□ -0.21
DDR1-229ENST00000396342 OR6V1Q8N148 313 aa13.73□□□□□ -0.21
DDR1-229ENST00000396342 SLC26A10Q8NG04 563 aa13.73□□□□□ -0.21
DDR1-229ENST00000396342 TMEM246Q9BRR3 403 aa13.73□□□□□ -0.21
DDR1-229ENST00000396342 OPA3Q9H6K4 179 aa13.73□□□□□ -0.21
DDR1-229ENST00000396342 C14orf119Q9NWQ9 140 aa13.73□□□□□ -0.21
DDR1-229ENST00000396342 RNF7Q9UBF6 113 aa13.73□□□□□ -0.21
DDR1-229ENST00000396342 IGLV1-36A0A0B4J1U3 117 aa13.72□□□□□ -0.21
DDR1-229ENST00000396342 KIR2DS1A0A191URI9 304 aa13.72□□□□□ -0.21
DDR1-229ENST00000396342 A0A1B0GUS0 222 aa13.72□□□□□ -0.21
DDR1-229ENST00000396342 M0R135 149 aa13.72□□□□□ -0.21
DDR1-229ENST00000396342 GMDSO60547 372 aa13.72□□□□□ -0.21
DDR1-229ENST00000396342 KRT36O76013 467 aa13.72□□□□□ -0.21
DDR1-229ENST00000396342 GPANK1O95872 356 aa13.72□□□□□ -0.21
DDR1-229ENST00000396342 EGR1P18146 543 aa13.72□□□□□ -0.21
DDR1-229ENST00000396342 FUT4P22083 530 aa13.72□□□□□ -0.21
DDR1-229ENST00000396342 CD80P33681 288 aa13.72□□□□□ -0.21
DDR1-229ENST00000396342 GRK5P34947 590 aa13.72□□□□□ -0.21
DDR1-229ENST00000396342 ERFP50548 548 aa13.72□□□□□ -0.21
DDR1-229ENST00000396342 MNAT1P51948 309 aa13.72□□□□□ -0.21
DDR1-229ENST00000396342 HIST1H3AP68431 136 aa13.72□□□□□ -0.21
DDR1-229ENST00000396342 SEC23BQ15437 767 aa13.72□□□□□ -0.21
DDR1-229ENST00000396342 OR8B8Q15620 311 aa13.72□□□□□ -0.21
DDR1-229ENST00000396342 ZNF404Q494X3 552 aa13.72□□□□□ -0.21
DDR1-229ENST00000396342 HIST2H3PS2Q5TEC6 136 aa13.72□□□□□ -0.21
DDR1-229ENST00000396342 SLC18B1Q6NT16 456 aa13.72□□□□□ -0.21
DDR1-229ENST00000396342 C8orf82Q6P1X6 216 aaPredicted RBP13.72□□□□□ -0.21
DDR1-229ENST00000396342 HIST2H3AQ71DI3 136 aa13.72□□□□□ -0.21
DDR1-229ENST00000396342 TSEN54Q7Z6J9 526 aaKnown RBP13.72□□□□□ -0.21
DDR1-229ENST00000396342 RNF148Q8N7C7 305 aa13.72□□□□□ -0.21
DDR1-229ENST00000396342 BOLLQ8N9W6 283 aaKnown RBP13.72□□□□□ -0.21
DDR1-229ENST00000396342 ZNF799Q96GE5 643 aa13.72□□□□□ -0.21
DDR1-229ENST00000396342 C7orf34Q96L11 122 aa13.72□□□□□ -0.21
DDR1-229ENST00000396342 COPS4Q9BT78 406 aa13.72□□□□□ -0.21
DDR1-229ENST00000396342 UFSP2Q9NUQ7 469 aa13.72□□□□□ -0.21
DDR1-229ENST00000396342 SVEP1Q4LDE5 3571 aa13.72□□□□□ -0.21
DDR1-229ENST00000396342 IGHV3OR16-10A0A075B7F0 116 aa13.71□□□□□ -0.21
DDR1-229ENST00000396342 TRAV38-1A0A0B4J264 116 aa13.71□□□□□ -0.21
DDR1-229ENST00000396342 TRAV40A0A0B4J280 105 aa13.71□□□□□ -0.21
DDR1-229ENST00000396342 A6NLC8 198 aa13.71□□□□□ -0.21
DDR1-229ENST00000396342 H0YL77 283 aa13.71□□□□□ -0.21
DDR1-229ENST00000396342 HLA-DPB1P04440 258 aa13.71□□□□□ -0.21
DDR1-229ENST00000396342 ACSM4P0C7M7 580 aa13.71□□□□□ -0.21
DDR1-229ENST00000396342 GATA4P43694 442 aa13.71□□□□□ -0.21
DDR1-229ENST00000396342 SLC15A1P46059 708 aa13.71□□□□□ -0.21
DDR1-229ENST00000396342 KHDRBS1Q07666 443 aaKnown RBP eCLIP13.71□□□□□ -0.21
DDR1-229ENST00000396342 TSPAN31Q12999 210 aa13.71□□□□□ -0.21
DDR1-229ENST00000396342 GK2Q14410 553 aaPredicted RBP13.71□□□□□ -0.21
DDR1-229ENST00000396342 ZNF362Q5T0B9 420 aaPredicted RBP13.71□□□□□ -0.21
DDR1-229ENST00000396342 SLC35F1Q5T1Q4 408 aa13.71□□□□□ -0.21
DDR1-229ENST00000396342 C16orf87Q6PH81 154 aa13.71□□□□□ -0.21
DDR1-229ENST00000396342 C16orf89Q6UX73 402 aa13.71□□□□□ -0.21
DDR1-229ENST00000396342 C17orf107Q6ZR85 190 aa13.71□□□□□ -0.21
DDR1-229ENST00000396342 SPATC1Q76KD6 591 aa13.71□□□□□ -0.21
DDR1-229ENST00000396342 PNLDC1Q8NA58 520 aaKnown RBP13.71□□□□□ -0.21
DDR1-229ENST00000396342 PLPP7Q8NBV4 271 aa13.71□□□□□ -0.21
DDR1-229ENST00000396342 UPRTQ96BW1 309 aa13.71□□□□□ -0.21
DDR1-229ENST00000396342 DHRS1Q96LJ7 313 aa13.71□□□□□ -0.21
DDR1-229ENST00000396342 ZNF696Q9H7X3 374 aa13.71□□□□□ -0.21
DDR1-229ENST00000396342 UNKLQ9H9P5 680 aaKnown RBP13.71□□□□□ -0.21
DDR1-229ENST00000396342 CYB5R1Q9UHQ9 305 aa13.71□□□□□ -0.21
DDR1-229ENST00000396342 hCG_1807616A0A1W2PRN6 198 aa13.7□□□□□ -0.22
DDR1-229ENST00000396342 IFNGP01579 166 aa13.7□□□□□ -0.22
DDR1-229ENST00000396342 APOC1P02654 83 aa13.7□□□□□ -0.22
DDR1-229ENST00000396342 CA6P23280 308 aa13.7□□□□□ -0.22
DDR1-229ENST00000396342 CD200P41217 278 aa13.7□□□□□ -0.22
DDR1-229ENST00000396342 BLVRAP53004 296 aa13.7□□□□□ -0.22
DDR1-229ENST00000396342 SNCBQ16143 134 aa13.7□□□□□ -0.22
DDR1-229ENST00000396342 SPATS1Q496A3 300 aa13.7□□□□□ -0.22
DDR1-229ENST00000396342 KLF17Q5JT82 389 aaPredicted RBP13.7□□□□□ -0.22
DDR1-229ENST00000396342 CLEC12AQ5QGZ9 265 aa13.7□□□□□ -0.22
DDR1-229ENST00000396342 METTL11BQ5VVY1 283 aa13.7□□□□□ -0.22
DDR1-229ENST00000396342 DRAM2Q6UX65 266 aa13.7□□□□□ -0.22
DDR1-229ENST00000396342 COLCA1Q6ZS62 124 aa13.7□□□□□ -0.22
DDR1-229ENST00000396342 C9orf139Q6ZV77 190 aa13.7□□□□□ -0.22
DDR1-229ENST00000396342 ZBTB46Q86UZ6 589 aa13.7□□□□□ -0.22
DDR1-229ENST00000396342 BCL6BQ8N143 479 aaPredicted RBP13.7□□□□□ -0.22
DDR1-229ENST00000396342 FAM86B1Q8N7N1 296 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 75.6 ms