RNA–Protein interactions for RNA: ENST00000394597.6

RFFL-202, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFFL, Length 4,227 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-202ENST00000394597 ZNF101Q8IZC7 436 aa5.15□□□□□ -1.59
RFFL-202ENST00000394597 MUC20Q8N307 709 aaPredicted RBP5.15□□□□□ -1.59
RFFL-202ENST00000394597 OR6N2Q8NGY6 317 aa5.15□□□□□ -1.59
RFFL-202ENST00000394597 ZDHHC19Q8WVZ1 309 aaPredicted RBP5.15□□□□□ -1.59
RFFL-202ENST00000394597 PRRT1Q99946 306 aa5.15□□□□□ -1.59
RFFL-202ENST00000394597 SLC25A21Q9BQT8 299 aaPredicted RBP5.15□□□□□ -1.59
RFFL-202ENST00000394597 TMPRSS13Q9BYE2 586 aa5.15□□□□□ -1.59
RFFL-202ENST00000394597 TAF9BQ9HBM6 251 aa5.15□□□□□ -1.59
RFFL-202ENST00000394597 NOX4Q9NPH5 578 aa5.15□□□□□ -1.59
RFFL-202ENST00000394597 FSCN3Q9NQT6 498 aa5.15□□□□□ -1.59
RFFL-202ENST00000394597 MED17Q9NVC6 651 aa5.15□□□□□ -1.59
RFFL-202ENST00000394597 LRFN1Q9P244 771 aa5.15□□□□□ -1.59
RFFL-202ENST00000394597 CABIN1Q9Y6J0 2220 aa5.14□□□□□ -1.59
RFFL-202ENST00000394597 CDHR4A6H8M9 788 aa5.14□□□□□ -1.59
RFFL-202ENST00000394597 SOX15O60248 233 aa5.14□□□□□ -1.59
RFFL-202ENST00000394597 ICOSLGO75144 302 aa5.14□□□□□ -1.59
RFFL-202ENST00000394597 EPXP11678 715 aa5.14□□□□□ -1.59
RFFL-202ENST00000394597 NDUFB7P17568 137 aa5.14□□□□□ -1.59
RFFL-202ENST00000394597 TACR3P29371 465 aa5.14□□□□□ -1.59
RFFL-202ENST00000394597 CLRN1P58418 232 aa5.14□□□□□ -1.59
RFFL-202ENST00000394597 IL11RAQ14626 422 aa5.14□□□□□ -1.59
RFFL-202ENST00000394597 ZNF239Q16600 458 aaKnown RBP5.14□□□□□ -1.59
RFFL-202ENST00000394597 PRTGQ2VWP7 1150 aa5.14□□□□□ -1.59
RFFL-202ENST00000394597 GGNBP1Q5YKI7 109 aa5.14□□□□□ -1.59
RFFL-202ENST00000394597 SMIM15Q7Z3B0 74 aa5.14□□□□□ -1.59
RFFL-202ENST00000394597 MARCH3Q86UD3 253 aa5.14□□□□□ -1.59
RFFL-202ENST00000394597 D2HGDHQ8N465 521 aa5.14□□□□□ -1.59
RFFL-202ENST00000394597 OR13C5Q8NGS8 318 aa5.14□□□□□ -1.59
RFFL-202ENST00000394597 TNFRSF13CQ96RJ3 184 aa5.14□□□□□ -1.59
RFFL-202ENST00000394597 SIRT7Q9NRC8 400 aa5.14□□□□□ -1.59
RFFL-202ENST00000394597 INPP5EQ9NRR6 644 aa5.14□□□□□ -1.59
RFFL-202ENST00000394597 PILRAQ9UKJ1 303 aa5.14□□□□□ -1.59
RFFL-202ENST00000394597 C14orf166Q9Y224 244 aaKnown RBP5.14□□□□□ -1.59
RFFL-202ENST00000394597 ERCC1P07992 297 aaPredicted RBP5.14□□□□□ -1.59
RFFL-202ENST00000394597 OR4E1P0C645 316 aa5.14□□□□□ -1.59
RFFL-202ENST00000394597 SFTPCP11686 197 aa5.14□□□□□ -1.59
RFFL-202ENST00000394597 ZNF28P17035 718 aa5.14□□□□□ -1.59
RFFL-202ENST00000394597 CDK2P24941 298 aa5.14□□□□□ -1.59
RFFL-202ENST00000394597 GZMMP51124 257 aa5.14□□□□□ -1.59
RFFL-202ENST00000394597 POLR2HP52434 150 aaKnown RBP5.14□□□□□ -1.59
RFFL-202ENST00000394597 F2RL1P55085 397 aa5.14□□□□□ -1.59
RFFL-202ENST00000394597 PCBP3P57721 371 aaKnown RBP5.14□□□□□ -1.59
RFFL-202ENST00000394597 TAS2R20P59543 309 aa5.14□□□□□ -1.59
RFFL-202ENST00000394597 TLE3Q04726 772 aa5.14□□□□□ -1.59
RFFL-202ENST00000394597 GLO1Q04760 184 aa5.14□□□□□ -1.59
RFFL-202ENST00000394597 FAM189A2Q15884 450 aa5.14□□□□□ -1.59
RFFL-202ENST00000394597 KCTD18Q6PI47 426 aaPredicted RBP5.14□□□□□ -1.59
RFFL-202ENST00000394597 TMEM91Q6ZNR0 172 aa5.14□□□□□ -1.59
RFFL-202ENST00000394597 OR13C2Q8NGS9 318 aa5.14□□□□□ -1.59
RFFL-202ENST00000394597 OR2I1PQ8NGU4 316 aa5.14□□□□□ -1.59
RFFL-202ENST00000394597 OR5AK2Q8NH90 309 aa5.14□□□□□ -1.59
RFFL-202ENST00000394597 DERL3Q96Q80 235 aa5.14□□□□□ -1.59
RFFL-202ENST00000394597 KCNJ15Q99712 375 aa5.14□□□□□ -1.59
RFFL-202ENST00000394597 NIPSNAP3BQ9BS92 247 aa5.14□□□□□ -1.59
RFFL-202ENST00000394597 ALX4Q9H161 411 aaPredicted RBP5.14□□□□□ -1.59
RFFL-202ENST00000394597 ISG20L2Q9H9L3 353 aaKnown RBP5.14□□□□□ -1.59
RFFL-202ENST00000394597 SLC25A19Q9HC21 320 aa5.14□□□□□ -1.59
RFFL-202ENST00000394597 PLSCR2Q9NRY7 297 aa5.14□□□□□ -1.59
RFFL-202ENST00000394597 RXFP3Q9NSD7 469 aa5.14□□□□□ -1.59
RFFL-202ENST00000394597 PLXNA4Q9HCM2 1894 aa5.14□□□□□ -1.59
RFFL-202ENST00000394597 MTCL1Q9Y4B5 1905 aaKnown RBP5.14□□□□□ -1.59
RFFL-202ENST00000394597 C7orf77A4D0Y5 90 aa5.14□□□□□ -1.59
RFFL-202ENST00000394597 ARRDC5A6NEK1 342 aa5.14□□□□□ -1.59
RFFL-202ENST00000394597 GJE1A6NN92 205 aa5.14□□□□□ -1.59
RFFL-202ENST00000394597 NPIPA2E9PIF3 369 aa5.14□□□□□ -1.59
RFFL-202ENST00000394597 NPIPA3F8WFD2 350 aa5.14□□□□□ -1.59
RFFL-202ENST00000394597 H7C417 338 aa5.14□□□□□ -1.59
RFFL-202ENST00000394597 CYR61O00622 381 aa5.14□□□□□ -1.59
RFFL-202ENST00000394597 CLN5O75503 358 aa5.14□□□□□ -1.59
RFFL-202ENST00000394597 PLGP00747 810 aaPredicted RBP5.14□□□□□ -1.59
RFFL-202ENST00000394597 HOXB5P09067 269 aa5.14□□□□□ -1.59
RFFL-202ENST00000394597 PNLIPP16233 465 aa5.14□□□□□ -1.59
RFFL-202ENST00000394597 ATF1P18846 271 aa5.14□□□□□ -1.59
RFFL-202ENST00000394597 PSMB6P28072 239 aa5.14□□□□□ -1.59
RFFL-202ENST00000394597 SSR4P51571 173 aa5.14□□□□□ -1.59
RFFL-202ENST00000394597 P2RY4P51582 365 aa5.14□□□□□ -1.59
RFFL-202ENST00000394597 LIMK1P53667 647 aa5.14□□□□□ -1.59
RFFL-202ENST00000394597 AWAT1Q58HT5 328 aa5.14□□□□□ -1.59
RFFL-202ENST00000394597 C12orf73Q69YU5 71 aa5.14□□□□□ -1.59
RFFL-202ENST00000394597 AWAT2Q6E213 333 aa5.14□□□□□ -1.59
RFFL-202ENST00000394597 FAM185AQ8N0U4 392 aa5.14□□□□□ -1.59
RFFL-202ENST00000394597 OR4C16Q8NGL9 310 aa5.14□□□□□ -1.59
RFFL-202ENST00000394597 OR14L1PQ8NHC6 308 aa5.14□□□□□ -1.59
RFFL-202ENST00000394597 FRZBQ92765 325 aa5.14□□□□□ -1.59
RFFL-202ENST00000394597 THOC3Q96J01 351 aaKnown RBP5.14□□□□□ -1.59
RFFL-202ENST00000394597 NXF5Q9H1B4 397 aaKnown RBP5.14□□□□□ -1.59
RFFL-202ENST00000394597 EXOSC3Q9NQT5 275 aaKnown RBP5.14□□□□□ -1.59
RFFL-202ENST00000394597 METTL1Q9UBP6 276 aaKnown RBP5.14□□□□□ -1.59
RFFL-202ENST00000394597 CES1P1Q9UKY3 287 aa5.14□□□□□ -1.59
RFFL-202ENST00000394597 LOXL2Q9Y4K0 774 aa5.14□□□□□ -1.59
RFFL-202ENST00000394597 AHCTF1Q8WYP5 2266 aa5.13□□□□□ -1.59
RFFL-202ENST00000394597 A6NCN8 305 aa5.13□□□□□ -1.59
RFFL-202ENST00000394597 FRG2CA6NGY1 282 aa5.13□□□□□ -1.59
RFFL-202ENST00000394597 ZNF878C9JN71 531 aa5.13□□□□□ -1.59
RFFL-202ENST00000394597 H3BML4 177 aa5.13□□□□□ -1.59
RFFL-202ENST00000394597 NME2P1O60361 137 aa5.13□□□□□ -1.59
RFFL-202ENST00000394597 SYNGR4O95473 234 aa5.13□□□□□ -1.59
RFFL-202ENST00000394597 SRMP19623 302 aa5.13□□□□□ -1.59
RFFL-202ENST00000394597 GNG10P50151 68 aa5.13□□□□□ -1.59
RFFL-202ENST00000394597 PNLIPRP2P54317 469 aa5.13□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms