RNA–Protein interactions for RNA: ENST00000237186.10

UBE3D-201, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 1,879 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-201ENST00000237186 FBXO4Q9UKT5 387 aa14.31□□□□□ -0.12
UBE3D-201ENST00000237186 WIPF3A6NGB9 483 aa14.31□□□□□ -0.12
UBE3D-201ENST00000237186 TSC22D2O75157 780 aa14.31□□□□□ -0.12
UBE3D-201ENST00000237186 GP1BAP07359 652 aa14.31□□□□□ -0.12
UBE3D-201ENST00000237186 ZNF735P0CB33 412 aa14.31□□□□□ -0.12
UBE3D-201ENST00000237186 ZNF17P17021 662 aa14.31□□□□□ -0.12
UBE3D-201ENST00000237186 MPZP25189 248 aa14.31□□□□□ -0.12
UBE3D-201ENST00000237186 MPPED2Q15777 294 aa14.31□□□□□ -0.12
UBE3D-201ENST00000237186 CARD17Q5XLA6 110 aa14.31□□□□□ -0.12
UBE3D-201ENST00000237186 FTMTQ8N4E7 242 aa14.31□□□□□ -0.12
UBE3D-201ENST00000237186 OR8S1Q8NH09 359 aa14.31□□□□□ -0.12
UBE3D-201ENST00000237186 OR51E1Q8TCB6 317 aa14.31□□□□□ -0.12
UBE3D-201ENST00000237186 FAM46BQ96A09 425 aa14.31□□□□□ -0.12
UBE3D-201ENST00000237186 NSG1A0A0A6YYJ2 146 aa14.3□□□□□ -0.12
UBE3D-201ENST00000237186 LINC00862A6NCI5 91 aa14.3□□□□□ -0.12
UBE3D-201ENST00000237186 RER1O15258 196 aa14.3□□□□□ -0.12
UBE3D-201ENST00000237186 RGS11O94810 467 aa14.3□□□□□ -0.12
UBE3D-201ENST00000237186 CYB5AP00167 134 aa14.3□□□□□ -0.12
UBE3D-201ENST00000237186 RLN1P04808 185 aa14.3□□□□□ -0.12
UBE3D-201ENST00000237186 CD63P08962 238 aa14.3□□□□□ -0.12
UBE3D-201ENST00000237186 VSIG8P0DPA2 414 aa14.3□□□□□ -0.12
UBE3D-201ENST00000237186 C4BPBP20851 252 aa14.3□□□□□ -0.12
UBE3D-201ENST00000237186 CLDN17P56750 224 aa14.3□□□□□ -0.12
UBE3D-201ENST00000237186 ZNF121P58317 390 aaPredicted RBP14.3□□□□□ -0.12
UBE3D-201ENST00000237186 GRB2P62993 217 aaKnown RBP14.3□□□□□ -0.12
UBE3D-201ENST00000237186 UNC119Q13432 240 aa14.3□□□□□ -0.12
UBE3D-201ENST00000237186 TAF13Q15543 124 aa14.3□□□□□ -0.12
UBE3D-201ENST00000237186 PGAP1Q75T13 922 aa14.3□□□□□ -0.12
UBE3D-201ENST00000237186 OR2AK2Q8NG84 335 aa14.3□□□□□ -0.12
UBE3D-201ENST00000237186 OR8B12Q8NGG6 310 aa14.3□□□□□ -0.12
UBE3D-201ENST00000237186 OR52B4Q8NGK2 314 aa14.3□□□□□ -0.12
UBE3D-201ENST00000237186 PNPLA2Q96AD5 504 aa14.3□□□□□ -0.12
UBE3D-201ENST00000237186 TMEM41AQ96HV5 264 aa14.3□□□□□ -0.12
UBE3D-201ENST00000237186 GNRHR2Q96P88 292 aa14.3□□□□□ -0.12
UBE3D-201ENST00000237186 CHIAQ9BZP6 476 aa14.3□□□□□ -0.12
UBE3D-201ENST00000237186 CLEC4MQ9H2X3 399 aaPredicted RBP14.3□□□□□ -0.12
UBE3D-201ENST00000237186 SLC39A1Q9NY26 324 aa14.3□□□□□ -0.12
UBE3D-201ENST00000237186 SLC2A8Q9NY64 477 aa14.3□□□□□ -0.12
UBE3D-201ENST00000237186 KIF26BQ2KJY2 2108 aa14.3□□□□□ -0.12
UBE3D-201ENST00000237186 TMEM14DPA8MWL7 114 aa14.29□□□□□ -0.12
UBE3D-201ENST00000237186 ZNF736B4DX44 427 aaPredicted RBP14.29□□□□□ -0.12
UBE3D-201ENST00000237186 CBR3O75828 277 aa14.29□□□□□ -0.12
UBE3D-201ENST00000237186 TOXO94900 526 aa14.29□□□□□ -0.12
UBE3D-201ENST00000237186 MPC2O95563 127 aa14.29□□□□□ -0.12
UBE3D-201ENST00000237186 FOLR3P41439 243 aa14.29□□□□□ -0.12
UBE3D-201ENST00000237186 PRKXP51817 358 aa14.29□□□□□ -0.12
UBE3D-201ENST00000237186 TSPAN5P62079 268 aa14.29□□□□□ -0.12
UBE3D-201ENST00000237186 RAC1P63000 192 aa14.29□□□□□ -0.12
UBE3D-201ENST00000237186 MUC20Q8N307 709 aaPredicted RBP14.29□□□□□ -0.12
UBE3D-201ENST00000237186 OR13C9Q8NGT0 318 aa14.29□□□□□ -0.12
UBE3D-201ENST00000237186 CCDC107Q8WV48 283 aa14.29□□□□□ -0.12
UBE3D-201ENST00000237186 SGCZQ96LD1 299 aa14.29□□□□□ -0.12
UBE3D-201ENST00000237186 NAA11Q9BSU3 229 aaPredicted RBP14.29□□□□□ -0.12
UBE3D-201ENST00000237186 B3GNT4Q9C0J1 378 aa14.29□□□□□ -0.12
UBE3D-201ENST00000237186 EXO5Q9H790 373 aa14.29□□□□□ -0.12
UBE3D-201ENST00000237186 ZNF319Q9P2F9 582 aa14.29□□□□□ -0.12
UBE3D-201ENST00000237186 OPN4Q9UHM6 478 aa14.29□□□□□ -0.12
UBE3D-201ENST00000237186 KLK13Q9UKR3 277 aa14.29□□□□□ -0.12
UBE3D-201ENST00000237186 TEX51A0A1B0GUA7 166 aa14.29□□□□□ -0.12
UBE3D-201ENST00000237186 HMSDA8MTL9 139 aa14.29□□□□□ -0.12
UBE3D-201ENST00000237186 IFNA7P01567 189 aa14.29□□□□□ -0.12
UBE3D-201ENST00000237186 IGLV3-1P01715 115 aa14.29□□□□□ -0.12
UBE3D-201ENST00000237186 ACP1P24666 158 aa14.29□□□□□ -0.12
UBE3D-201ENST00000237186 ZNF93P35789 620 aaPredicted RBP14.29□□□□□ -0.12
UBE3D-201ENST00000237186 CSNK1A1P48729 337 aa14.29□□□□□ -0.12
UBE3D-201ENST00000237186 SUCLG1P53597 346 aaKnown RBP14.29□□□□□ -0.12
UBE3D-201ENST00000237186 CSNK2A1P68400 391 aaPredicted RBP14.29□□□□□ -0.12
UBE3D-201ENST00000237186 HIST1H3AP68431 136 aa14.29□□□□□ -0.12
UBE3D-201ENST00000237186 EIF3IQ13347 325 aaKnown RBP14.29□□□□□ -0.12
UBE3D-201ENST00000237186 MEF2DQ14814 521 aa14.29□□□□□ -0.12
UBE3D-201ENST00000237186 HIST2H3PS2Q5TEC6 136 aa14.29□□□□□ -0.12
UBE3D-201ENST00000237186 IDO2Q6ZQW0 420 aa14.29□□□□□ -0.12
UBE3D-201ENST00000237186 HIST2H3AQ71DI3 136 aa14.29□□□□□ -0.12
UBE3D-201ENST00000237186 DOK3Q7L591 496 aa14.29□□□□□ -0.12
UBE3D-201ENST00000237186 OR2W3Q7Z3T1 314 aa14.29□□□□□ -0.12
UBE3D-201ENST00000237186 GALNT16Q8N428 558 aa14.29□□□□□ -0.12
UBE3D-201ENST00000237186 TMEM156Q8N614 296 aa14.29□□□□□ -0.12
UBE3D-201ENST00000237186 TINAGL1Q9GZM7 467 aaPredicted RBP14.29□□□□□ -0.12
UBE3D-201ENST00000237186 IRF2BPLQ9H1B7 796 aa14.29□□□□□ -0.12
UBE3D-201ENST00000237186 HPF1Q9NWY4 346 aa14.29□□□□□ -0.12
UBE3D-201ENST00000237186 MYEF2Q9P2K5 600 aaKnown RBP14.29□□□□□ -0.12
UBE3D-201ENST00000237186 AUP1Q9Y679 476 aa14.29□□□□□ -0.12
UBE3D-201ENST00000237186 RALGAPA1Q6GYQ0 2036 aa14.28□□□□□ -0.12
UBE3D-201ENST00000237186 H3BUI4 141 aa14.28□□□□□ -0.12
UBE3D-201ENST00000237186 DNPH1O43598 174 aa14.28□□□□□ -0.12
UBE3D-201ENST00000237186 NOS1APO75052 506 aaPredicted RBP14.28□□□□□ -0.12
UBE3D-201ENST00000237186 CHRM2P08172 466 aa14.28□□□□□ -0.12
UBE3D-201ENST00000237186 ZNF20P17024 532 aa14.28□□□□□ -0.12
UBE3D-201ENST00000237186 MSR1P21757 451 aa14.28□□□□□ -0.12
UBE3D-201ENST00000237186 SSTR2P30874 369 aa14.28□□□□□ -0.12
UBE3D-201ENST00000237186 OR3A3P47888 321 aa14.28□□□□□ -0.12
UBE3D-201ENST00000237186 ZMYND11Q15326 602 aa14.28□□□□□ -0.12
UBE3D-201ENST00000237186 GRK1Q15835 563 aa14.28□□□□□ -0.12
UBE3D-201ENST00000237186 CDNFQ49AH0 187 aa14.28□□□□□ -0.12
UBE3D-201ENST00000237186 THOC7Q6I9Y2 204 aaKnown RBP14.28□□□□□ -0.12
UBE3D-201ENST00000237186 DBX2Q6ZNG2 339 aa14.28□□□□□ -0.12
UBE3D-201ENST00000237186 ANGPTL5Q86XS5 388 aa14.28□□□□□ -0.12
UBE3D-201ENST00000237186 OR5AS1Q8N127 324 aa14.28□□□□□ -0.12
UBE3D-201ENST00000237186 TMEM123Q8N131 208 aa14.28□□□□□ -0.12
UBE3D-201ENST00000237186 ACBD4Q8NC06 268 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms