RNA–Protein interactions for RNA: ENST00000302190.8

SDC2-201, Transcript of syndecan 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDC2, Length 3,759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-201ENST00000302190 TFAP2EQ6VUC0 442 aa12.63□□□□□ -0.39
SDC2-201ENST00000302190 STPG2Q8N412 459 aa12.63□□□□□ -0.39
SDC2-201ENST00000302190 TCEAL3Q969E4 200 aa12.63□□□□□ -0.39
SDC2-201ENST00000302190 OR6C1Q96RD1 312 aa12.63□□□□□ -0.39
SDC2-201ENST00000302190 NIT2Q9NQR4 276 aa12.63□□□□□ -0.39
SDC2-201ENST00000302190 AUP1Q9Y679 476 aa12.63□□□□□ -0.39
SDC2-201ENST00000302190 KCNMB2Q9Y691 235 aa12.63□□□□□ -0.39
SDC2-201ENST00000302190 IGHV3-15A0A0B4J1V0 119 aa12.62□□□□□ -0.39
SDC2-201ENST00000302190 NDUFS6O75380 124 aaKnown RBP12.62□□□□□ -0.39
SDC2-201ENST00000302190 ADRA2CP18825 462 aa12.62□□□□□ -0.39
SDC2-201ENST00000302190 CLDN17P56750 224 aa12.62□□□□□ -0.39
SDC2-201ENST00000302190 RBM39Q14498 530 aaKnown RBP12.62□□□□□ -0.39
SDC2-201ENST00000302190 PAN3Q58A45 887 aaKnown RBP12.62□□□□□ -0.39
SDC2-201ENST00000302190 FAM199XQ6PEV8 388 aaPredicted RBP12.62□□□□□ -0.39
SDC2-201ENST00000302190 WNT2BQ93097 391 aa12.62□□□□□ -0.39
SDC2-201ENST00000302190 OR8B4Q96RC9 309 aa12.62□□□□□ -0.39
SDC2-201ENST00000302190 C8orf33Q9H7E9 229 aaPredicted RBP12.62□□□□□ -0.39
SDC2-201ENST00000302190 DKKL1Q9UK85 242 aa12.62□□□□□ -0.39
SDC2-201ENST00000302190 SLC5A6Q9Y289 635 aa12.62□□□□□ -0.39
SDC2-201ENST00000302190 LRRK1Q38SD2 2015 aa12.62□□□□□ -0.39
SDC2-201ENST00000302190 ANKRD20A5PA0PJZ0 165 aa12.62□□□□□ -0.39
SDC2-201ENST00000302190 OR4C45A6NMZ5 311 aa12.62□□□□□ -0.39
SDC2-201ENST00000302190 ATG12O94817 140 aa12.62□□□□□ -0.39
SDC2-201ENST00000302190 PMS2P2O95744 297 aa12.62□□□□□ -0.39
SDC2-201ENST00000302190 ZNF16P17020 682 aaPredicted RBP12.62□□□□□ -0.39
SDC2-201ENST00000302190 SPINK2P20155 84 aa12.62□□□□□ -0.39
SDC2-201ENST00000302190 GALP22466 123 aa12.62□□□□□ -0.39
SDC2-201ENST00000302190 ABCD3P28288 659 aa12.62□□□□□ -0.39
SDC2-201ENST00000302190 SERPINF1P36955 418 aa12.62□□□□□ -0.39
SDC2-201ENST00000302190 PPT1P50897 306 aa12.62□□□□□ -0.39
SDC2-201ENST00000302190 MFGE8Q08431 387 aaPredicted RBP12.62□□□□□ -0.39
SDC2-201ENST00000302190 C14orf28Q4W4Y0 310 aa12.62□□□□□ -0.39
SDC2-201ENST00000302190 CMIPQ8IY22 773 aa12.62□□□□□ -0.39
SDC2-201ENST00000302190 FAM181AQ8N9Y4 354 aa12.62□□□□□ -0.39
SDC2-201ENST00000302190 HOXB13Q92826 284 aaPredicted RBP12.62□□□□□ -0.39
SDC2-201ENST00000302190 ZC3H10Q96K80 434 aaKnown RBP12.62□□□□□ -0.39
SDC2-201ENST00000302190 ZNF442Q9H7R0 627 aa12.62□□□□□ -0.39
SDC2-201ENST00000302190 MMP17Q9ULZ9 603 aa12.62□□□□□ -0.39
SDC2-201ENST00000302190 CSAG2Q9Y5P2 127 aa12.62□□□□□ -0.39
SDC2-201ENST00000302190 A0A0G2JK05 382 aa12.61□□□□□ -0.39
SDC2-201ENST00000302190 TMEM272A0A1B0GTI8 110 aa12.61□□□□□ -0.39
SDC2-201ENST00000302190 MED19A0JLT2 244 aaPredicted RBP12.61□□□□□ -0.39
SDC2-201ENST00000302190 FOXS1O43638 330 aa12.61□□□□□ -0.39
SDC2-201ENST00000302190 NXPH3O95157 252 aa12.61□□□□□ -0.39
SDC2-201ENST00000302190 VSIG10L2P0DP72 767 aa12.61□□□□□ -0.39
SDC2-201ENST00000302190 OMGP23515 440 aa12.61□□□□□ -0.39
SDC2-201ENST00000302190 ATP1B3P54709 279 aa12.61□□□□□ -0.39
SDC2-201ENST00000302190 RIPPLY1Q0D2K3 151 aa12.61□□□□□ -0.39
SDC2-201ENST00000302190 DHRS2Q13268 280 aa12.61□□□□□ -0.39
SDC2-201ENST00000302190 ZNF658BQ4V348 819 aaPredicted RBP12.61□□□□□ -0.39
SDC2-201ENST00000302190 MANEAQ5SRI9 462 aa12.61□□□□□ -0.39
SDC2-201ENST00000302190 PDSS1Q5T2R2 415 aa12.61□□□□□ -0.39
SDC2-201ENST00000302190 STT3BQ8TCJ2 826 aa12.61□□□□□ -0.39
SDC2-201ENST00000302190 SLAMF6Q96DU3 332 aa12.61□□□□□ -0.39
SDC2-201ENST00000302190 C20orf24Q9BUV8 137 aa12.61□□□□□ -0.39
SDC2-201ENST00000302190 SLCO1B1Q9Y6L6 691 aa12.61□□□□□ -0.39
SDC2-201ENST00000302190 NUP210Q8TEM1 1887 aaPredicted RBP12.61□□□□□ -0.39
SDC2-201ENST00000302190 PLXNB3Q9ULL4 1909 aa12.61□□□□□ -0.39
SDC2-201ENST00000302190 D6RAR5 112 aa12.61□□□□□ -0.39
SDC2-201ENST00000302190 SLC17A2O00624 439 aa12.61□□□□□ -0.39
SDC2-201ENST00000302190 KLF4O43474 513 aa12.61□□□□□ -0.39
SDC2-201ENST00000302190 CBR1P16152 277 aa12.61□□□□□ -0.39
SDC2-201ENST00000302190 OPRM1P35372 400 aa12.61□□□□□ -0.39
SDC2-201ENST00000302190 ELAVL1Q15717 326 aaKnown RBP12.61□□□□□ -0.39
SDC2-201ENST00000302190 CDH26Q8IXH8 852 aa12.61□□□□□ -0.39
SDC2-201ENST00000302190 SLC19A3Q9BZV2 496 aa12.61□□□□□ -0.39
SDC2-201ENST00000302190 HEXA-AS1Q9H8Q6 139 aa12.61□□□□□ -0.39
SDC2-201ENST00000302190 HAO2Q9NYQ3 351 aa12.61□□□□□ -0.39
SDC2-201ENST00000302190 RARRES3Q9UL19 164 aa12.61□□□□□ -0.39
SDC2-201ENST00000302190 PCDHGA1Q9Y5H4 931 aa12.61□□□□□ -0.39
SDC2-201ENST00000302190 FCGR2AP12318 317 aa12.61□□□□□ -0.39
SDC2-201ENST00000302190 CAV2P51636 162 aa12.61□□□□□ -0.39
SDC2-201ENST00000302190 HSF1Q00613 529 aa12.61□□□□□ -0.39
SDC2-201ENST00000302190 PDCD1Q15116 288 aa12.61□□□□□ -0.39
SDC2-201ENST00000302190 EIF5AL1Q6IS14 154 aaKnown RBP12.61□□□□□ -0.39
SDC2-201ENST00000302190 ATRAIDQ6UW56 229 aa12.61□□□□□ -0.39
SDC2-201ENST00000302190 GRINAQ7Z429 371 aa12.61□□□□□ -0.39
SDC2-201ENST00000302190 STX12Q86Y82 276 aa12.61□□□□□ -0.39
SDC2-201ENST00000302190 OR52N5Q8NH56 324 aa12.61□□□□□ -0.39
SDC2-201ENST00000302190 HEATR5AQ86XA9 2040 aa12.61□□□□□ -0.39
SDC2-201ENST00000302190 FAM74A7A6NL05 159 aa12.6□□□□□ -0.39
SDC2-201ENST00000302190 LMX1BO60663 402 aa12.6□□□□□ -0.39
SDC2-201ENST00000302190 MED6O75586 246 aa12.6□□□□□ -0.39
SDC2-201ENST00000302190 KLK3P07288 261 aaPredicted RBP12.6□□□□□ -0.39
SDC2-201ENST00000302190 FAM74A3Q4VXF1 159 aa12.6□□□□□ -0.39
SDC2-201ENST00000302190 RAB11FIP2Q7L804 512 aa12.6□□□□□ -0.39
SDC2-201ENST00000302190 TMEM200AQ86VY9 491 aa12.6□□□□□ -0.39
SDC2-201ENST00000302190 ARL11Q969Q4 196 aa12.6□□□□□ -0.39
SDC2-201ENST00000302190 INTS12Q96CB8 462 aaKnown RBP12.6□□□□□ -0.39
SDC2-201ENST00000302190 UBL7Q96S82 380 aaPredicted RBP12.6□□□□□ -0.39
SDC2-201ENST00000302190 NKX6-2Q9C056 277 aaPredicted RBP12.6□□□□□ -0.39
SDC2-201ENST00000302190 OPN4Q9UHM6 478 aa12.6□□□□□ -0.39
SDC2-201ENST00000302190 STMND1H3BQB6 276 aa12.6□□□□□ -0.39
SDC2-201ENST00000302190 TO15178 435 aa12.6□□□□□ -0.39
SDC2-201ENST00000302190 DPP4P27487 766 aa12.6□□□□□ -0.39
SDC2-201ENST00000302190 RSU1Q15404 277 aa12.6□□□□□ -0.39
SDC2-201ENST00000302190 SLC22A18ASQ8N1D0 253 aa12.6□□□□□ -0.39
SDC2-201ENST00000302190 OR52N4Q8NGI2 321 aa12.6□□□□□ -0.39
SDC2-201ENST00000302190 SLC25A21Q9BQT8 299 aaPredicted RBP12.6□□□□□ -0.39
SDC2-201ENST00000302190 DNTTIP1Q9H147 329 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms