RNA–Protein interactions for RNA: ENST00000261556.10

TMEM260-201, Transcript of transmembrane protein 260, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TMEM260, Length 4,264 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-201ENST00000261556 ZNF664Q8N3J9 261 aa11.77□□□□□ -0.52
TMEM260-201ENST00000261556 OR52E1Q8NGJ3 308 aa11.77□□□□□ -0.52
TMEM260-201ENST00000261556 SNIP1Q8TAD8 396 aaKnown RBP11.77□□□□□ -0.52
TMEM260-201ENST00000261556 SOSTQ9BQB4 213 aa11.77□□□□□ -0.52
TMEM260-201ENST00000261556 ALKBH7Q9BT30 221 aaPredicted RBP11.77□□□□□ -0.52
TMEM260-201ENST00000261556 MYNNQ9NPC7 610 aa11.77□□□□□ -0.52
TMEM260-201ENST00000261556 OR5V1Q9UGF6 321 aa11.77□□□□□ -0.52
TMEM260-201ENST00000261556 STEAP1Q9UHE8 339 aa11.77□□□□□ -0.52
TMEM260-201ENST00000261556 PADI1Q9ULC6 663 aa11.77□□□□□ -0.52
TMEM260-201ENST00000261556 SRPX2O60687 465 aaPredicted RBP11.77□□□□□ -0.52
TMEM260-201ENST00000261556 ABLIM3O94929 683 aa11.77□□□□□ -0.52
TMEM260-201ENST00000261556 TLE1Q04724 770 aa11.77□□□□□ -0.52
TMEM260-201ENST00000261556 PPP1R1AQ13522 171 aa11.77□□□□□ -0.52
TMEM260-201ENST00000261556 ARL6IP1Q15041 203 aa11.77□□□□□ -0.52
TMEM260-201ENST00000261556 SHISA6Q6ZSJ9 500 aa11.77□□□□□ -0.52
TMEM260-201ENST00000261556 C19orf47Q8N9M1 422 aaKnown RBP11.77□□□□□ -0.52
TMEM260-201ENST00000261556 OR5L2Q8NGL0 311 aa11.77□□□□□ -0.52
TMEM260-201ENST00000261556 PRRC1Q96M27 445 aa11.77□□□□□ -0.52
TMEM260-201ENST00000261556 LAMB2P55268 1798 aa11.77□□□□□ -0.53
TMEM260-201ENST00000261556 HHLA1C9JL84 531 aa11.77□□□□□ -0.53
TMEM260-201ENST00000261556 CA11O75493 328 aa11.77□□□□□ -0.53
TMEM260-201ENST00000261556 CD38P28907 300 aa11.77□□□□□ -0.53
TMEM260-201ENST00000261556 NPY4RP50391 375 aa11.77□□□□□ -0.53
TMEM260-201ENST00000261556 HNF4GQ14541 408 aa11.77□□□□□ -0.53
TMEM260-201ENST00000261556 OR6X1Q8NH79 312 aa11.77□□□□□ -0.53
TMEM260-201ENST00000261556 TEX101Q9BY14 249 aa11.77□□□□□ -0.53
TMEM260-201ENST00000261556 ULBP3Q9BZM4 244 aa11.77□□□□□ -0.53
TMEM260-201ENST00000261556 PITPNC1Q9UKF7 332 aa11.77□□□□□ -0.53
TMEM260-201ENST00000261556 ENTPD2Q9Y5L3 495 aa11.77□□□□□ -0.53
TMEM260-201ENST00000261556 LNP1A1A4G5 178 aa11.77□□□□□ -0.53
TMEM260-201ENST00000261556 XRCC3O43542 346 aa11.77□□□□□ -0.53
TMEM260-201ENST00000261556 CTNSO60931 367 aa11.77□□□□□ -0.53
TMEM260-201ENST00000261556 TTRP02766 147 aa11.77□□□□□ -0.53
TMEM260-201ENST00000261556 TMIGD3P0DMS9 266 aaPredicted RBP11.77□□□□□ -0.53
TMEM260-201ENST00000261556 HMGA1P17096 107 aaKnown RBP11.77□□□□□ -0.53
TMEM260-201ENST00000261556 TNFSF10P50591 281 aa11.77□□□□□ -0.53
TMEM260-201ENST00000261556 PDX1P52945 283 aa11.77□□□□□ -0.53
TMEM260-201ENST00000261556 WNT3P56703 355 aa11.77□□□□□ -0.53
TMEM260-201ENST00000261556 KRTDAPP60985 99 aa11.77□□□□□ -0.53
TMEM260-201ENST00000261556 ACSM1Q08AH1 577 aa11.77□□□□□ -0.53
TMEM260-201ENST00000261556 PRAMEF20Q5VT98 475 aa11.77□□□□□ -0.53
TMEM260-201ENST00000261556 ANKRD33Q7Z3H0 272 aa11.77□□□□□ -0.53
TMEM260-201ENST00000261556 MMP21Q8N119 569 aa11.77□□□□□ -0.53
TMEM260-201ENST00000261556 ST6GALNAC3Q8NDV1 305 aa11.77□□□□□ -0.53
TMEM260-201ENST00000261556 DIO2Q92813 273 aa11.77□□□□□ -0.53
TMEM260-201ENST00000261556 TMEM106AQ96A25 262 aa11.77□□□□□ -0.53
TMEM260-201ENST00000261556 MRGPRX4Q96LA9 322 aa11.77□□□□□ -0.53
TMEM260-201ENST00000261556 SLC7A7Q9UM01 511 aa11.77□□□□□ -0.53
TMEM260-201ENST00000261556 NTNG1Q9Y2I2 539 aa11.77□□□□□ -0.53
TMEM260-201ENST00000261556 ATRXP46100 2492 aa11.76□□□□□ -0.53
TMEM260-201ENST00000261556 F6UZH7 168 aa11.76□□□□□ -0.53
TMEM260-201ENST00000261556 NSA2O95478 260 aaKnown RBP11.76□□□□□ -0.53
TMEM260-201ENST00000261556 NTN1O95631 604 aa11.76□□□□□ -0.53
TMEM260-201ENST00000261556 GLI4P10075 376 aa11.76□□□□□ -0.53
TMEM260-201ENST00000261556 OTX2P32243 289 aa11.76□□□□□ -0.53
TMEM260-201ENST00000261556 ZNF385BQ569K4 471 aa11.76□□□□□ -0.53
TMEM260-201ENST00000261556 FAM69BQ5VUD6 431 aa11.76□□□□□ -0.53
TMEM260-201ENST00000261556 PTCRAQ6ISU1 281 aaPredicted RBP11.76□□□□□ -0.53
TMEM260-201ENST00000261556 ZNF880Q6PDB4 577 aa11.76□□□□□ -0.53
TMEM260-201ENST00000261556 SLC35F2Q8IXU6 374 aa11.76□□□□□ -0.53
TMEM260-201ENST00000261556 LYSMD1Q96S90 227 aa11.76□□□□□ -0.53
TMEM260-201ENST00000261556 GAL3ST2Q9H3Q3 398 aa11.76□□□□□ -0.53
TMEM260-201ENST00000261556 STARD5Q9NSY2 213 aa11.76□□□□□ -0.53
TMEM260-201ENST00000261556 FAM230AA0A1W2PPH8 454 aa11.76□□□□□ -0.53
TMEM260-201ENST00000261556 LINC00614P0C842 121 aa11.76□□□□□ -0.53
TMEM260-201ENST00000261556 FUT1P19526 365 aa11.76□□□□□ -0.53
TMEM260-201ENST00000261556 UCP3P55916 312 aa11.76□□□□□ -0.53
TMEM260-201ENST00000261556 DLK1P80370 383 aa11.76□□□□□ -0.53
TMEM260-201ENST00000261556 ABCA11PQ4W5N1 156 aa11.76□□□□□ -0.53
TMEM260-201ENST00000261556 PRR27Q6MZM9 219 aa11.76□□□□□ -0.53
TMEM260-201ENST00000261556 FAM83HQ6ZRV2 1179 aaPredicted RBP11.76□□□□□ -0.53
TMEM260-201ENST00000261556 WFDC5Q8TCV5 224 aa11.76□□□□□ -0.53
TMEM260-201ENST00000261556 ZNF430Q9H8G1 570 aaPredicted RBP11.76□□□□□ -0.53
TMEM260-201ENST00000261556 FOXJ3Q9UPW0 622 aa11.76□□□□□ -0.53
TMEM260-201ENST00000261556 DOK2O60496 412 aa11.76□□□□□ -0.53
TMEM260-201ENST00000261556 C1QL1O75973 258 aa11.76□□□□□ -0.53
TMEM260-201ENST00000261556 FOLR2P14207 255 aa11.76□□□□□ -0.53
TMEM260-201ENST00000261556 AOAHP28039 575 aa11.76□□□□□ -0.53
TMEM260-201ENST00000261556 RPL12P30050 165 aaKnown RBP11.76□□□□□ -0.53
TMEM260-201ENST00000261556 ASCL1P50553 236 aa11.76□□□□□ -0.53
TMEM260-201ENST00000261556 FAHD2BQ6P2I3 314 aaPredicted RBP11.76□□□□□ -0.53
TMEM260-201ENST00000261556 Q6ZN92 141 aa11.76□□□□□ -0.53
TMEM260-201ENST00000261556 ZFP62Q8NB50 900 aaPredicted RBP11.76□□□□□ -0.53
TMEM260-201ENST00000261556 OR1L6Q8NGR2 347 aa11.76□□□□□ -0.53
TMEM260-201ENST00000261556 FNDC9Q8TBE3 224 aa11.76□□□□□ -0.53
TMEM260-201ENST00000261556 BPIFA2Q96DR5 249 aa11.76□□□□□ -0.53
TMEM260-201ENST00000261556 SAT2Q96F10 170 aaPredicted RBP11.76□□□□□ -0.53
TMEM260-201ENST00000261556 FAHD2AQ96GK7 314 aa11.76□□□□□ -0.53
TMEM260-201ENST00000261556 ZPBPQ9BS86 351 aa11.76□□□□□ -0.53
TMEM260-201ENST00000261556 TMEM30AQ9NV96 361 aa11.76□□□□□ -0.53
TMEM260-201ENST00000261556 TESQ9UGI8 421 aaKnown RBP11.76□□□□□ -0.53
TMEM260-201ENST00000261556 FFAR1O14842 300 aa11.75□□□□□ -0.53
TMEM260-201ENST00000261556 PSMB5P28074 263 aa11.75□□□□□ -0.53
TMEM260-201ENST00000261556 BIDP55957 195 aa11.75□□□□□ -0.53
TMEM260-201ENST00000261556 MRPS34P82930 218 aaKnown RBP11.75□□□□□ -0.53
TMEM260-201ENST00000261556 VWA2Q5GFL6 755 aa11.75□□□□□ -0.53
TMEM260-201ENST00000261556 LHX8Q68G74 356 aa11.75□□□□□ -0.53
TMEM260-201ENST00000261556 ACOT4Q8N9L9 421 aa11.75□□□□□ -0.53
TMEM260-201ENST00000261556 OR5L1Q8NGL2 311 aa11.75□□□□□ -0.53
TMEM260-201ENST00000261556 ASB11Q8WXH4 323 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms