RNA–Protein interactions for RNA: ENST00000271850.11

TPM3-201, Transcript of tropomyosin 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene TPM3, Length 1,219 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-201ENST00000271850 C7orf34Q96L11 122 aa7.44□□□□□ -1.22
TPM3-201ENST00000271850 DHRS1Q96LJ7 313 aa7.44□□□□□ -1.22
TPM3-201ENST00000271850 MS4A7Q9GZW8 240 aaPredicted RBP7.44□□□□□ -1.22
TPM3-201ENST00000271850 ZMAT3Q9HA38 289 aaKnown RBP7.44□□□□□ -1.22
TPM3-201ENST00000271850 TUBG2Q9NRH3 451 aa7.44□□□□□ -1.22
TPM3-201ENST00000271850 NDUFAF4Q9P032 175 aa7.44□□□□□ -1.22
TPM3-201ENST00000271850 PDP1Q9P0J1 537 aaPredicted RBP7.44□□□□□ -1.22
TPM3-201ENST00000271850 OR5V1Q9UGF6 321 aa7.44□□□□□ -1.22
TPM3-201ENST00000271850 ATPIF1Q9UII2 106 aa7.44□□□□□ -1.22
TPM3-201ENST00000271850 IER3IP1Q9Y5U9 82 aa7.44□□□□□ -1.22
TPM3-201ENST00000271850 ENPP4Q9Y6X5 453 aa7.44□□□□□ -1.22
TPM3-201ENST00000271850 DNAH3Q8TD57 4116 aa7.44□□□□□ -1.22
TPM3-201ENST00000271850 KIR2DS1A0A191URI9 304 aa7.43□□□□□ -1.22
TPM3-201ENST00000271850 A0A1W2PRQ8 180 aa7.43□□□□□ -1.22
TPM3-201ENST00000271850 J3QW42 95 aa7.43□□□□□ -1.22
TPM3-201ENST00000271850 AHCYL1O43865 530 aa7.43□□□□□ -1.22
TPM3-201ENST00000271850 NDUFB2O95178 105 aa7.43□□□□□ -1.22
TPM3-201ENST00000271850 FSTL3O95633 263 aa7.43□□□□□ -1.22
TPM3-201ENST00000271850 SEMG1P04279 462 aa7.43□□□□□ -1.22
TPM3-201ENST00000271850 ACSM4P0C7M7 580 aa7.43□□□□□ -1.22
TPM3-201ENST00000271850 GGT2P36268 569 aa7.43□□□□□ -1.22
TPM3-201ENST00000271850 FGF12P61328 243 aa7.43□□□□□ -1.22
TPM3-201ENST00000271850 ELF3P78545 371 aaPredicted RBP7.43□□□□□ -1.22
TPM3-201ENST00000271850 IL13RA1P78552 427 aa7.43□□□□□ -1.22
TPM3-201ENST00000271850 COX10Q12887 443 aa7.43□□□□□ -1.22
TPM3-201ENST00000271850 DGCR6Q14129 220 aa7.43□□□□□ -1.22
TPM3-201ENST00000271850 GK2Q14410 553 aaPredicted RBP7.43□□□□□ -1.22
TPM3-201ENST00000271850 WDR25Q64LD2 544 aaPredicted RBP7.43□□□□□ -1.22
TPM3-201ENST00000271850 SLC18B1Q6NT16 456 aa7.43□□□□□ -1.22
TPM3-201ENST00000271850 C16orf87Q6PH81 154 aa7.43□□□□□ -1.22
TPM3-201ENST00000271850 LRRN1Q6UXK5 716 aa7.43□□□□□ -1.22
TPM3-201ENST00000271850 RBMS3Q6XE24 437 aaKnown RBP7.43□□□□□ -1.22
TPM3-201ENST00000271850 ZSCAN2Q7Z7L9 614 aaPredicted RBP7.43□□□□□ -1.22
TPM3-201ENST00000271850 LINC00346Q8IVM7 164 aa7.43□□□□□ -1.22
TPM3-201ENST00000271850 FGFRL1Q8N441 504 aa7.43□□□□□ -1.22
TPM3-201ENST00000271850 SLC26A10Q8NG04 563 aa7.43□□□□□ -1.22
TPM3-201ENST00000271850 OR13G1Q8NGZ3 307 aa7.43□□□□□ -1.22
TPM3-201ENST00000271850 Q8TCH9 128 aa7.43□□□□□ -1.22
TPM3-201ENST00000271850 SLC25A28Q96A46 364 aa7.43□□□□□ -1.22
TPM3-201ENST00000271850 APOBEC3DQ96AK3 386 aaPredicted RBP7.43□□□□□ -1.22
TPM3-201ENST00000271850 NEIL1Q96FI4 390 aaPredicted RBP7.43□□□□□ -1.22
TPM3-201ENST00000271850 RSRC1Q96IZ7 334 aaKnown RBP7.43□□□□□ -1.22
TPM3-201ENST00000271850 TBX15Q96SF7 602 aa7.43□□□□□ -1.22
TPM3-201ENST00000271850 COQ7Q99807 217 aa7.43□□□□□ -1.22
TPM3-201ENST00000271850 NUDT16L1Q9BRJ7 211 aaKnown RBP7.43□□□□□ -1.22
TPM3-201ENST00000271850 SLITRK2Q9H156 845 aa7.43□□□□□ -1.22
TPM3-201ENST00000271850 FN3KQ9H479 309 aa7.43□□□□□ -1.22
TPM3-201ENST00000271850 ANKRD19PQ9H560 264 aa7.43□□□□□ -1.22
TPM3-201ENST00000271850 RERGLQ9H628 205 aa7.43□□□□□ -1.22
TPM3-201ENST00000271850 VIPAS39Q9H9C1 493 aa7.43□□□□□ -1.22
TPM3-201ENST00000271850 SMURF1Q9HCE7 757 aa7.43□□□□□ -1.22
TPM3-201ENST00000271850 BRD7Q9NPI1 651 aa7.43□□□□□ -1.22
TPM3-201ENST00000271850 GID8Q9NWU2 228 aa7.43□□□□□ -1.22
TPM3-201ENST00000271850 MRPL22Q9NWU5 206 aaKnown RBP7.43□□□□□ -1.22
TPM3-201ENST00000271850 C1RLQ9NZP8 487 aa7.43□□□□□ -1.22
TPM3-201ENST00000271850 ABCD2Q9UBJ2 740 aa7.43□□□□□ -1.22
TPM3-201ENST00000271850 TMCC3Q9ULS5 477 aa7.43□□□□□ -1.22
TPM3-201ENST00000271850 B9D1Q9UPM9 204 aa7.43□□□□□ -1.22
TPM3-201ENST00000271850 MMP24Q9Y5R2 645 aa7.43□□□□□ -1.22
TPM3-201ENST00000271850 CAPN7Q9Y6W3 813 aa7.43□□□□□ -1.22
TPM3-201ENST00000271850 A0A1B0GW55 424 aa7.42□□□□□ -1.22
TPM3-201ENST00000271850 POM121CA8CG34 1229 aa7.42□□□□□ -1.22
TPM3-201ENST00000271850 SRRM5B3KS81 715 aa7.42□□□□□ -1.22
TPM3-201ENST00000271850 XKRYO14609 159 aa7.42□□□□□ -1.22
TPM3-201ENST00000271850 FAM20BO75063 409 aa7.42□□□□□ -1.22
TPM3-201ENST00000271850 PTBP3O95758 552 aaKnown RBP7.42□□□□□ -1.22
TPM3-201ENST00000271850 DUX4L2P0CJ85 424 aa7.42□□□□□ -1.22
TPM3-201ENST00000271850 DUX4L3P0CJ86 424 aa7.42□□□□□ -1.22
TPM3-201ENST00000271850 DUX4L4P0CJ87 422 aa7.42□□□□□ -1.22
TPM3-201ENST00000271850 DUX4L5P0CJ88 424 aa7.42□□□□□ -1.22
TPM3-201ENST00000271850 DUX4L6P0CJ89 424 aa7.42□□□□□ -1.22
TPM3-201ENST00000271850 DUX4L7P0CJ90 424 aa7.42□□□□□ -1.22
TPM3-201ENST00000271850 HIST1H1CP16403 213 aaKnown RBP7.42□□□□□ -1.22
TPM3-201ENST00000271850 CFHR2P36980 270 aa7.42□□□□□ -1.22
TPM3-201ENST00000271850 CD200P41217 278 aa7.42□□□□□ -1.22
TPM3-201ENST00000271850 RPS27P42677 84 aaKnown RBP7.42□□□□□ -1.22
TPM3-201ENST00000271850 GUCA1AP43080 201 aaPredicted RBP7.42□□□□□ -1.22
TPM3-201ENST00000271850 PITPNBP48739 271 aa7.42□□□□□ -1.22
TPM3-201ENST00000271850 RGS6P49758 472 aa7.42□□□□□ -1.22
TPM3-201ENST00000271850 GNB2P62879 340 aa7.42□□□□□ -1.22
TPM3-201ENST00000271850 MAPRE2Q15555 327 aa7.42□□□□□ -1.22
TPM3-201ENST00000271850 SNAI3Q3KNW1 292 aa7.42□□□□□ -1.22
TPM3-201ENST00000271850 GPR139Q6DWJ6 353 aa7.42□□□□□ -1.22
TPM3-201ENST00000271850 DUX4L9Q6RFH8 374 aaPredicted RBP7.42□□□□□ -1.22
TPM3-201ENST00000271850 Q6YL49 198 aa7.42□□□□□ -1.22
TPM3-201ENST00000271850 DPY19L2P2Q6ZN68 376 aa7.42□□□□□ -1.22
TPM3-201ENST00000271850 SPATC1Q76KD6 591 aa7.42□□□□□ -1.22
TPM3-201ENST00000271850 KIR3DL3Q8N743 410 aa7.42□□□□□ -1.22
TPM3-201ENST00000271850 LZICQ8WZA0 190 aa7.42□□□□□ -1.22
TPM3-201ENST00000271850 MAP6Q96JE9 813 aa7.42□□□□□ -1.22
TPM3-201ENST00000271850 ZNF582Q96NG8 517 aaPredicted RBP7.42□□□□□ -1.22
TPM3-201ENST00000271850 NMNAT3Q96T66 252 aa7.42□□□□□ -1.22
TPM3-201ENST00000271850 DDOQ99489 341 aa7.42□□□□□ -1.22
TPM3-201ENST00000271850 CITED1Q99966 193 aa7.42□□□□□ -1.22
TPM3-201ENST00000271850 CHIAQ9BZP6 476 aa7.42□□□□□ -1.22
TPM3-201ENST00000271850 MARCH7Q9H992 704 aa7.42□□□□□ -1.22
TPM3-201ENST00000271850 TNFRSF19Q9NS68 423 aa7.42□□□□□ -1.22
TPM3-201ENST00000271850 DUX4Q9UBX2 424 aa7.42□□□□□ -1.22
TPM3-201ENST00000271850 MIOXQ9UGB7 285 aa7.42□□□□□ -1.22
TPM3-201ENST00000271850 RPS6KA6Q9UK32 745 aa7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 73.2 ms