RNA–Protein interactions for RNA: ENST00000298396.6

SSX3-201, Transcript of SSX family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSX3, Length 1,232 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3-201ENST00000298396 RNFT2Q96EX2 444 aa5.08□□□□□ -1.6
SSX3-201ENST00000298396 CNN2Q99439 309 aaKnown RBP5.08□□□□□ -1.6
SSX3-201ENST00000298396 ZNF184Q99676 751 aaPredicted RBP5.08□□□□□ -1.6
SSX3-201ENST00000298396 ABHD6Q9BV23 337 aa5.08□□□□□ -1.6
SSX3-201ENST00000298396 TEX12Q9BXU0 123 aa5.08□□□□□ -1.6
SSX3-201ENST00000298396 ANKRD60Q9BZ19 345 aa5.08□□□□□ -1.6
SSX3-201ENST00000298396 PRRG3Q9BZD7 231 aa5.08□□□□□ -1.6
SSX3-201ENST00000298396 CDIP1Q9H305 208 aa5.08□□□□□ -1.6
SSX3-201ENST00000298396 LIME1Q9H400 295 aa5.08□□□□□ -1.6
SSX3-201ENST00000298396 PLEKHF2Q9H8W4 249 aa5.08□□□□□ -1.6
SSX3-201ENST00000298396 CCNB1IP1Q9NPC3 277 aa5.08□□□□□ -1.6
SSX3-201ENST00000298396 DDX28Q9NUL7 540 aaKnown RBP5.08□□□□□ -1.6
SSX3-201ENST00000298396 FKBP14Q9NWM8 211 aa5.08□□□□□ -1.6
SSX3-201ENST00000298396 PAK1IP1Q9NWT1 392 aaPredicted RBP5.08□□□□□ -1.6
SSX3-201ENST00000298396 SLCO1C1Q9NYB5 712 aa5.08□□□□□ -1.6
SSX3-201ENST00000298396 WARS2Q9UGM6 360 aaKnown RBP5.08□□□□□ -1.6
SSX3-201ENST00000298396 FBXL3Q9UKT7 428 aa5.08□□□□□ -1.6
SSX3-201ENST00000298396 EXOGQ9Y2C4 368 aaKnown RBP5.08□□□□□ -1.6
SSX3-201ENST00000298396 MYRFQ9Y2G1 1151 aa5.08□□□□□ -1.6
SSX3-201ENST00000298396 TIMM10BQ9Y5J6 103 aa5.08□□□□□ -1.6
SSX3-201ENST00000298396 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.08□□□□□ -1.6
SSX3-201ENST00000298396 A0A1W2PQL4 384 aaPredicted RBP5.07□□□□□ -1.6
SSX3-201ENST00000298396 C5orf49A4QMS7 147 aa5.07□□□□□ -1.6
SSX3-201ENST00000298396 PSMD9O00233 223 aa5.07□□□□□ -1.6
SSX3-201ENST00000298396 SRSF10O75494 262 aaKnown RBP5.07□□□□□ -1.6
SSX3-201ENST00000298396 NGFP01138 241 aa5.07□□□□□ -1.6
SSX3-201ENST00000298396 CD8AP01732 235 aa5.07□□□□□ -1.6
SSX3-201ENST00000298396 HTR1AP08908 422 aa5.07□□□□□ -1.6
SSX3-201ENST00000298396 ACSM4P0C7M7 580 aa5.07□□□□□ -1.6
SSX3-201ENST00000298396 COX5BP10606 129 aa5.07□□□□□ -1.6
SSX3-201ENST00000298396 ZNF823P16415 610 aa5.07□□□□□ -1.6
SSX3-201ENST00000298396 NR4A1P22736 598 aa5.07□□□□□ -1.6
SSX3-201ENST00000298396 PTAFRP25105 342 aa5.07□□□□□ -1.6
SSX3-201ENST00000298396 ECI1P42126 302 aa5.07□□□□□ -1.6
SSX3-201ENST00000298396 HTR5AP47898 357 aa5.07□□□□□ -1.6
SSX3-201ENST00000298396 MTNR1AP48039 350 aa5.07□□□□□ -1.6
SSX3-201ENST00000298396 BLVRAP53004 296 aa5.07□□□□□ -1.6
SSX3-201ENST00000298396 PCBD1P61457 104 aa5.07□□□□□ -1.6
SSX3-201ENST00000298396 TLE4Q04727 773 aa5.07□□□□□ -1.6
SSX3-201ENST00000298396 SCRN3Q0VDG4 424 aa5.07□□□□□ -1.6
SSX3-201ENST00000298396 ZNF672Q499Z4 452 aaPredicted RBP5.07□□□□□ -1.6
SSX3-201ENST00000298396 LCE3BQ5TA77 95 aa5.07□□□□□ -1.6
SSX3-201ENST00000298396 LCN1P1Q5VSP4 162 aa5.07□□□□□ -1.6
SSX3-201ENST00000298396 MEDAGQ5VYS4 303 aa5.07□□□□□ -1.6
SSX3-201ENST00000298396 KRT80Q6KB66 452 aa5.07□□□□□ -1.6
SSX3-201ENST00000298396 PLEKHG7Q6ZR37 379 aa5.07□□□□□ -1.6
SSX3-201ENST00000298396 COLCA1Q6ZS62 124 aa5.07□□□□□ -1.6
SSX3-201ENST00000298396 DPPA2Q7Z7J5 298 aa5.07□□□□□ -1.6
SSX3-201ENST00000298396 C8orf59Q8N0T1 100 aaPredicted RBP5.07□□□□□ -1.6
SSX3-201ENST00000298396 GJC3Q8NFK1 279 aa5.07□□□□□ -1.6
SSX3-201ENST00000298396 OR10H5Q8NGA6 315 aa5.07□□□□□ -1.6
SSX3-201ENST00000298396 OR52I1Q8NGK6 324 aa5.07□□□□□ -1.6
SSX3-201ENST00000298396 GGHQ92820 318 aa5.07□□□□□ -1.6
SSX3-201ENST00000298396 SLAMF6Q96DU3 332 aa5.07□□□□□ -1.6
SSX3-201ENST00000298396 C14orf79Q96F83 325 aa5.07□□□□□ -1.6
SSX3-201ENST00000298396 SIGLEC11Q96RL6 698 aa5.07□□□□□ -1.6
SSX3-201ENST00000298396 TBX5Q99593 518 aa5.07□□□□□ -1.6
SSX3-201ENST00000298396 COQ7Q99807 217 aa5.07□□□□□ -1.6
SSX3-201ENST00000298396 APOL4Q9BPW4 351 aa5.07□□□□□ -1.6
SSX3-201ENST00000298396 WACQ9BTA9 647 aa5.07□□□□□ -1.6
SSX3-201ENST00000298396 YIPF3Q9GZM5 350 aa5.07□□□□□ -1.6
SSX3-201ENST00000298396 HDHD2Q9H0R4 259 aa5.07□□□□□ -1.6
SSX3-201ENST00000298396 VCXQ9H320 206 aa5.07□□□□□ -1.6
SSX3-201ENST00000298396 VCX3BQ9H321 246 aa5.07□□□□□ -1.6
SSX3-201ENST00000298396 OR51B6Q9H340 312 aa5.07□□□□□ -1.6
SSX3-201ENST00000298396 RNF121Q9H920 327 aa5.07□□□□□ -1.6
SSX3-201ENST00000298396 MRPS18AQ9NVS2 196 aaKnown RBP5.07□□□□□ -1.6
SSX3-201ENST00000298396 CLN6Q9NWW5 311 aa5.07□□□□□ -1.6
SSX3-201ENST00000298396 PLEK2Q9NYT0 353 aa5.07□□□□□ -1.6
SSX3-201ENST00000298396 ZNF319Q9P2F9 582 aa5.07□□□□□ -1.6
SSX3-201ENST00000298396 MYEF2Q9P2K5 600 aaKnown RBP5.07□□□□□ -1.6
SSX3-201ENST00000298396 MRM2Q9UI43 246 aaKnown RBP5.07□□□□□ -1.6
SSX3-201ENST00000298396 ATPIF1Q9UII2 106 aa5.07□□□□□ -1.6
SSX3-201ENST00000298396 RAB26Q9ULW5 256 aa5.07□□□□□ -1.6
SSX3-201ENST00000298396 POLR1DQ9Y2S0 133 aa5.07□□□□□ -1.6
SSX3-201ENST00000298396 RNF115Q9Y4L5 304 aa5.07□□□□□ -1.6
SSX3-201ENST00000298396 LRP12Q9Y561 859 aa5.07□□□□□ -1.6
SSX3-201ENST00000298396 HSPE1-MOB4S4R3N1 261 aa5.07□□□□□ -1.6
SSX3-201ENST00000298396 ACANP16112 2415 aa5.07□□□□□ -1.6
SSX3-201ENST00000298396 ZANQ9Y493 2812 aa5.07□□□□□ -1.6
SSX3-201ENST00000298396 FLNAP21333 2647 aaKnown RBP5.07□□□□□ -1.6
SSX3-201ENST00000298396 ARHGAP32A7KAX9 2087 aa5.06□□□□□ -1.6
SSX3-201ENST00000298396 TMEM129A0AVI4 362 aa5.06□□□□□ -1.6
SSX3-201ENST00000298396 ZNF878C9JN71 531 aa5.06□□□□□ -1.6
SSX3-201ENST00000298396 SLC1A7O00341 560 aa5.06□□□□□ -1.6
SSX3-201ENST00000298396 HS3ST1O14792 307 aa5.06□□□□□ -1.6
SSX3-201ENST00000298396 DENRO43583 198 aaKnown RBP5.06□□□□□ -1.6
SSX3-201ENST00000298396 MPZL2O60487 215 aa5.06□□□□□ -1.6
SSX3-201ENST00000298396 SMPD2O60906 423 aa5.06□□□□□ -1.6
SSX3-201ENST00000298396 GOSR1O95249 250 aa5.06□□□□□ -1.6
SSX3-201ENST00000298396 PNPP00491 289 aa5.06□□□□□ -1.6
SSX3-201ENST00000298396 LYNP07948 512 aa5.06□□□□□ -1.6
SSX3-201ENST00000298396 SOD3P08294 240 aa5.06□□□□□ -1.6
SSX3-201ENST00000298396 DANCRP0C864 163 aa5.06□□□□□ -1.6
SSX3-201ENST00000298396 LIMS3P0CW19 117 aa5.06□□□□□ -1.6
SSX3-201ENST00000298396 LIMS4P0CW20 117 aa5.06□□□□□ -1.6
SSX3-201ENST00000298396 SLC2A1P11166 492 aa5.06□□□□□ -1.6
SSX3-201ENST00000298396 PCSK6P29122 969 aa5.06□□□□□ -1.6
SSX3-201ENST00000298396 THBS4P35443 961 aa5.06□□□□□ -1.6
SSX3-201ENST00000298396 MPV17P39210 176 aa5.06□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms