RNA–Protein interactions for RNA: ENST00000379826.4

SMAD9-202, Transcript of SMAD family member 9, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMAD9, Length 5,592 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-202ENST00000379826 S1PR5Q9H228 398 aa10.24□□□□□ -0.77
SMAD9-202ENST00000379826 ZNF304Q9HCX3 659 aa10.24□□□□□ -0.77
SMAD9-202ENST00000379826 TRBV11-1A0A0K0K1C0 115 aa10.23□□□□□ -0.77
SMAD9-202ENST00000379826 PLSCR5A0PG75 271 aa10.23□□□□□ -0.77
SMAD9-202ENST00000379826 A8MVM7 634 aa10.23□□□□□ -0.77
SMAD9-202ENST00000379826 DCTN6O00399 190 aa10.23□□□□□ -0.77
SMAD9-202ENST00000379826 NME2P1O60361 137 aa10.23□□□□□ -0.77
SMAD9-202ENST00000379826 IL33O95760 270 aa10.23□□□□□ -0.77
SMAD9-202ENST00000379826 SLC25A1P53007 311 aa10.23□□□□□ -0.77
SMAD9-202ENST00000379826 IL10RAQ13651 578 aa10.23□□□□□ -0.77
SMAD9-202ENST00000379826 RHEBQ15382 184 aa10.23□□□□□ -0.77
SMAD9-202ENST00000379826 FAM189A2Q15884 450 aa10.23□□□□□ -0.77
SMAD9-202ENST00000379826 STPG1Q5TH74 334 aa10.23□□□□□ -0.77
SMAD9-202ENST00000379826 BATF2Q8N1L9 274 aa10.23□□□□□ -0.77
SMAD9-202ENST00000379826 CRIPAKQ8N1N5 446 aa10.23□□□□□ -0.77
SMAD9-202ENST00000379826 S100PBPQ96BU1 408 aa10.23□□□□□ -0.77
SMAD9-202ENST00000379826 FER1L6-AS2Q96M78 137 aa10.23□□□□□ -0.77
SMAD9-202ENST00000379826 MENTQ9BUN1 341 aa10.23□□□□□ -0.77
SMAD9-202ENST00000379826 SLC19A3Q9BZV2 496 aa10.23□□□□□ -0.77
SMAD9-202ENST00000379826 SMOC1Q9H4F8 434 aa10.23□□□□□ -0.77
SMAD9-202ENST00000379826 MMP17Q9ULZ9 603 aa10.23□□□□□ -0.77
SMAD9-202ENST00000379826 PRELID3BQ9Y3B1 194 aa10.23□□□□□ -0.77
SMAD9-202ENST00000379826 SCN2AQ99250 2005 aa10.23□□□□□ -0.77
SMAD9-202ENST00000379826 FAM157BP0CG42 384 aa10.23□□□□□ -0.77
SMAD9-202ENST00000379826 CD27P26842 260 aa10.23□□□□□ -0.77
SMAD9-202ENST00000379826 S100A2P29034 98 aa10.23□□□□□ -0.77
SMAD9-202ENST00000379826 BLVRBP30043 206 aaPredicted RBP10.23□□□□□ -0.77
SMAD9-202ENST00000379826 GFERP55789 205 aa10.23□□□□□ -0.77
SMAD9-202ENST00000379826 GGTLC2Q14390 218 aa10.23□□□□□ -0.77
SMAD9-202ENST00000379826 RAET1LQ5VY80 246 aa10.23□□□□□ -0.77
SMAD9-202ENST00000379826 ZNF565Q8N9K5 539 aa10.23□□□□□ -0.77
SMAD9-202ENST00000379826 OR52N5Q8NH56 324 aa10.23□□□□□ -0.77
SMAD9-202ENST00000379826 OR1S1Q8NH92 325 aa10.23□□□□□ -0.77
SMAD9-202ENST00000379826 IFI44Q8TCB0 444 aa10.23□□□□□ -0.77
SMAD9-202ENST00000379826 SLAMF6Q96DU3 332 aa10.23□□□□□ -0.77
SMAD9-202ENST00000379826 MRGPRX1Q96LB2 322 aa10.23□□□□□ -0.77
SMAD9-202ENST00000379826 ZNF649Q9BS31 505 aa10.23□□□□□ -0.77
SMAD9-202ENST00000379826 DEFB126Q9BYW3 111 aa10.23□□□□□ -0.77
SMAD9-202ENST00000379826 C1orf198Q9H425 327 aa10.23□□□□□ -0.77
SMAD9-202ENST00000379826 MTRF1O75570 445 aaKnown RBP10.23□□□□□ -0.77
SMAD9-202ENST00000379826 CD96P40200 585 aa10.23□□□□□ -0.77
SMAD9-202ENST00000379826 GLP1RP43220 463 aa10.23□□□□□ -0.77
SMAD9-202ENST00000379826 YPEL5P62699 121 aa10.23□□□□□ -0.77
SMAD9-202ENST00000379826 PPA1Q15181 289 aa10.23□□□□□ -0.77
SMAD9-202ENST00000379826 PAN3Q58A45 887 aaKnown RBP10.23□□□□□ -0.77
SMAD9-202ENST00000379826 DHRS13Q6UX07 377 aa10.23□□□□□ -0.77
SMAD9-202ENST00000379826 ESX1Q8N693 406 aa10.23□□□□□ -0.77
SMAD9-202ENST00000379826 NKAIN3Q8N8D7 197 aa10.23□□□□□ -0.77
SMAD9-202ENST00000379826 PIGTQ969N2 578 aa10.23□□□□□ -0.77
SMAD9-202ENST00000379826 LAT2Q9GZY6 243 aa10.23□□□□□ -0.77
SMAD9-202ENST00000379826 SCN5AQ14524 2016 aa10.23□□□□□ -0.77
SMAD9-202ENST00000379826 SYNGR4O95473 234 aa10.23□□□□□ -0.77
SMAD9-202ENST00000379826 HOXD4P09016 255 aaPredicted RBP10.23□□□□□ -0.77
SMAD9-202ENST00000379826 GNRHRP30968 328 aa10.23□□□□□ -0.77
SMAD9-202ENST00000379826 CAV2P51636 162 aa10.23□□□□□ -0.77
SMAD9-202ENST00000379826 ZNF141Q15928 474 aa10.23□□□□□ -0.77
SMAD9-202ENST00000379826 ZNF674Q2M3X9 581 aa10.23□□□□□ -0.77
SMAD9-202ENST00000379826 FAM122BQ7Z309 247 aa10.23□□□□□ -0.77
SMAD9-202ENST00000379826 HSD17B13Q7Z5P4 300 aaPredicted RBP10.23□□□□□ -0.77
SMAD9-202ENST00000379826 FAM74A7A6NL05 159 aa10.23□□□□□ -0.77
SMAD9-202ENST00000379826 NSA2O95478 260 aaKnown RBP10.23□□□□□ -0.77
SMAD9-202ENST00000379826 GLI4P10075 376 aa10.23□□□□□ -0.77
SMAD9-202ENST00000379826 ZNF16P17020 682 aaPredicted RBP10.23□□□□□ -0.77
SMAD9-202ENST00000379826 CPT2P23786 658 aa10.23□□□□□ -0.77
SMAD9-202ENST00000379826 FAM74A3Q4VXF1 159 aa10.23□□□□□ -0.77
SMAD9-202ENST00000379826 ADAD2Q8NCV1 583 aaKnown RBP10.23□□□□□ -0.77
SMAD9-202ENST00000379826 NANPQ8TBE9 248 aa10.23□□□□□ -0.77
SMAD9-202ENST00000379826 LRFN3Q9BTN0 628 aa10.23□□□□□ -0.77
SMAD9-202ENST00000379826 GDF2Q9UK05 429 aaPredicted RBP10.23□□□□□ -0.77
SMAD9-202ENST00000379826 C9orf170A2RU37 121 aa10.22□□□□□ -0.77
SMAD9-202ENST00000379826 J3QRE1 110 aa10.22□□□□□ -0.77
SMAD9-202ENST00000379826 NUDT21O43809 227 aaKnown RBP10.22□□□□□ -0.77
SMAD9-202ENST00000379826 CDAP32320 146 aa10.22□□□□□ -0.77
SMAD9-202ENST00000379826 CSF2RBP32927 897 aa10.22□□□□□ -0.77
SMAD9-202ENST00000379826 CD80P33681 288 aa10.22□□□□□ -0.77
SMAD9-202ENST00000379826 IAH1Q2TAA2 248 aaPredicted RBP10.22□□□□□ -0.77
SMAD9-202ENST00000379826 ZNF660Q6AZW8 331 aaPredicted RBP10.22□□□□□ -0.77
SMAD9-202ENST00000379826 BMFQ96LC9 184 aa10.22□□□□□ -0.77
SMAD9-202ENST00000379826 MFRPQ9BY79 579 aa10.22□□□□□ -0.77
SMAD9-202ENST00000379826 OR10A2Q9H208 303 aa10.22□□□□□ -0.77
SMAD9-202ENST00000379826 KLHL13Q9P2N7 655 aa10.22□□□□□ -0.77
SMAD9-202ENST00000379826 TRPM7Q96QT4 1865 aa10.22□□□□□ -0.77
SMAD9-202ENST00000379826 ARPC3O15145 178 aa10.22□□□□□ -0.77
SMAD9-202ENST00000379826 ZNF749O43361 778 aa10.22□□□□□ -0.77
SMAD9-202ENST00000379826 SLC26A5P58743 744 aa10.22□□□□□ -0.77
SMAD9-202ENST00000379826 SELENOVP59797 346 aa10.22□□□□□ -0.77
SMAD9-202ENST00000379826 ATPAF1Q5TC12 328 aaPredicted RBP10.22□□□□□ -0.77
SMAD9-202ENST00000379826 OR6K3Q8NGY3 331 aa10.22□□□□□ -0.77
SMAD9-202ENST00000379826 AMELYQ99218 206 aa10.22□□□□□ -0.77
SMAD9-202ENST00000379826 PBOV1Q9GZY1 135 aa10.22□□□□□ -0.77
SMAD9-202ENST00000379826 ZNF442Q9H7R0 627 aa10.22□□□□□ -0.77
SMAD9-202ENST00000379826 TRPM6Q9BX84 2022 aa10.22□□□□□ -0.77
SMAD9-202ENST00000379826 RD3LP0DJH9 198 aa10.22□□□□□ -0.77
SMAD9-202ENST00000379826 TUBG1P23258 451 aa10.22□□□□□ -0.77
SMAD9-202ENST00000379826 S100GP29377 79 aa10.22□□□□□ -0.77
SMAD9-202ENST00000379826 KIR3DL2P43630 455 aa10.22□□□□□ -0.77
SMAD9-202ENST00000379826 HSD17B7P56937 341 aa10.22□□□□□ -0.77
SMAD9-202ENST00000379826 HSD11B2P80365 405 aa10.22□□□□□ -0.77
SMAD9-202ENST00000379826 TSC22D1Q15714 1073 aa10.22□□□□□ -0.77
SMAD9-202ENST00000379826 PPP1R3BQ86XI6 285 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms