RNA–Protein interactions for RNA: ENST00000334258.9

SYNE3-201, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SYNE3, Length 3,275 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-201ENST00000334258 KCTD18Q6PI47 426 aaPredicted RBP12.31□□□□□ -0.44
SYNE3-201ENST00000334258 CHRDL2Q6WN34 429 aa12.31□□□□□ -0.44
SYNE3-201ENST00000334258 MISPQ8IVT2 679 aa12.31□□□□□ -0.44
SYNE3-201ENST00000334258 BCORP1Q8N888 145 aa12.31□□□□□ -0.44
SYNE3-201ENST00000334258 AKR7LQ8NHP1 331 aa12.31□□□□□ -0.44
SYNE3-201ENST00000334258 VSTM2LQ96N03 204 aa12.31□□□□□ -0.44
SYNE3-201ENST00000334258 ZNF576Q9H609 170 aa12.31□□□□□ -0.44
SYNE3-201ENST00000334258 TMEM100Q9NV29 134 aa12.31□□□□□ -0.44
SYNE3-201ENST00000334258 EMC9Q9Y3B6 208 aa12.31□□□□□ -0.44
SYNE3-201ENST00000334258 MEGF11A6BM72 1044 aa12.31□□□□□ -0.44
SYNE3-201ENST00000334258 DBX1A6NMT0 343 aa12.31□□□□□ -0.44
SYNE3-201ENST00000334258 OIP5O43482 229 aa12.31□□□□□ -0.44
SYNE3-201ENST00000334258 ADAP1O75689 374 aa12.31□□□□□ -0.44
SYNE3-201ENST00000334258 KLF8O95600 359 aaPredicted RBP12.31□□□□□ -0.44
SYNE3-201ENST00000334258 F2RL1P55085 397 aa12.31□□□□□ -0.44
SYNE3-201ENST00000334258 ALG11Q2TAA5 492 aa12.31□□□□□ -0.44
SYNE3-201ENST00000334258 TMEM196Q5HYL7 178 aa12.31□□□□□ -0.44
SYNE3-201ENST00000334258 FAM166AQ6J272 317 aa12.31□□□□□ -0.44
SYNE3-201ENST00000334258 MEGF10Q96KG7 1140 aa12.31□□□□□ -0.44
SYNE3-201ENST00000334258 LMF2Q9BU23 707 aaKnown RBP12.31□□□□□ -0.44
SYNE3-201ENST00000334258 RNF126Q9BV68 326 aa12.31□□□□□ -0.44
SYNE3-201ENST00000334258 DZANK1Q9NVP4 752 aa12.31□□□□□ -0.44
SYNE3-201ENST00000334258 TICRRQ7Z2Z1 1910 aa12.3□□□□□ -0.44
SYNE3-201ENST00000334258 C2orf74A8MZ97 194 aa12.3□□□□□ -0.44
SYNE3-201ENST00000334258 F8VVB4 439 aa12.3□□□□□ -0.44
SYNE3-201ENST00000334258 F8VWA3 439 aa12.3□□□□□ -0.44
SYNE3-201ENST00000334258 SNRNP70P08621 437 aaKnown RBP12.3□□□□□ -0.44
SYNE3-201ENST00000334258 HLA-GP17693 338 aa12.3□□□□□ -0.44
SYNE3-201ENST00000334258 LTBRP36941 435 aa12.3□□□□□ -0.44
SYNE3-201ENST00000334258 CAV2P51636 162 aa12.3□□□□□ -0.44
SYNE3-201ENST00000334258 SFTPA2Q8IWL1 248 aa12.3□□□□□ -0.44
SYNE3-201ENST00000334258 ZDHHC22Q8N966 263 aa12.3□□□□□ -0.44
SYNE3-201ENST00000334258 RNF128Q8TEB7 428 aa12.3□□□□□ -0.44
SYNE3-201ENST00000334258 OR1E3Q8WZA6 343 aa12.3□□□□□ -0.44
SYNE3-201ENST00000334258 AKR1E2Q96JD6 320 aa12.3□□□□□ -0.44
SYNE3-201ENST00000334258 THAP10Q9P2Z0 257 aaPredicted RBP12.3□□□□□ -0.44
SYNE3-201ENST00000334258 HHLA2Q9UM44 414 aa12.3□□□□□ -0.44
SYNE3-201ENST00000334258 M0R036 132 aa12.3□□□□□ -0.44
SYNE3-201ENST00000334258 HEXAP06865 529 aa12.3□□□□□ -0.44
SYNE3-201ENST00000334258 GNB3P16520 340 aa12.3□□□□□ -0.44
SYNE3-201ENST00000334258 NAAAQ02083 359 aa12.3□□□□□ -0.44
SYNE3-201ENST00000334258 SMAD4Q13485 552 aaKnown RBP12.3□□□□□ -0.44
SYNE3-201ENST00000334258 EBPQ15125 230 aaKnown RBP12.3□□□□□ -0.44
SYNE3-201ENST00000334258 TGIF1Q15583 401 aa12.3□□□□□ -0.44
SYNE3-201ENST00000334258 CD226Q15762 336 aa12.3□□□□□ -0.44
SYNE3-201ENST00000334258 EIF5AL1Q6IS14 154 aaKnown RBP12.3□□□□□ -0.44
SYNE3-201ENST00000334258 LRRC75AQ8NAA5 344 aa12.3□□□□□ -0.44
SYNE3-201ENST00000334258 OR4D6Q8NGJ1 314 aa12.3□□□□□ -0.44
SYNE3-201ENST00000334258 C16orf52Q8NHV5 167 aa12.3□□□□□ -0.44
SYNE3-201ENST00000334258 DGAT2Q96PD7 388 aa12.3□□□□□ -0.44
SYNE3-201ENST00000334258 LAT2Q9GZY6 243 aa12.3□□□□□ -0.44
SYNE3-201ENST00000334258 PARP12Q9H0J9 701 aaKnown RBP12.3□□□□□ -0.44
SYNE3-201ENST00000334258 ABCA7Q8IZY2 2146 aa12.3□□□□□ -0.44
SYNE3-201ENST00000334258 H0YIZ8 118 aa12.29□□□□□ -0.44
SYNE3-201ENST00000334258 IL2RAP01589 272 aa12.29□□□□□ -0.44
SYNE3-201ENST00000334258 FAM157CP0CG43 387 aa12.29□□□□□ -0.44
SYNE3-201ENST00000334258 NPY4RP50391 375 aa12.29□□□□□ -0.44
SYNE3-201ENST00000334258 RPP30P78346 268 aaKnown RBP12.29□□□□□ -0.44
SYNE3-201ENST00000334258 ATG4DQ86TL0 474 aaPredicted RBP12.29□□□□□ -0.44
SYNE3-201ENST00000334258 BHLHE23Q8NDY6 225 aa12.29□□□□□ -0.44
SYNE3-201ENST00000334258 ASB17Q8WXJ9 295 aa12.29□□□□□ -0.44
SYNE3-201ENST00000334258 ISOC2Q96AB3 205 aa12.29□□□□□ -0.44
SYNE3-201ENST00000334258 HRASLS2Q9NWW9 162 aa12.29□□□□□ -0.44
SYNE3-201ENST00000334258 WIF1Q9Y5W5 379 aa12.29□□□□□ -0.44
SYNE3-201ENST00000334258 NPIPB9F8W1W9 429 aa12.29□□□□□ -0.44
SYNE3-201ENST00000334258 CT45A8P0DMV1 189 aa12.29□□□□□ -0.44
SYNE3-201ENST00000334258 CT45A9P0DMV2 189 aa12.29□□□□□ -0.44
SYNE3-201ENST00000334258 COX5BP10606 129 aa12.29□□□□□ -0.44
SYNE3-201ENST00000334258 HOXB2P14652 356 aa12.29□□□□□ -0.44
SYNE3-201ENST00000334258 C5AR1P21730 350 aa12.29□□□□□ -0.44
SYNE3-201ENST00000334258 CLINT1Q14677 625 aa12.29□□□□□ -0.44
SYNE3-201ENST00000334258 CT45A2Q5DJT8 189 aa12.29□□□□□ -0.44
SYNE3-201ENST00000334258 EMC4Q5J8M3 183 aa12.29□□□□□ -0.44
SYNE3-201ENST00000334258 ZNF615Q8N8J6 731 aa12.29□□□□□ -0.44
SYNE3-201ENST00000334258 DMBX1Q8NFW5 382 aa12.29□□□□□ -0.44
SYNE3-201ENST00000334258 PATE1Q8WXA2 126 aa12.29□□□□□ -0.44
SYNE3-201ENST00000334258 TAAR8Q969N4 342 aa12.29□□□□□ -0.44
SYNE3-201ENST00000334258 NAA11Q9BSU3 229 aaPredicted RBP12.29□□□□□ -0.44
SYNE3-201ENST00000334258 RSRP1Q9BUV0 290 aa12.29□□□□□ -0.44
SYNE3-201ENST00000334258 UCK1Q9HA47 277 aa12.29□□□□□ -0.44
SYNE3-201ENST00000334258 CYTL1Q9NRR1 136 aa12.29□□□□□ -0.44
SYNE3-201ENST00000334258 CENPMQ9NSP4 180 aa12.29□□□□□ -0.44
SYNE3-201ENST00000334258 GDF2Q9UK05 429 aaPredicted RBP12.29□□□□□ -0.44
SYNE3-201ENST00000334258 CNTRLQ7Z7A1 2325 aa12.29□□□□□ -0.44
SYNE3-201ENST00000334258 SCDO00767 359 aa12.29□□□□□ -0.44
SYNE3-201ENST00000334258 MBTPS2O43462 519 aa12.29□□□□□ -0.44
SYNE3-201ENST00000334258 ASAH2BP0C7U1 165 aa12.29□□□□□ -0.44
SYNE3-201ENST00000334258 PPM1FP49593 454 aaPredicted RBP12.29□□□□□ -0.44
SYNE3-201ENST00000334258 RAB38P57729 211 aa12.29□□□□□ -0.44
SYNE3-201ENST00000334258 EGR4Q05215 589 aa12.29□□□□□ -0.44
SYNE3-201ENST00000334258 ECH1Q13011 328 aa12.29□□□□□ -0.44
SYNE3-201ENST00000334258 MST1LQ2TV78 715 aa12.29□□□□□ -0.44
SYNE3-201ENST00000334258 C1QL3Q5VWW1 255 aa12.29□□□□□ -0.44
SYNE3-201ENST00000334258 MED25Q71SY5 747 aa12.29□□□□□ -0.44
SYNE3-201ENST00000334258 ZNF440Q8IYI8 595 aa12.29□□□□□ -0.44
SYNE3-201ENST00000334258 OR4K15Q8NH41 348 aa12.29□□□□□ -0.44
SYNE3-201ENST00000334258 RLN3Q8WXF3 142 aa12.29□□□□□ -0.44
SYNE3-201ENST00000334258 C20orf24Q9BUV8 137 aa12.29□□□□□ -0.44
SYNE3-201ENST00000334258 SEC61A2Q9H9S3 476 aa12.29□□□□□ -0.44
SYNE3-201ENST00000334258 ACKR4Q9NPB9 350 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms