RNA–Protein interactions for RNA: ENST00000361198.9

LDB1-201, Transcript of LIM domain binding 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LDB1, Length 2,285 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-201ENST00000361198 GTF2F2P13984 249 aa20.05■□□□□ 0.8
LDB1-201ENST00000361198 GPR85P60893 370 aa20.05■□□□□ 0.8
LDB1-201ENST00000361198 SEC61A1P61619 476 aaKnown RBP20.05■□□□□ 0.8
LDB1-201ENST00000361198 SLC35A1P78382 337 aa20.05■□□□□ 0.8
LDB1-201ENST00000361198 CFAP77Q6ZQR2 320 aa20.05■□□□□ 0.8
LDB1-201ENST00000361198 OR2AK2Q8NG84 335 aa20.05■□□□□ 0.8
LDB1-201ENST00000361198 OR51S1Q8NGJ8 323 aa20.05■□□□□ 0.8
LDB1-201ENST00000361198 ALX4Q9H161 411 aaPredicted RBP20.05■□□□□ 0.8
LDB1-201ENST00000361198 PADI1Q9ULC6 663 aa20.05■□□□□ 0.8
LDB1-201ENST00000361198 TMEM272A0A1B0GTI8 110 aa20.04■□□□□ 0.8
LDB1-201ENST00000361198 ZIC3O60481 467 aa20.04■□□□□ 0.8
LDB1-201ENST00000361198 DNASE1L1P49184 302 aa20.04■□□□□ 0.8
LDB1-201ENST00000361198 DSCR4P56555 118 aaPredicted RBP20.04■□□□□ 0.8
LDB1-201ENST00000361198 TMEM244Q5VVB8 128 aa20.04■□□□□ 0.8
LDB1-201ENST00000361198 RAET1LQ5VY80 246 aa20.04■□□□□ 0.8
LDB1-201ENST00000361198 GLT8D1Q68CQ7 371 aa20.04■□□□□ 0.8
LDB1-201ENST00000361198 SLC25A47Q6Q0C1 308 aa20.04■□□□□ 0.8
LDB1-201ENST00000361198 MPPED2Q15777 294 aa20.04■□□□□ 0.8
LDB1-201ENST00000361198 C2orf68Q2NKX9 166 aa20.04■□□□□ 0.8
LDB1-201ENST00000361198 GLYATL3Q5SZD4 288 aa20.04■□□□□ 0.8
LDB1-201ENST00000361198 PPP1R32Q7Z5V6 425 aa20.04■□□□□ 0.8
LDB1-201ENST00000361198 MUC20Q8N307 709 aaPredicted RBP20.04■□□□□ 0.8
LDB1-201ENST00000361198 CGGBP1Q9UFW8 167 aaPredicted RBP20.04■□□□□ 0.8
LDB1-201ENST00000361198 GDF2Q9UK05 429 aaPredicted RBP20.04■□□□□ 0.8
LDB1-201ENST00000361198 TCFL5Q9UL49 500 aa20.04■□□□□ 0.8
LDB1-201ENST00000361198 LOC102725191A0A1B0GVB3 256 aa20.03■□□□□ 0.8
LDB1-201ENST00000361198 DCDC2BA2VCK2 349 aa20.03■□□□□ 0.8
LDB1-201ENST00000361198 SULT1C2O00338 296 aa20.03■□□□□ 0.8
LDB1-201ENST00000361198 CD3DP04234 171 aa20.03■□□□□ 0.8
LDB1-201ENST00000361198 RLN1P04808 185 aa20.03■□□□□ 0.8
LDB1-201ENST00000361198 ACSM4P0C7M7 580 aa20.03■□□□□ 0.8
LDB1-201ENST00000361198 ZNF883P0CG24 379 aa20.03■□□□□ 0.8
LDB1-201ENST00000361198 UBCP0CG48 685 aaKnown RBP20.03■□□□□ 0.8
LDB1-201ENST00000361198 TCN2P20062 427 aa20.03■□□□□ 0.8
LDB1-201ENST00000361198 OTX2P32243 289 aa20.03■□□□□ 0.8
LDB1-201ENST00000361198 H3F3AP84243 136 aa20.03■□□□□ 0.8
LDB1-201ENST00000361198 SPOCK1Q08629 439 aa20.03■□□□□ 0.8
LDB1-201ENST00000361198 HIST3H3Q16695 136 aa20.03■□□□□ 0.8
LDB1-201ENST00000361198 B3GNTL1Q67FW5 361 aaPredicted RBP20.03■□□□□ 0.8
LDB1-201ENST00000361198 TIPARPQ7Z3E1 657 aaKnown RBP20.03■□□□□ 0.8
LDB1-201ENST00000361198 MRPS18BQ9Y676 258 aaKnown RBP20.03■□□□□ 0.8
LDB1-201ENST00000361198 ZNF726A6NNF4 738 aa20.02■□□□□ 0.8
LDB1-201ENST00000361198 PMS2P2O95744 297 aa20.02■□□□□ 0.8
LDB1-201ENST00000361198 TTRP02766 147 aa20.02■□□□□ 0.8
LDB1-201ENST00000361198 QDPRP09417 244 aa20.02■□□□□ 0.8
LDB1-201ENST00000361198 SP9P0CG40 484 aa20.02■□□□□ 0.8
LDB1-201ENST00000361198 HTR2CP28335 458 aa20.02■□□□□ 0.8
LDB1-201ENST00000361198 S100A11P31949 105 aa20.02■□□□□ 0.8
LDB1-201ENST00000361198 CLDN6P56747 220 aa20.02■□□□□ 0.8
LDB1-201ENST00000361198 HLXQ14774 488 aaPredicted RBP20.02■□□□□ 0.8
LDB1-201ENST00000361198 STEAP1BQ6NZ63 245 aa20.02■□□□□ 0.8
LDB1-201ENST00000361198 KLHL24Q6TFL4 600 aa20.02■□□□□ 0.8
LDB1-201ENST00000361198 ARMC10Q8N2F6 343 aa20.02■□□□□ 0.8
LDB1-201ENST00000361198 RBPMSQ93062 196 aaKnown RBP20.02■□□□□ 0.8
LDB1-201ENST00000361198 MED9Q9NWA0 146 aa20.02■□□□□ 0.8
LDB1-201ENST00000361198 POLR1DQ9Y2S0 133 aa20.02■□□□□ 0.8
LDB1-201ENST00000361198 LNP1A1A4G5 178 aa20.02■□□□□ 0.8
LDB1-201ENST00000361198 M0R296 226 aa20.02■□□□□ 0.8
LDB1-201ENST00000361198 ACTBP60709 375 aa20.02■□□□□ 0.8
LDB1-201ENST00000361198 ACTG1P63261 375 aa20.02■□□□□ 0.8
LDB1-201ENST00000361198 Q0VFX4 171 aa20.02■□□□□ 0.8
LDB1-201ENST00000361198 ATG5Q9H1Y0 275 aa20.02■□□□□ 0.8
LDB1-201ENST00000361198 AHCTF1Q8WYP5 2266 aa20.01■□□□□ 0.79
LDB1-201ENST00000361198 B3GALNT1O75752 331 aa20.01■□□□□ 0.79
LDB1-201ENST00000361198 ITGB2P05107 769 aa20.01■□□□□ 0.79
LDB1-201ENST00000361198 CALCRP30988 508 aa20.01■□□□□ 0.79
LDB1-201ENST00000361198 CLDN17P56750 224 aa20.01■□□□□ 0.79
LDB1-201ENST00000361198 ASB13Q8WXK3 278 aa20.01■□□□□ 0.79
LDB1-201ENST00000361198 PBOV1Q9GZY1 135 aa20.01■□□□□ 0.79
LDB1-201ENST00000361198 DKKL1Q9UK85 242 aa20.01■□□□□ 0.79
LDB1-201ENST00000361198 IGHV3-15A0A0B4J1V0 119 aa20.01■□□□□ 0.79
LDB1-201ENST00000361198 LOC105371267A0A1B0GV96 52 aa20.01■□□□□ 0.79
LDB1-201ENST00000361198 F5H5P2 479 aa20.01■□□□□ 0.79
LDB1-201ENST00000361198 IGHEP01854 428 aa20.01■□□□□ 0.79
LDB1-201ENST00000361198 NCOA6Q14686 2063 aaPredicted RBP20.01■□□□□ 0.79
LDB1-201ENST00000361198 TMEM65Q6PI78 240 aa20.01■□□□□ 0.79
LDB1-201ENST00000361198 CHMP1BQ7LBR1 199 aa20.01■□□□□ 0.79
LDB1-201ENST00000361198 SEH1LQ96EE3 360 aa20.01■□□□□ 0.79
LDB1-201ENST00000361198 CCDC120Q96HB5 630 aa20.01■□□□□ 0.79
LDB1-201ENST00000361198 RDH8Q9NYR8 311 aa20.01■□□□□ 0.79
LDB1-201ENST00000361198 ASH2LQ9UBL3 628 aa20.01■□□□□ 0.79
LDB1-201ENST00000361198 MEIS3P1A6NDR6 274 aa20■□□□□ 0.79
LDB1-201ENST00000361198 SIX6O95475 246 aa20■□□□□ 0.79
LDB1-201ENST00000361198 GABRA1P14867 456 aa20■□□□□ 0.79
LDB1-201ENST00000361198 C6orf15Q6UXA7 325 aaPredicted RBP20■□□□□ 0.79
LDB1-201ENST00000361198 SLC38A6Q8IZM9 456 aa20■□□□□ 0.79
LDB1-201ENST00000361198 GABRG1Q8N1C3 465 aa20■□□□□ 0.79
LDB1-201ENST00000361198 OR2AJ1Q8NGZ0 328 aa20■□□□□ 0.79
LDB1-201ENST00000361198 CT55Q8WUE5 264 aa20■□□□□ 0.79
LDB1-201ENST00000361198 FGGYQ96C11 551 aa20■□□□□ 0.79
LDB1-201ENST00000361198 REG4Q9BYZ8 158 aa20■□□□□ 0.79
LDB1-201ENST00000361198 SCPEP1Q9HB40 452 aa20■□□□□ 0.79
LDB1-201ENST00000361198 ZNF224Q9NZL3 707 aa20■□□□□ 0.79
LDB1-201ENST00000361198 MEGF11A6BM72 1044 aa20■□□□□ 0.79
LDB1-201ENST00000361198 LPLP06858 475 aa20■□□□□ 0.79
LDB1-201ENST00000361198 ZNF35P13682 527 aa20■□□□□ 0.79
LDB1-201ENST00000361198 TAS2R19P59542 299 aa20■□□□□ 0.79
LDB1-201ENST00000361198 TMUB2Q71RG4 321 aa20■□□□□ 0.79
LDB1-201ENST00000361198 RAB11FIP2Q7L804 512 aa20■□□□□ 0.79
LDB1-201ENST00000361198 JAGN1Q8N5M9 183 aa20■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms