RNA–Protein interactions for RNA: ENST00000380443.5

VPS16-201, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 1 (best)

Gene VPS16, Length 1,825 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-201ENST00000380443 SFRP4Q6FHJ7 346 aaPredicted RBP20.42■□□□□ 0.86
VPS16-201ENST00000380443 DOK3Q7L591 496 aa20.42■□□□□ 0.86
VPS16-201ENST00000380443 GCDHQ92947 438 aaPredicted RBP20.42■□□□□ 0.86
VPS16-201ENST00000380443 ZFP64Q9NPA5 681 aa20.42■□□□□ 0.86
VPS16-201ENST00000380443 MRPL15Q9P015 296 aaKnown RBP20.42■□□□□ 0.86
VPS16-201ENST00000380443 FBLN5Q9UBX5 448 aa20.42■□□□□ 0.86
VPS16-201ENST00000380443 A0A1B0GUH1 482 aa20.41■□□□□ 0.86
VPS16-201ENST00000380443 LRRC3CA6NJW4 275 aa20.41■□□□□ 0.86
VPS16-201ENST00000380443 BPNT1O95861 308 aa20.41■□□□□ 0.86
VPS16-201ENST00000380443 GNALP38405 381 aa20.41■□□□□ 0.86
VPS16-201ENST00000380443 CASRP41180 1078 aa20.41■□□□□ 0.86
VPS16-201ENST00000380443 ZNF121P58317 390 aaPredicted RBP20.41■□□□□ 0.86
VPS16-201ENST00000380443 FCN2Q15485 313 aa20.41■□□□□ 0.86
VPS16-201ENST00000380443 PIP4P1Q86T03 277 aa20.41■□□□□ 0.86
VPS16-201ENST00000380443 ZIC4Q8N9L1 334 aa20.41■□□□□ 0.86
VPS16-201ENST00000380443 OR1J2Q8NGS2 313 aa20.41■□□□□ 0.86
VPS16-201ENST00000380443 ZFAND1Q8TCF1 268 aa20.41■□□□□ 0.86
VPS16-201ENST00000380443 GPX8Q8TED1 209 aa20.41■□□□□ 0.86
VPS16-201ENST00000380443 GIMAP1Q8WWP7 306 aa20.41■□□□□ 0.86
VPS16-201ENST00000380443 HYLS1Q96M11 299 aa20.41■□□□□ 0.86
VPS16-201ENST00000380443 ZNF385AQ96PM9 386 aaKnown RBP20.41■□□□□ 0.86
VPS16-201ENST00000380443 ZNF416Q9BWM5 594 aa20.41■□□□□ 0.86
VPS16-201ENST00000380443 SLA2Q9H6Q3 261 aa20.41■□□□□ 0.86
VPS16-201ENST00000380443 CGGBP1Q9UFW8 167 aaPredicted RBP20.41■□□□□ 0.86
VPS16-201ENST00000380443 ING4Q9UNL4 249 aa20.41■□□□□ 0.86
VPS16-201ENST00000380443 SLC5A6Q9Y289 635 aa20.41■□□□□ 0.86
VPS16-201ENST00000380443 LOC101059948A0A1B0GTJ6 334 aa20.41■□□□□ 0.86
VPS16-201ENST00000380443 MASP2O00187 686 aa20.41■□□□□ 0.86
VPS16-201ENST00000380443 RER1O15258 196 aa20.41■□□□□ 0.86
VPS16-201ENST00000380443 IL5P05113 134 aa20.41■□□□□ 0.86
VPS16-201ENST00000380443 CX3CR1P49238 355 aa20.41■□□□□ 0.86
VPS16-201ENST00000380443 PCGF3Q3KNV8 242 aa20.41■□□□□ 0.86
VPS16-201ENST00000380443 PDSS1Q5T2R2 415 aa20.41■□□□□ 0.86
VPS16-201ENST00000380443 THOC3Q96J01 351 aaKnown RBP20.41■□□□□ 0.86
VPS16-201ENST00000380443 SFXN2Q96NB2 322 aa20.41■□□□□ 0.86
VPS16-201ENST00000380443 UCN2Q96RP3 112 aa20.41■□□□□ 0.86
VPS16-201ENST00000380443 NUDT16L1Q9BRJ7 211 aaKnown RBP20.41■□□□□ 0.86
VPS16-201ENST00000380443 FOXJ2Q9P0K8 574 aa20.41■□□□□ 0.86
VPS16-201ENST00000380443 RHBDD3Q9Y3P4 386 aa20.41■□□□□ 0.86
VPS16-201ENST00000380443 PMS2P1A4D2B8 440 aa20.4■□□□□ 0.86
VPS16-201ENST00000380443 SMAD9O15198 467 aaKnown RBP20.4■□□□□ 0.86
VPS16-201ENST00000380443 NDUFB6O95139 128 aa20.4■□□□□ 0.86
VPS16-201ENST00000380443 WDPCPO95876 746 aa20.4■□□□□ 0.86
VPS16-201ENST00000380443 AKAIN1P0CW23 69 aa20.4■□□□□ 0.86
VPS16-201ENST00000380443 ANXA3P12429 323 aa20.4■□□□□ 0.86
VPS16-201ENST00000380443 GSK3AP49840 483 aa20.4■□□□□ 0.86
VPS16-201ENST00000380443 MRPS34P82930 218 aaKnown RBP20.4■□□□□ 0.86
VPS16-201ENST00000380443 OC90Q02509 493 aaPredicted RBP20.4■□□□□ 0.86
VPS16-201ENST00000380443 BCL2A1Q16548 175 aa20.4■□□□□ 0.86
VPS16-201ENST00000380443 YRDCQ86U90 279 aaKnown RBP20.4■□□□□ 0.86
VPS16-201ENST00000380443 ZNF283Q8N7M2 679 aa20.4■□□□□ 0.86
VPS16-201ENST00000380443 OR2V1Q8NHB1 315 aa20.4■□□□□ 0.86
VPS16-201ENST00000380443 OR51E1Q8TCB6 317 aa20.4■□□□□ 0.86
VPS16-201ENST00000380443 SRXN1Q9BYN0 137 aa20.4■□□□□ 0.86
VPS16-201ENST00000380443 RANBP3Q9H6Z4 567 aaPredicted RBP20.4■□□□□ 0.86
VPS16-201ENST00000380443 NOX3Q9HBY0 568 aa20.4■□□□□ 0.86
VPS16-201ENST00000380443 PAQR5Q9NXK6 330 aaPredicted RBP20.4■□□□□ 0.86
VPS16-201ENST00000380443 ALDOBP05062 364 aa20.39■□□□□ 0.86
VPS16-201ENST00000380443 LPLP06858 475 aa20.39■□□□□ 0.86
VPS16-201ENST00000380443 CEACAM1P13688 526 aa20.39■□□□□ 0.86
VPS16-201ENST00000380443 PRKXP51817 358 aa20.39■□□□□ 0.86
VPS16-201ENST00000380443 FAM189A2Q15884 450 aa20.39■□□□□ 0.86
VPS16-201ENST00000380443 FAM27BQ5VT28 67 aa20.39■□□□□ 0.86
VPS16-201ENST00000380443 GGNQ86UU5 652 aa20.39■□□□□ 0.86
VPS16-201ENST00000380443 OR8B12Q8NGG6 310 aa20.39■□□□□ 0.86
VPS16-201ENST00000380443 NABP1Q96AH0 204 aa20.39■□□□□ 0.86
VPS16-201ENST00000380443 ADAT3Q96EY9 351 aaPredicted RBP20.39■□□□□ 0.86
VPS16-201ENST00000380443 ADGRG7Q96K78 797 aa20.39■□□□□ 0.86
VPS16-201ENST00000380443 FAM173AQ9BQD7 235 aa20.39■□□□□ 0.86
VPS16-201ENST00000380443 ULBP2Q9BZM5 246 aa20.39■□□□□ 0.86
VPS16-201ENST00000380443 FLVCR1Q9Y5Y0 555 aa20.39■□□□□ 0.86
VPS16-201ENST00000380443 LMX1BO60663 402 aa20.39■□□□□ 0.85
VPS16-201ENST00000380443 ICMTO60725 284 aa20.39■□□□□ 0.85
VPS16-201ENST00000380443 SULT1A3P0DMM9 295 aa20.39■□□□□ 0.85
VPS16-201ENST00000380443 SULT1A4P0DMN0 295 aa20.39■□□□□ 0.85
VPS16-201ENST00000380443 ENDOGQ14249 297 aaKnown RBP20.39■□□□□ 0.85
VPS16-201ENST00000380443 ABHD17BQ5VST6 288 aa20.39■□□□□ 0.85
VPS16-201ENST00000380443 ASCC1Q8N9N2 400 aaKnown RBP20.39■□□□□ 0.85
VPS16-201ENST00000380443 DEFB124Q8NES8 71 aa20.39■□□□□ 0.85
VPS16-201ENST00000380443 ITFG2Q969R8 447 aa20.39■□□□□ 0.85
VPS16-201ENST00000380443 GPN1Q9HCN4 374 aaPredicted RBP20.39■□□□□ 0.85
VPS16-201ENST00000380443 LRFN1Q9P244 771 aa20.39■□□□□ 0.85
VPS16-201ENST00000380443 IGHV3-15A0A0B4J1V0 119 aa20.38■□□□□ 0.85
VPS16-201ENST00000380443 A0A0G2JMM0 328 aa20.38■□□□□ 0.85
VPS16-201ENST00000380443 A0A0U1RQV5 110 aa20.38■□□□□ 0.85
VPS16-201ENST00000380443 A0A1W2PPB8 328 aa20.38■□□□□ 0.85
VPS16-201ENST00000380443 A0A1W2PRS3 328 aa20.38■□□□□ 0.85
VPS16-201ENST00000380443 KIR3DP1A8MWS1 328 aa20.38■□□□□ 0.85
VPS16-201ENST00000380443 DOK2O60496 412 aa20.38■□□□□ 0.85
VPS16-201ENST00000380443 KDM4BO94953 1096 aa20.38■□□□□ 0.85
VPS16-201ENST00000380443 RBMS2Q15434 407 aaKnown RBP20.38■□□□□ 0.85
VPS16-201ENST00000380443 ST3GAL2Q16842 350 aa20.38■□□□□ 0.85
VPS16-201ENST00000380443 TMEM255AQ5JRV8 349 aa20.38■□□□□ 0.85
VPS16-201ENST00000380443 PHYHD1Q5SRE7 291 aa20.38■□□□□ 0.85
VPS16-201ENST00000380443 BIVMQ86UB2 503 aa20.38■□□□□ 0.85
VPS16-201ENST00000380443 TMEM229BQ8NBD8 167 aa20.38■□□□□ 0.85
VPS16-201ENST00000380443 GON7Q9BXV9 100 aa20.38■□□□□ 0.85
VPS16-201ENST00000380443 SNRPGP15A8MWD9 76 aa20.37■□□□□ 0.85
VPS16-201ENST00000380443 PTHLHP12272 177 aa20.37■□□□□ 0.85
VPS16-201ENST00000380443 NOVA1P51513 510 aaKnown RBP20.37■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms