RNA–Protein interactions for RNA: ENST00000618227.1

MALAT1-213, metastasis associated lung adenocarcinoma transcript 1, humanhuman

TSL 3 BASIC

Gene MALAT1, Length 593 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MALAT1-213ENST00000618227 GABARAPL2P60520 117 aa13.66□□□□□ -0.22
MALAT1-213ENST00000618227 RPS23P62266 143 aaKnown RBP13.66□□□□□ -0.22
MALAT1-213ENST00000618227 NKX6-1P78426 367 aaPredicted RBP13.66□□□□□ -0.22
MALAT1-213ENST00000618227 STX19Q8N4C7 294 aa13.66□□□□□ -0.22
MALAT1-213ENST00000618227 SMAP2Q8WU79 429 aaPredicted RBP13.66□□□□□ -0.22
MALAT1-213ENST00000618227 APOBEC3DQ96AK3 386 aaPredicted RBP13.66□□□□□ -0.22
MALAT1-213ENST00000618227 PIK3IP1Q96FE7 263 aa13.66□□□□□ -0.22
MALAT1-213ENST00000618227 ZNF799Q96GE5 643 aa13.66□□□□□ -0.22
MALAT1-213ENST00000618227 SIGLEC11Q96RL6 698 aa13.66□□□□□ -0.22
MALAT1-213ENST00000618227 ZNF442Q9H7R0 627 aa13.66□□□□□ -0.22
MALAT1-213ENST00000618227 MRM2Q9UI43 246 aaKnown RBP13.66□□□□□ -0.22
MALAT1-213ENST00000618227 LRP12Q9Y561 859 aa13.66□□□□□ -0.22
MALAT1-213ENST00000618227 GCN1Q92616 2671 aaKnown RBP13.66□□□□□ -0.22
MALAT1-213ENST00000618227 TRIM64A6NGJ6 449 aa13.65□□□□□ -0.22
MALAT1-213ENST00000618227 SHISA9B4DS77 424 aa13.65□□□□□ -0.22
MALAT1-213ENST00000618227 F5H5K5 113 aa13.65□□□□□ -0.22
MALAT1-213ENST00000618227 LIMS3P0CW19 117 aa13.65□□□□□ -0.22
MALAT1-213ENST00000618227 LIMS4P0CW20 117 aa13.65□□□□□ -0.22
MALAT1-213ENST00000618227 SSTR2P30874 369 aa13.65□□□□□ -0.22
MALAT1-213ENST00000618227 GLRXP35754 106 aa13.65□□□□□ -0.22
MALAT1-213ENST00000618227 PSMA6P60900 246 aaKnown RBP13.65□□□□□ -0.22
MALAT1-213ENST00000618227 TLE4Q04727 773 aa13.65□□□□□ -0.22
MALAT1-213ENST00000618227 HGFACQ04756 655 aa13.65□□□□□ -0.22
MALAT1-213ENST00000618227 ZNF829Q3KNS6 432 aaPredicted RBP13.65□□□□□ -0.22
MALAT1-213ENST00000618227 FDX2Q6P4F2 183 aa13.65□□□□□ -0.22
MALAT1-213ENST00000618227 SLC22A25Q6T423 547 aa13.65□□□□□ -0.22
MALAT1-213ENST00000618227 LRRN1Q6UXK5 716 aa13.65□□□□□ -0.22
MALAT1-213ENST00000618227 TMPRSS11AQ6ZMR5 421 aa13.65□□□□□ -0.22
MALAT1-213ENST00000618227 AHSA2Q719I0 299 aa13.65□□□□□ -0.22
MALAT1-213ENST00000618227 SSX6Q7RTT6 188 aa13.65□□□□□ -0.22
MALAT1-213ENST00000618227 PRSS48Q7RTY5 328 aa13.65□□□□□ -0.22
MALAT1-213ENST00000618227 OR52H1Q8NGJ2 320 aa13.65□□□□□ -0.22
MALAT1-213ENST00000618227 OR5L1Q8NGL2 311 aa13.65□□□□□ -0.22
MALAT1-213ENST00000618227 OR52N1Q8NH53 320 aa13.65□□□□□ -0.22
MALAT1-213ENST00000618227 DOK1Q99704 481 aa13.65□□□□□ -0.22
MALAT1-213ENST00000618227 ALG8Q9BVK2 526 aa13.65□□□□□ -0.22
MALAT1-213ENST00000618227 MOB1AQ9H8S9 216 aa13.65□□□□□ -0.22
MALAT1-213ENST00000618227 IKZF2Q9UKS7 526 aa13.65□□□□□ -0.22
MALAT1-213ENST00000618227 COL12A1Q99715 3063 aa13.64□□□□□ -0.23
MALAT1-213ENST00000618227 ICE1Q9Y2F5 2266 aa13.64□□□□□ -0.23
MALAT1-213ENST00000618227 TMEM129A0AVI4 362 aa13.64□□□□□ -0.23
MALAT1-213ENST00000618227 PRR32B1ATL7 298 aa13.64□□□□□ -0.23
MALAT1-213ENST00000618227 PTGES3LE9PB15 166 aa13.64□□□□□ -0.23
MALAT1-213ENST00000618227 ATP6V1G2-DDX39BF2Z307 99 aa13.64□□□□□ -0.23
MALAT1-213ENST00000618227 RGS10O43665 173 aa13.64□□□□□ -0.23
MALAT1-213ENST00000618227 DBHP09172 617 aa13.64□□□□□ -0.23
MALAT1-213ENST00000618227 WNT5AP41221 380 aa13.64□□□□□ -0.23
MALAT1-213ENST00000618227 KCTD21Q4G0X4 260 aa13.64□□□□□ -0.23
MALAT1-213ENST00000618227 ZNF704Q6ZNC4 412 aaPredicted RBP13.64□□□□□ -0.23
MALAT1-213ENST00000618227 PRSS45Q7RTY3 260 aa13.64□□□□□ -0.23
MALAT1-213ENST00000618227 FAM220AQ7Z4H9 259 aa13.64□□□□□ -0.23
MALAT1-213ENST00000618227 LHFPL3Q86UP9 236 aa13.64□□□□□ -0.23
MALAT1-213ENST00000618227 ZNF295-AS1Q8N0V1 137 aa13.64□□□□□ -0.23
MALAT1-213ENST00000618227 PAQR4Q8N4S7 273 aaPredicted RBP13.64□□□□□ -0.23
MALAT1-213ENST00000618227 SLC7A6Q92536 515 aa13.64□□□□□ -0.23
MALAT1-213ENST00000618227 TBX5Q99593 518 aa13.64□□□□□ -0.23
MALAT1-213ENST00000618227 ZNF391Q9UJN7 358 aa13.64□□□□□ -0.23
MALAT1-213ENST00000618227 ERGIC3Q9Y282 383 aa13.64□□□□□ -0.23
MALAT1-213ENST00000618227 GRIP1Q9Y3R0 1128 aa13.64□□□□□ -0.23
MALAT1-213ENST00000618227 SMPD2O60906 423 aa13.63□□□□□ -0.23
MALAT1-213ENST00000618227 SRSF10O75494 262 aaKnown RBP13.63□□□□□ -0.23
MALAT1-213ENST00000618227 MT-ND5P03915 603 aa13.63□□□□□ -0.23
MALAT1-213ENST00000618227 RPSAP08865 295 aaKnown RBP13.63□□□□□ -0.23
MALAT1-213ENST00000618227 CCL2P13500 99 aa13.63□□□□□ -0.23
MALAT1-213ENST00000618227 CCNOP22674 350 aa13.63□□□□□ -0.23
MALAT1-213ENST00000618227 CX3CR1P49238 355 aa13.63□□□□□ -0.23
MALAT1-213ENST00000618227 ETV1P50549 477 aa13.63□□□□□ -0.23
MALAT1-213ENST00000618227 IRF3Q14653 427 aa13.63□□□□□ -0.23
MALAT1-213ENST00000618227 ZNF672Q499Z4 452 aaPredicted RBP13.63□□□□□ -0.23
MALAT1-213ENST00000618227 LIPNQ5VXI9 398 aa13.63□□□□□ -0.23
MALAT1-213ENST00000618227 ZNF544Q6NX49 715 aa13.63□□□□□ -0.23
MALAT1-213ENST00000618227 SPATC1Q76KD6 591 aa13.63□□□□□ -0.23
MALAT1-213ENST00000618227 KLHL36Q8N4N3 616 aa13.63□□□□□ -0.23
MALAT1-213ENST00000618227 RFLNBQ8N5W9 214 aa13.63□□□□□ -0.23
MALAT1-213ENST00000618227 ZNF283Q8N7M2 679 aa13.63□□□□□ -0.23
MALAT1-213ENST00000618227 HS3ST6Q96QI5 342 aa13.63□□□□□ -0.23
MALAT1-213ENST00000618227 RHNO1Q9BSD3 238 aa13.63□□□□□ -0.23
MALAT1-213ENST00000618227 RGCCQ9H4X1 137 aa13.63□□□□□ -0.23
MALAT1-213ENST00000618227 OPA3Q9H6K4 179 aa13.63□□□□□ -0.23
MALAT1-213ENST00000618227 PAK1IP1Q9NWT1 392 aaPredicted RBP13.63□□□□□ -0.23
MALAT1-213ENST00000618227 R4GMQ9 66 aa13.63□□□□□ -0.23
MALAT1-213ENST00000618227 PRR14LQ5THK1 2151 aa13.63□□□□□ -0.23
MALAT1-213ENST00000618227 TMEM269A0A1B0GVZ9 245 aa13.62□□□□□ -0.23
MALAT1-213ENST00000618227 LCATP04180 440 aa13.62□□□□□ -0.23
MALAT1-213ENST00000618227 CFL1P23528 166 aaKnown RBP13.62□□□□□ -0.23
MALAT1-213ENST00000618227 C21orf33P30042 268 aaPredicted RBP13.62□□□□□ -0.23
MALAT1-213ENST00000618227 TGM4P49221 684 aa13.62□□□□□ -0.23
MALAT1-213ENST00000618227 EVX1P49640 407 aa13.62□□□□□ -0.23
MALAT1-213ENST00000618227 CCR9P51686 369 aa13.62□□□□□ -0.23
MALAT1-213ENST00000618227 PRKXP51817 358 aa13.62□□□□□ -0.23
MALAT1-213ENST00000618227 CHN2P52757 468 aa13.62□□□□□ -0.23
MALAT1-213ENST00000618227 ZNF121P58317 390 aaPredicted RBP13.62□□□□□ -0.23
MALAT1-213ENST00000618227 CCDC58Q4VC31 144 aa13.62□□□□□ -0.23
MALAT1-213ENST00000618227 ZNF101Q8IZC7 436 aa13.62□□□□□ -0.23
MALAT1-213ENST00000618227 NANOGP1Q8N7R0 232 aa13.62□□□□□ -0.23
MALAT1-213ENST00000618227 YIPF7Q8N8F6 280 aa13.62□□□□□ -0.23
MALAT1-213ENST00000618227 ZNF485Q8NCK3 441 aa13.62□□□□□ -0.23
MALAT1-213ENST00000618227 LILRB1Q8NHL6 650 aaPredicted RBP13.62□□□□□ -0.23
MALAT1-213ENST00000618227 TMEM171Q8WVE6 324 aa13.62□□□□□ -0.23
MALAT1-213ENST00000618227 NR1H4Q96RI1 486 aaPredicted RBP13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms