RNA–Protein interactions for RNA: ENST00000389629.8

RTF1-201, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTF1, Length 5,021 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-201ENST00000389629 C2orf50Q96LR7 162 aa12.87□□□□□ -0.35
RTF1-201ENST00000389629 EMC6Q9BV81 110 aa12.87□□□□□ -0.35
RTF1-201ENST00000389629 GDE1Q9NZC3 331 aa12.87□□□□□ -0.35
RTF1-201ENST00000389629 TRAV8-7A0A075B6U6 113 aa12.87□□□□□ -0.35
RTF1-201ENST00000389629 TMED7-TICAM2A0A0A6YYA0 188 aa12.87□□□□□ -0.35
RTF1-201ENST00000389629 NPIPA2E9PIF3 369 aa12.87□□□□□ -0.35
RTF1-201ENST00000389629 NPIPA3F8WFD2 350 aa12.87□□□□□ -0.35
RTF1-201ENST00000389629 CD63P08962 238 aa12.87□□□□□ -0.35
RTF1-201ENST00000389629 FGF2P09038 288 aa12.87□□□□□ -0.35
RTF1-201ENST00000389629 FABP4P15090 132 aa12.87□□□□□ -0.35
RTF1-201ENST00000389629 LAP3P28838 519 aa12.87□□□□□ -0.35
RTF1-201ENST00000389629 CDKN2AP42771 156 aaKnown RBP12.87□□□□□ -0.35
RTF1-201ENST00000389629 RABIFP47224 123 aa12.87□□□□□ -0.35
RTF1-201ENST00000389629 RAB32Q13637 225 aa12.87□□□□□ -0.35
RTF1-201ENST00000389629 RPL7L1Q6DKI1 246 aaKnown RBP12.87□□□□□ -0.35
RTF1-201ENST00000389629 WDR88Q6ZMY6 472 aa12.87□□□□□ -0.35
RTF1-201ENST00000389629 LDLRAD3Q86YD5 345 aa12.87□□□□□ -0.35
RTF1-201ENST00000389629 C19orf47Q8N9M1 422 aaKnown RBP12.87□□□□□ -0.35
RTF1-201ENST00000389629 ZFP62Q8NB50 900 aaPredicted RBP12.87□□□□□ -0.35
RTF1-201ENST00000389629 OR4C3Q8NH37 302 aa12.87□□□□□ -0.35
RTF1-201ENST00000389629 OR5B2Q96R09 309 aa12.87□□□□□ -0.35
RTF1-201ENST00000389629 HAO2Q9NYQ3 351 aa12.87□□□□□ -0.35
RTF1-201ENST00000389629 TMED7Q9Y3B3 224 aa12.87□□□□□ -0.35
RTF1-201ENST00000389629 MSTNO14793 375 aa12.87□□□□□ -0.35
RTF1-201ENST00000389629 H2AFB1P0C5Y9 115 aa12.87□□□□□ -0.35
RTF1-201ENST00000389629 CISD3P0C7P0 127 aa12.87□□□□□ -0.35
RTF1-201ENST00000389629 IKZF1Q13422 519 aa12.87□□□□□ -0.35
RTF1-201ENST00000389629 FAM109BQ6ICB4 259 aaPredicted RBP12.87□□□□□ -0.35
RTF1-201ENST00000389629 LILRA6Q6PI73 481 aa12.87□□□□□ -0.35
RTF1-201ENST00000389629 EXD3Q8N9H8 876 aa12.87□□□□□ -0.35
RTF1-201ENST00000389629 CCDC54Q8NEL0 328 aa12.87□□□□□ -0.35
RTF1-201ENST00000389629 BORCS8Q96FH0 119 aa12.87□□□□□ -0.35
RTF1-201ENST00000389629 TOE1Q96GM8 510 aaKnown RBP12.87□□□□□ -0.35
RTF1-201ENST00000389629 FLRT3Q9NZU0 649 aa12.87□□□□□ -0.35
RTF1-201ENST00000389629 ST6GALNAC2Q9UJ37 374 aa12.87□□□□□ -0.35
RTF1-201ENST00000389629 A0A087WUJ7 227 aa12.87□□□□□ -0.35
RTF1-201ENST00000389629 C2orf72A6NCS6 295 aa12.87□□□□□ -0.35
RTF1-201ENST00000389629 LCATP04180 440 aa12.87□□□□□ -0.35
RTF1-201ENST00000389629 ZNF728P0DKX0 622 aa12.87□□□□□ -0.35
RTF1-201ENST00000389629 ADIRFQ15847 76 aa12.87□□□□□ -0.35
RTF1-201ENST00000389629 TSTD1Q8NFU3 115 aa12.87□□□□□ -0.35
RTF1-201ENST00000389629 OR5AP2Q8NGF4 316 aa12.87□□□□□ -0.35
RTF1-201ENST00000389629 FAM174AQ8TBP5 190 aa12.87□□□□□ -0.35
RTF1-201ENST00000389629 MITD1Q8WV92 249 aa12.87□□□□□ -0.35
RTF1-201ENST00000389629 RGP1Q92546 391 aaPredicted RBP12.87□□□□□ -0.35
RTF1-201ENST00000389629 DDIT4LQ96D03 193 aa12.87□□□□□ -0.35
RTF1-201ENST00000389629 BMFQ96LC9 184 aa12.87□□□□□ -0.35
RTF1-201ENST00000389629 SLC25A31Q9H0C2 315 aa12.87□□□□□ -0.35
RTF1-201ENST00000389629 PTGES2Q9H7Z7 377 aa12.87□□□□□ -0.35
RTF1-201ENST00000389629 PLEK2Q9NYT0 353 aa12.87□□□□□ -0.35
RTF1-201ENST00000389629 MRPS2Q9Y399 296 aaKnown RBP12.87□□□□□ -0.35
RTF1-201ENST00000389629 RECKO95980 971 aa12.86□□□□□ -0.35
RTF1-201ENST00000389629 SERPINE2P07093 398 aa12.86□□□□□ -0.35
RTF1-201ENST00000389629 HEXBP07686 556 aa12.86□□□□□ -0.35
RTF1-201ENST00000389629 CHRM2P08172 466 aa12.86□□□□□ -0.35
RTF1-201ENST00000389629 EGR3Q06889 387 aa12.86□□□□□ -0.35
RTF1-201ENST00000389629 ARTNQ5T4W7 220 aa12.86□□□□□ -0.35
RTF1-201ENST00000389629 ZAR1Q86SH2 424 aa12.86□□□□□ -0.35
RTF1-201ENST00000389629 DNAJB12Q9NXW2 375 aaKnown RBP12.86□□□□□ -0.35
RTF1-201ENST00000389629 MBTPS2O43462 519 aa12.86□□□□□ -0.35
RTF1-201ENST00000389629 QDPRP09417 244 aa12.86□□□□□ -0.35
RTF1-201ENST00000389629 CT62P0C5K7 136 aa12.86□□□□□ -0.35
RTF1-201ENST00000389629 IGFBP4P22692 258 aa12.86□□□□□ -0.35
RTF1-201ENST00000389629 ASCL1P50553 236 aa12.86□□□□□ -0.35
RTF1-201ENST00000389629 RAB4BP61018 213 aa12.86□□□□□ -0.35
RTF1-201ENST00000389629 RPL27P61353 136 aaKnown RBP12.86□□□□□ -0.35
RTF1-201ENST00000389629 AWAT1Q58HT5 328 aa12.86□□□□□ -0.35
RTF1-201ENST00000389629 TMEM128Q5BJH2 165 aa12.86□□□□□ -0.35
RTF1-201ENST00000389629 FAM69BQ5VUD6 431 aa12.86□□□□□ -0.35
RTF1-201ENST00000389629 OR13C8Q8NGS7 320 aa12.86□□□□□ -0.35
RTF1-201ENST00000389629 OR51E1Q8TCB6 317 aa12.86□□□□□ -0.35
RTF1-201ENST00000389629 PIGTQ969N2 578 aa12.86□□□□□ -0.35
RTF1-201ENST00000389629 COX14Q96I36 57 aa12.86□□□□□ -0.35
RTF1-201ENST00000389629 TLNRD1Q9H1K6 362 aa12.86□□□□□ -0.35
RTF1-201ENST00000389629 ATG2BQ96BY7 2078 aa12.86□□□□□ -0.35
RTF1-201ENST00000389629 HPP00738 406 aa12.86□□□□□ -0.35
RTF1-201ENST00000389629 OR2A2Q6IF42 318 aa12.86□□□□□ -0.35
RTF1-201ENST00000389629 PRR18Q8N4B5 295 aa12.86□□□□□ -0.35
RTF1-201ENST00000389629 RSC1A1Q92681 617 aa12.86□□□□□ -0.35
RTF1-201ENST00000389629 RAB39BQ96DA2 213 aa12.86□□□□□ -0.35
RTF1-201ENST00000389629 NUDT9Q9BW91 350 aa12.86□□□□□ -0.35
RTF1-201ENST00000389629 ADPRHP54922 357 aa12.86□□□□□ -0.35
RTF1-201ENST00000389629 CHRDL2Q6WN34 429 aa12.86□□□□□ -0.35
RTF1-201ENST00000389629 OR51A4Q8NGJ6 313 aa12.86□□□□□ -0.35
RTF1-201ENST00000389629 SLC37A2Q8TED4 501 aa12.86□□□□□ -0.35
RTF1-201ENST00000389629 CPNE4Q96A23 557 aaPredicted RBP12.86□□□□□ -0.35
RTF1-201ENST00000389629 ASB16Q96NS5 453 aa12.86□□□□□ -0.35
RTF1-201ENST00000389629 ZNF2Q9BSG1 426 aaPredicted RBP12.86□□□□□ -0.35
RTF1-201ENST00000389629 MYLKQ15746 1914 aa12.86□□□□□ -0.35
RTF1-201ENST00000389629 CA3P07451 260 aa12.85□□□□□ -0.35
RTF1-201ENST00000389629 DBHP09172 617 aa12.85□□□□□ -0.35
RTF1-201ENST00000389629 NECAP1Q8NC96 275 aa12.85□□□□□ -0.35
RTF1-201ENST00000389629 LCORQ96JN0 433 aaPredicted RBP12.85□□□□□ -0.35
RTF1-201ENST00000389629 MAP3K3Q99759 626 aa12.85□□□□□ -0.35
RTF1-201ENST00000389629 AMDHD2Q9Y303 409 aa12.85□□□□□ -0.35
RTF1-201ENST00000389629 PSME4Q14997 1843 aa12.85□□□□□ -0.35
RTF1-201ENST00000389629 DVL1P1P54792 670 aaPredicted RBP12.85□□□□□ -0.35
RTF1-201ENST00000389629 IL10RAQ13651 578 aa12.85□□□□□ -0.35
RTF1-201ENST00000389629 TESK1Q15569 626 aa12.85□□□□□ -0.35
RTF1-201ENST00000389629 NR2C2APQ86WQ0 139 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms