RNA–Protein interactions for RNA: ENST00000374747.9

NPLOC4-202, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 2 BASIC

Gene NPLOC4, Length 5,538 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-202ENST00000374747 WNT16Q9UBV4 365 aa11.16□□□□□ -0.62
NPLOC4-202ENST00000374747 SPTY2D1-AS1A0A0U1RR47 76 aa11.16□□□□□ -0.62
NPLOC4-202ENST00000374747 IFITM5A6NNB3 132 aa11.16□□□□□ -0.62
NPLOC4-202ENST00000374747 SIGLEC6O43699 453 aa11.16□□□□□ -0.62
NPLOC4-202ENST00000374747 OR4E1P0C645 316 aa11.16□□□□□ -0.62
NPLOC4-202ENST00000374747 UBE2MP61081 183 aaKnown RBP11.16□□□□□ -0.62
NPLOC4-202ENST00000374747 EMC4Q5J8M3 183 aa11.16□□□□□ -0.62
NPLOC4-202ENST00000374747 FAM74A1Q5RGS3 127 aa11.16□□□□□ -0.62
NPLOC4-202ENST00000374747 RPUSD3Q6P087 351 aaKnown RBP11.16□□□□□ -0.62
NPLOC4-202ENST00000374747 TMEM123Q8N131 208 aa11.16□□□□□ -0.62
NPLOC4-202ENST00000374747 SPNS1Q9H2V7 528 aa11.16□□□□□ -0.62
NPLOC4-202ENST00000374747 FLVCR2Q9UPI3 526 aa11.16□□□□□ -0.62
NPLOC4-202ENST00000374747 GPR171O14626 319 aa11.16□□□□□ -0.62
NPLOC4-202ENST00000374747 UBE2G1P62253 170 aa11.16□□□□□ -0.62
NPLOC4-202ENST00000374747 ZNF90Q03938 601 aa11.16□□□□□ -0.62
NPLOC4-202ENST00000374747 TP53I13Q8NBR0 393 aaPredicted RBP11.16□□□□□ -0.62
NPLOC4-202ENST00000374747 EMG1Q92979 244 aaKnown RBP11.16□□□□□ -0.62
NPLOC4-202ENST00000374747 ZNF251Q9BRH9 671 aa11.16□□□□□ -0.62
NPLOC4-202ENST00000374747 SRRQ9GZT4 340 aa11.16□□□□□ -0.62
NPLOC4-202ENST00000374747 ZNF586Q9NXT0 402 aa11.16□□□□□ -0.62
NPLOC4-202ENST00000374747 WSB2Q9NYS7 404 aaPredicted RBP11.16□□□□□ -0.62
NPLOC4-202ENST00000374747 BRCA1P38398 1863 aaKnown RBP11.15□□□□□ -0.62
NPLOC4-202ENST00000374747 E5RGE8 158 aa11.15□□□□□ -0.62
NPLOC4-202ENST00000374747 DVL1O14640 695 aa11.15□□□□□ -0.62
NPLOC4-202ENST00000374747 SLC2A10O95528 541 aa11.15□□□□□ -0.62
NPLOC4-202ENST00000374747 HIST1H1CP16403 213 aaKnown RBP11.15□□□□□ -0.62
NPLOC4-202ENST00000374747 TBPP20226 339 aa11.15□□□□□ -0.62
NPLOC4-202ENST00000374747 DIO1P49895 249 aa11.15□□□□□ -0.62
NPLOC4-202ENST00000374747 DVL1P1P54792 670 aaPredicted RBP11.15□□□□□ -0.62
NPLOC4-202ENST00000374747 SNRPNP63162 240 aaKnown RBP11.15□□□□□ -0.62
NPLOC4-202ENST00000374747 ZNF626Q68DY1 528 aa11.15□□□□□ -0.62
NPLOC4-202ENST00000374747 MAFAQ8NHW3 353 aaPredicted RBP11.15□□□□□ -0.62
NPLOC4-202ENST00000374747 STT3BQ8TCJ2 826 aa11.15□□□□□ -0.62
NPLOC4-202ENST00000374747 SMIM19Q96E16 107 aa11.15□□□□□ -0.62
NPLOC4-202ENST00000374747 RBM38Q9H0Z9 239 aaKnown RBP11.15□□□□□ -0.62
NPLOC4-202ENST00000374747 OPA3Q9H6K4 179 aa11.15□□□□□ -0.62
NPLOC4-202ENST00000374747 NSG2Q9Y328 171 aa11.15□□□□□ -0.62
NPLOC4-202ENST00000374747 CBY1Q9Y3M2 126 aa11.15□□□□□ -0.62
NPLOC4-202ENST00000374747 MBTPS2O43462 519 aa11.15□□□□□ -0.62
NPLOC4-202ENST00000374747 CD37P11049 281 aa11.15□□□□□ -0.62
NPLOC4-202ENST00000374747 CAPZBP47756 277 aa11.15□□□□□ -0.62
NPLOC4-202ENST00000374747 AQP6Q13520 282 aa11.15□□□□□ -0.62
NPLOC4-202ENST00000374747 RAB35Q15286 201 aa11.15□□□□□ -0.62
NPLOC4-202ENST00000374747 Q6ZS52 159 aa11.15□□□□□ -0.62
NPLOC4-202ENST00000374747 OR2A1Q8NGT9 310 aa11.15□□□□□ -0.62
NPLOC4-202ENST00000374747 OR2AE1Q8NHA4 323 aa11.15□□□□□ -0.62
NPLOC4-202ENST00000374747 UCN3Q969E3 161 aa11.15□□□□□ -0.62
NPLOC4-202ENST00000374747 OR51I2Q9H344 312 aa11.15□□□□□ -0.62
NPLOC4-202ENST00000374747 CALHM2Q9HA72 323 aa11.15□□□□□ -0.62
NPLOC4-202ENST00000374747 SLC35D1Q9NTN3 355 aa11.15□□□□□ -0.62
NPLOC4-202ENST00000374747 C19orf53Q9UNZ5 99 aaPredicted RBP11.15□□□□□ -0.62
NPLOC4-202ENST00000374747 SEC14L6B5MCN3 397 aa11.15□□□□□ -0.62
NPLOC4-202ENST00000374747 DEGS1O15121 323 aa11.15□□□□□ -0.62
NPLOC4-202ENST00000374747 ZNF749O43361 778 aa11.15□□□□□ -0.62
NPLOC4-202ENST00000374747 SCO1O75880 301 aa11.15□□□□□ -0.62
NPLOC4-202ENST00000374747 CD1CP29017 333 aa11.15□□□□□ -0.62
NPLOC4-202ENST00000374747 SDHAP31040 664 aa11.15□□□□□ -0.62
NPLOC4-202ENST00000374747 EMP3P54852 163 aa11.15□□□□□ -0.62
NPLOC4-202ENST00000374747 OR10A3P58181 314 aa11.15□□□□□ -0.62
NPLOC4-202ENST00000374747 FAAP20Q6NZ36 180 aa11.15□□□□□ -0.62
NPLOC4-202ENST00000374747 PLXDC2Q6UX71 529 aa11.15□□□□□ -0.62
NPLOC4-202ENST00000374747 SLC38A9Q8NBW4 561 aa11.15□□□□□ -0.62
NPLOC4-202ENST00000374747 CLRN3Q8NCR9 226 aa11.15□□□□□ -0.62
NPLOC4-202ENST00000374747 SLC25A43Q8WUT9 341 aaPredicted RBP11.15□□□□□ -0.62
NPLOC4-202ENST00000374747 CCDC74AQ96AQ1 378 aa11.15□□□□□ -0.62
NPLOC4-202ENST00000374747 SAT2Q96F10 170 aaPredicted RBP11.15□□□□□ -0.62
NPLOC4-202ENST00000374747 SDF2Q99470 211 aa11.15□□□□□ -0.62
NPLOC4-202ENST00000374747 A0A1W2PR48 441 aa11.15□□□□□ -0.63
NPLOC4-202ENST00000374747 C4orf47A7E2U8 309 aa11.15□□□□□ -0.63
NPLOC4-202ENST00000374747 RBP2P50120 134 aa11.15□□□□□ -0.63
NPLOC4-202ENST00000374747 EDDM3BP56851 147 aa11.15□□□□□ -0.63
NPLOC4-202ENST00000374747 EIF4EBP2Q13542 120 aaPredicted RBP11.15□□□□□ -0.63
NPLOC4-202ENST00000374747 FAHD1Q6P587 224 aa11.15□□□□□ -0.63
NPLOC4-202ENST00000374747 VHLLQ6RSH7 139 aa11.15□□□□□ -0.63
NPLOC4-202ENST00000374747 TMEM18Q96B42 140 aa11.15□□□□□ -0.63
NPLOC4-202ENST00000374747 CABLES2Q9BTV7 478 aa11.15□□□□□ -0.63
NPLOC4-202ENST00000374747 ZNF816-ZNF321PA0A0X1KG74 233 aa11.14□□□□□ -0.63
NPLOC4-202ENST00000374747 B3GALT4O96024 378 aa11.14□□□□□ -0.63
NPLOC4-202ENST00000374747 IL3RAP26951 378 aa11.14□□□□□ -0.63
NPLOC4-202ENST00000374747 GPR85P60893 370 aa11.14□□□□□ -0.63
NPLOC4-202ENST00000374747 ANKRD34AQ69YU3 496 aa11.14□□□□□ -0.63
NPLOC4-202ENST00000374747 LCN15Q6UWW0 184 aa11.14□□□□□ -0.63
NPLOC4-202ENST00000374747 ZNF321PQ8N8H1 164 aa11.14□□□□□ -0.63
NPLOC4-202ENST00000374747 GOT1L1Q8NHS2 421 aaPredicted RBP11.14□□□□□ -0.63
NPLOC4-202ENST00000374747 UTP23Q9BRU9 249 aaKnown RBP11.14□□□□□ -0.63
NPLOC4-202ENST00000374747 MRPL22Q9NWU5 206 aaKnown RBP11.14□□□□□ -0.63
NPLOC4-202ENST00000374747 A0A0G2JMZ2 1700 aa11.14□□□□□ -0.63
NPLOC4-202ENST00000374747 LRRC37A2A6NM11 1700 aa11.14□□□□□ -0.63
NPLOC4-202ENST00000374747 HSPB2A8KAH6 182 aa11.14□□□□□ -0.63
NPLOC4-202ENST00000374747 TMPRSS11DO60235 418 aa11.14□□□□□ -0.63
NPLOC4-202ENST00000374747 HSPB2Q16082 182 aa11.14□□□□□ -0.63
NPLOC4-202ENST00000374747 ZBTB37Q5TC79 503 aa11.14□□□□□ -0.63
NPLOC4-202ENST00000374747 NECAP1Q8NC96 275 aa11.14□□□□□ -0.63
NPLOC4-202ENST00000374747 OR4F5Q8NH21 305 aa11.14□□□□□ -0.63
NPLOC4-202ENST00000374747 FBXW5Q969U6 566 aa11.14□□□□□ -0.63
NPLOC4-202ENST00000374747 OR4F4Q96R69 305 aa11.14□□□□□ -0.63
NPLOC4-202ENST00000374747 GABRG3Q99928 467 aa11.14□□□□□ -0.63
NPLOC4-202ENST00000374747 SLCO1B1Q9Y6L6 691 aa11.14□□□□□ -0.63
NPLOC4-202ENST00000374747 PRAMEF25A6NGN4 478 aa11.14□□□□□ -0.63
NPLOC4-202ENST00000374747 FXYD1O00168 92 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms