RNA–Protein interactions for RNA: ENST00000640036.1

SCN1A-218, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN1A, Length 8,131 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-218ENST00000640036 HEATR5AQ86XA9 2040 aa4.54□□□□□ -1.68
SCN1A-218ENST00000640036 MEIKINA0A087WXM9 373 aa4.54□□□□□ -1.68
SCN1A-218ENST00000640036 LOC101059948A0A1B0GTJ6 334 aa4.54□□□□□ -1.68
SCN1A-218ENST00000640036 NCR1O76036 304 aa4.54□□□□□ -1.68
SCN1A-218ENST00000640036 T-ENOLP0DO92 83 aa4.54□□□□□ -1.68
SCN1A-218ENST00000640036 CD36P16671 472 aa4.54□□□□□ -1.68
SCN1A-218ENST00000640036 ETV5P41161 510 aa4.54□□□□□ -1.68
SCN1A-218ENST00000640036 CX3CR1P49238 355 aa4.54□□□□□ -1.68
SCN1A-218ENST00000640036 TCTAP57738 103 aa4.54□□□□□ -1.68
SCN1A-218ENST00000640036 PAGE3Q5JUK9 113 aa4.54□□□□□ -1.68
SCN1A-218ENST00000640036 C6orf89Q6UWU4 347 aa4.54□□□□□ -1.68
SCN1A-218ENST00000640036 CYP4V2Q6ZWL3 525 aaPredicted RBP4.54□□□□□ -1.68
SCN1A-218ENST00000640036 SNX29P2Q8IUI4 249 aa4.54□□□□□ -1.68
SCN1A-218ENST00000640036 STK35Q8TDR2 534 aa4.54□□□□□ -1.68
SCN1A-218ENST00000640036 DEDD2Q8WXF8 326 aa4.54□□□□□ -1.68
SCN1A-218ENST00000640036 EMC6Q9BV81 110 aa4.54□□□□□ -1.68
SCN1A-218ENST00000640036 ZNF225Q9UK10 706 aa4.54□□□□□ -1.68
SCN1A-218ENST00000640036 MRPS16Q9Y3D3 137 aaKnown RBP4.54□□□□□ -1.68
SCN1A-218ENST00000640036 QSER1Q2KHR3 1735 aa4.53□□□□□ -1.68
SCN1A-218ENST00000640036 LAMB2P55268 1798 aa4.53□□□□□ -1.68
SCN1A-218ENST00000640036 DLGAP1O14490 977 aa4.53□□□□□ -1.68
SCN1A-218ENST00000640036 P2RX6O15547 441 aa4.53□□□□□ -1.68
SCN1A-218ENST00000640036 SSX5O60225 188 aa4.53□□□□□ -1.68
SCN1A-218ENST00000640036 SNAPINO95295 136 aa4.53□□□□□ -1.68
SCN1A-218ENST00000640036 ANKRD34CP0C6C1 535 aa4.53□□□□□ -1.68
SCN1A-218ENST00000640036 CD96P40200 585 aa4.53□□□□□ -1.68
SCN1A-218ENST00000640036 BLOC1S1P78537 153 aa4.53□□□□□ -1.68
SCN1A-218ENST00000640036 ERHP84090 104 aaKnown RBP4.53□□□□□ -1.68
SCN1A-218ENST00000640036 MEF2DQ14814 521 aa4.53□□□□□ -1.68
SCN1A-218ENST00000640036 ACTBL2Q562R1 376 aa4.53□□□□□ -1.68
SCN1A-218ENST00000640036 BRICD5Q6PL45 260 aa4.53□□□□□ -1.68
SCN1A-218ENST00000640036 MARCH9Q86YJ5 346 aa4.53□□□□□ -1.68
SCN1A-218ENST00000640036 ZNF695Q8IW36 515 aa4.53□□□□□ -1.68
SCN1A-218ENST00000640036 PQLC1Q8N2U9 271 aa4.53□□□□□ -1.68
SCN1A-218ENST00000640036 C1orf162Q8NEQ5 155 aaPredicted RBP4.53□□□□□ -1.68
SCN1A-218ENST00000640036 NEU4Q8WWR8 484 aaPredicted RBP4.53□□□□□ -1.68
SCN1A-218ENST00000640036 EDARADDQ8WWZ3 215 aa4.53□□□□□ -1.68
SCN1A-218ENST00000640036 SLCO2A1Q92959 643 aa4.53□□□□□ -1.68
SCN1A-218ENST00000640036 KCNJ15Q99712 375 aa4.53□□□□□ -1.68
SCN1A-218ENST00000640036 REPIN1Q9BWE0 567 aaKnown RBP4.53□□□□□ -1.68
SCN1A-218ENST00000640036 ANKRD19PQ9H560 264 aa4.53□□□□□ -1.68
SCN1A-218ENST00000640036 HINT3Q9NQE9 182 aaKnown RBP4.53□□□□□ -1.68
SCN1A-218ENST00000640036 PTTG2Q9NZH5 202 aa4.53□□□□□ -1.68
SCN1A-218ENST00000640036 H3BMQ9 156 aa4.53□□□□□ -1.68
SCN1A-218ENST00000640036 PRKRAO75569 313 aaKnown RBP4.53□□□□□ -1.68
SCN1A-218ENST00000640036 CD14P08571 375 aa4.53□□□□□ -1.68
SCN1A-218ENST00000640036 FXYD4P59646 89 aa4.53□□□□□ -1.68
SCN1A-218ENST00000640036 PRTGQ2VWP7 1150 aa4.53□□□□□ -1.68
SCN1A-218ENST00000640036 C20orf204Q6ZNR8 217 aa4.53□□□□□ -1.68
SCN1A-218ENST00000640036 BMPERQ8N8U9 685 aa4.53□□□□□ -1.68
SCN1A-218ENST00000640036 OR4S1Q8NGB4 309 aa4.53□□□□□ -1.68
SCN1A-218ENST00000640036 OR4C13Q8NGP0 309 aa4.53□□□□□ -1.68
SCN1A-218ENST00000640036 CMTM2Q8TAZ6 248 aa4.53□□□□□ -1.68
SCN1A-218ENST00000640036 FNDC9Q8TBE3 224 aa4.53□□□□□ -1.68
SCN1A-218ENST00000640036 SLC25A28Q96A46 364 aa4.53□□□□□ -1.68
SCN1A-218ENST00000640036 RASL10BQ96S79 203 aa4.53□□□□□ -1.68
SCN1A-218ENST00000640036 EXO1Q9UQ84 846 aaKnown RBP4.53□□□□□ -1.68
SCN1A-218ENST00000640036 ASB4Q9Y574 426 aa4.53□□□□□ -1.68
SCN1A-218ENST00000640036 PCDHGA9Q9Y5G4 932 aaKnown RBP4.53□□□□□ -1.68
SCN1A-218ENST00000640036 NAP1L6A6NFF2 107 aa4.53□□□□□ -1.68
SCN1A-218ENST00000640036 AQP12BA6NM10 295 aa4.53□□□□□ -1.68
SCN1A-218ENST00000640036 SERPINA2P20848 420 aa4.53□□□□□ -1.68
SCN1A-218ENST00000640036 DTYMKP23919 212 aa4.53□□□□□ -1.68
SCN1A-218ENST00000640036 BTN1A1Q13410 526 aa4.53□□□□□ -1.68
SCN1A-218ENST00000640036 SSX2Q16385 188 aa4.53□□□□□ -1.68
SCN1A-218ENST00000640036 ZNF787Q6DD87 383 aa4.53□□□□□ -1.68
SCN1A-218ENST00000640036 LETMD1Q6P1Q0 360 aa4.53□□□□□ -1.68
SCN1A-218ENST00000640036 CLEC9AQ6UXN8 241 aa4.53□□□□□ -1.68
SCN1A-218ENST00000640036 OR4K5Q8NGD3 323 aa4.53□□□□□ -1.68
SCN1A-218ENST00000640036 OR51L1Q8NGJ5 315 aa4.53□□□□□ -1.68
SCN1A-218ENST00000640036 OR51F2Q8NH61 342 aa4.53□□□□□ -1.68
SCN1A-218ENST00000640036 ADAMTS16Q8TE57 1224 aa4.53□□□□□ -1.68
SCN1A-218ENST00000640036 ALKBH3Q96Q83 286 aaPredicted RBP4.53□□□□□ -1.68
SCN1A-218ENST00000640036 ARPC5LQ9BPX5 153 aa4.53□□□□□ -1.68
SCN1A-218ENST00000640036 C19orf53Q9UNZ5 99 aaPredicted RBP4.53□□□□□ -1.68
SCN1A-218ENST00000640036 MYO16Q9Y6X6 1858 aa4.53□□□□□ -1.68
SCN1A-218ENST00000640036 LOC100509620A0A075B734 347 aa4.53□□□□□ -1.68
SCN1A-218ENST00000640036 CD300LBA8K4G0 201 aa4.53□□□□□ -1.68
SCN1A-218ENST00000640036 M0R082 166 aa4.53□□□□□ -1.68
SCN1A-218ENST00000640036 TMPRSS2O15393 492 aa4.53□□□□□ -1.68
SCN1A-218ENST00000640036 EDIL3O43854 480 aa4.53□□□□□ -1.68
SCN1A-218ENST00000640036 FZD6O60353 706 aa4.53□□□□□ -1.68
SCN1A-218ENST00000640036 HACD4Q5VWC8 232 aa4.53□□□□□ -1.68
SCN1A-218ENST00000640036 LPCAT3Q6P1A2 487 aa4.53□□□□□ -1.68
SCN1A-218ENST00000640036 PLBD1Q6P4A8 553 aa4.53□□□□□ -1.68
SCN1A-218ENST00000640036 ADGRG3Q86Y34 549 aa4.53□□□□□ -1.68
SCN1A-218ENST00000640036 C15orf54Q8N8G6 183 aa4.53□□□□□ -1.68
SCN1A-218ENST00000640036 OR10AD1Q8NGE0 317 aa4.53□□□□□ -1.68
SCN1A-218ENST00000640036 NT5CQ8TCD5 201 aa4.53□□□□□ -1.68
SCN1A-218ENST00000640036 TMPRSS5Q9H3S3 457 aa4.53□□□□□ -1.68
SCN1A-218ENST00000640036 ENPP4Q9Y6X5 453 aa4.53□□□□□ -1.68
SCN1A-218ENST00000640036 TECTAO75443 2155 aa4.53□□□□□ -1.68
SCN1A-218ENST00000640036 SHANK1Q9Y566 2161 aa4.53□□□□□ -1.68
SCN1A-218ENST00000640036 YLPM1P49750 1951 aaKnown RBP4.53□□□□□ -1.68
SCN1A-218ENST00000640036 RREB1Q92766 1687 aa4.53□□□□□ -1.68
SCN1A-218ENST00000640036 WNK3Q9BYP7 1800 aa4.53□□□□□ -1.68
SCN1A-218ENST00000640036 LCMT2O60294 686 aaKnown RBP4.53□□□□□ -1.68
SCN1A-218ENST00000640036 CD59P13987 128 aa4.53□□□□□ -1.68
SCN1A-218ENST00000640036 PDLIM3Q53GG5 364 aaPredicted RBP4.53□□□□□ -1.68
SCN1A-218ENST00000640036 ENTPD8Q5MY95 495 aa4.53□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms