RNA–Protein interactions for RNA: ENST00000608461.1

HDDC2-206, Transcript of HD domain containing 2, humanhuman

TSL 2

Gene HDDC2, Length 587 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-206ENST00000608461 HEXAP06865 529 aa12.19□□□□□ -0.46
HDDC2-206ENST00000608461 SPARCP09486 303 aa12.19□□□□□ -0.46
HDDC2-206ENST00000608461 NAT2P11245 290 aa12.19□□□□□ -0.46
HDDC2-206ENST00000608461 SELEP16581 610 aa12.19□□□□□ -0.46
HDDC2-206ENST00000608461 ACHEP22303 614 aa12.19□□□□□ -0.46
HDDC2-206ENST00000608461 SLC2A5P22732 501 aa12.19□□□□□ -0.46
HDDC2-206ENST00000608461 MPV17P39210 176 aa12.19□□□□□ -0.46
HDDC2-206ENST00000608461 ZNF81P51508 661 aa12.19□□□□□ -0.46
HDDC2-206ENST00000608461 TMEM33P57088 247 aa12.19□□□□□ -0.46
HDDC2-206ENST00000608461 GRB2P62993 217 aaKnown RBP12.19□□□□□ -0.46
HDDC2-206ENST00000608461 EFNB1P98172 346 aa12.19□□□□□ -0.46
HDDC2-206ENST00000608461 MALLQ13021 153 aa12.19□□□□□ -0.46
HDDC2-206ENST00000608461 PSG7Q13046 419 aa12.19□□□□□ -0.46
HDDC2-206ENST00000608461 MAD2L1BPQ15013 274 aaPredicted RBP12.19□□□□□ -0.46
HDDC2-206ENST00000608461 CLEC9AQ6UXN8 241 aa12.19□□□□□ -0.46
HDDC2-206ENST00000608461 TIGD4Q8IY51 512 aa12.19□□□□□ -0.46
HDDC2-206ENST00000608461 OR10S1Q8NGN2 331 aa12.19□□□□□ -0.46
HDDC2-206ENST00000608461 SLAMF6Q96DU3 332 aa12.19□□□□□ -0.46
HDDC2-206ENST00000608461 ZNF799Q96GE5 643 aa12.19□□□□□ -0.46
HDDC2-206ENST00000608461 KCNJ15Q99712 375 aa12.19□□□□□ -0.46
HDDC2-206ENST00000608461 CIB1Q99828 191 aa12.19□□□□□ -0.46
HDDC2-206ENST00000608461 PKP2Q99959 881 aa12.19□□□□□ -0.46
HDDC2-206ENST00000608461 GABARAPL3Q9BY60 117 aa12.19□□□□□ -0.46
HDDC2-206ENST00000608461 EGLN1Q9GZT9 426 aa12.19□□□□□ -0.46
HDDC2-206ENST00000608461 TPK1Q9H3S4 243 aa12.19□□□□□ -0.46
HDDC2-206ENST00000608461 SP140LQ9H930 580 aa12.19□□□□□ -0.46
HDDC2-206ENST00000608461 MED20Q9H944 212 aa12.19□□□□□ -0.46
HDDC2-206ENST00000608461 CHODLQ9H9P2 273 aa12.19□□□□□ -0.46
HDDC2-206ENST00000608461 USE1Q9NZ43 259 aa12.19□□□□□ -0.46
HDDC2-206ENST00000608461 PURGQ9UJV8 347 aaKnown RBP12.19□□□□□ -0.46
HDDC2-206ENST00000608461 ORC6Q9Y5N6 252 aa12.19□□□□□ -0.46
HDDC2-206ENST00000608461 A0A096LNT2 108 aa12.18□□□□□ -0.46
HDDC2-206ENST00000608461 SMAD7O15105 426 aaKnown RBP12.18□□□□□ -0.46
HDDC2-206ENST00000608461 TIMM8AO60220 97 aaPredicted RBP12.18□□□□□ -0.46
HDDC2-206ENST00000608461 CD55P08174 381 aa12.18□□□□□ -0.46
HDDC2-206ENST00000608461 USF1P22415 310 aaPredicted RBP12.18□□□□□ -0.46
HDDC2-206ENST00000608461 CRYBB2P43320 205 aa12.18□□□□□ -0.46
HDDC2-206ENST00000608461 NR4A2P43354 598 aa12.18□□□□□ -0.46
HDDC2-206ENST00000608461 RAD23AP54725 363 aa12.18□□□□□ -0.46
HDDC2-206ENST00000608461 DBPQ10586 325 aaPredicted RBP12.18□□□□□ -0.46
HDDC2-206ENST00000608461 RIN1Q13671 783 aa12.18□□□□□ -0.46
HDDC2-206ENST00000608461 TAF13Q15543 124 aa12.18□□□□□ -0.46
HDDC2-206ENST00000608461 KLHL12Q53G59 568 aa12.18□□□□□ -0.46
HDDC2-206ENST00000608461 LCN1P1Q5VSP4 162 aa12.18□□□□□ -0.46
HDDC2-206ENST00000608461 NXNL2Q5VZ03 156 aa12.18□□□□□ -0.46
HDDC2-206ENST00000608461 C12orf73Q69YU5 71 aa12.18□□□□□ -0.46
HDDC2-206ENST00000608461 LYPD4Q6UWN0 246 aa12.18□□□□□ -0.46
HDDC2-206ENST00000608461 DPY19L4Q7Z388 723 aa12.18□□□□□ -0.46
HDDC2-206ENST00000608461 ERI1Q8IV48 349 aaKnown RBP12.18□□□□□ -0.46
HDDC2-206ENST00000608461 OR6N2Q8NGY6 317 aa12.18□□□□□ -0.46
HDDC2-206ENST00000608461 OTOSQ8NHW6 89 aa12.18□□□□□ -0.46
HDDC2-206ENST00000608461 RNF133Q8WVZ7 376 aa12.18□□□□□ -0.46
HDDC2-206ENST00000608461 CMBLQ96DG6 245 aa12.18□□□□□ -0.46
HDDC2-206ENST00000608461 TEAD3Q99594 435 aa12.18□□□□□ -0.46
HDDC2-206ENST00000608461 COPS4Q9BT78 406 aa12.18□□□□□ -0.46
HDDC2-206ENST00000608461 OPA3Q9H6K4 179 aa12.18□□□□□ -0.46
HDDC2-206ENST00000608461 S100A14Q9HCY8 104 aa12.18□□□□□ -0.46
HDDC2-206ENST00000608461 DECR2Q9NUI1 292 aa12.18□□□□□ -0.46
HDDC2-206ENST00000608461 H2AFY2Q9P0M6 372 aaPredicted RBP12.18□□□□□ -0.46
HDDC2-206ENST00000608461 SLC22A31A6NKX4 558 aa12.17□□□□□ -0.46
HDDC2-206ENST00000608461 MITFO75030 526 aaPredicted RBP12.17□□□□□ -0.46
HDDC2-206ENST00000608461 HPXP02790 462 aa12.17□□□□□ -0.46
HDDC2-206ENST00000608461 LCATP04180 440 aa12.17□□□□□ -0.46
HDDC2-206ENST00000608461 ALPLP05186 524 aa12.17□□□□□ -0.46
HDDC2-206ENST00000608461 TNFSF4P23510 183 aa12.17□□□□□ -0.46
HDDC2-206ENST00000608461 RPS27P42677 84 aaKnown RBP12.17□□□□□ -0.46
HDDC2-206ENST00000608461 ALDH3A2P51648 485 aa12.17□□□□□ -0.46
HDDC2-206ENST00000608461 CDK5R2Q13319 367 aa12.17□□□□□ -0.46
HDDC2-206ENST00000608461 EIF2B1Q14232 305 aaKnown RBP12.17□□□□□ -0.46
HDDC2-206ENST00000608461 TMEM163Q8TC26 289 aa12.17□□□□□ -0.46
HDDC2-206ENST00000608461 TRUB1Q8WWH5 349 aaKnown RBP12.17□□□□□ -0.46
HDDC2-206ENST00000608461 ZMYND19Q96E35 227 aaPredicted RBP12.17□□□□□ -0.46
HDDC2-206ENST00000608461 C9orf16Q9BUW7 83 aa12.17□□□□□ -0.46
HDDC2-206ENST00000608461 ABHD6Q9BV23 337 aa12.17□□□□□ -0.46
HDDC2-206ENST00000608461 YIPF3Q9GZM5 350 aa12.17□□□□□ -0.46
HDDC2-206ENST00000608461 NIPAL2Q9H841 368 aa12.17□□□□□ -0.46
HDDC2-206ENST00000608461 CENPMQ9NSP4 180 aa12.17□□□□□ -0.46
HDDC2-206ENST00000608461 TMEM14AQ9Y6G1 99 aa12.17□□□□□ -0.46
HDDC2-206ENST00000608461 ZANQ9Y493 2812 aa12.16□□□□□ -0.46
HDDC2-206ENST00000608461 SAC3D1A6NKF1 404 aa12.16□□□□□ -0.46
HDDC2-206ENST00000608461 TLX2O43763 284 aaPredicted RBP12.16□□□□□ -0.46
HDDC2-206ENST00000608461 LY6G6DO95868 133 aa12.16□□□□□ -0.46
HDDC2-206ENST00000608461 IGHV1-46P01743 117 aa12.16□□□□□ -0.46
HDDC2-206ENST00000608461 LYNP07948 512 aa12.16□□□□□ -0.46
HDDC2-206ENST00000608461 TACSTD2P09758 323 aa12.16□□□□□ -0.46
HDDC2-206ENST00000608461 TNFRSF1AP19438 455 aa12.16□□□□□ -0.46
HDDC2-206ENST00000608461 HSD11B1P28845 292 aa12.16□□□□□ -0.46
HDDC2-206ENST00000608461 MAGEB1P43366 347 aa12.16□□□□□ -0.46
HDDC2-206ENST00000608461 SLC6A9P48067 706 aa12.16□□□□□ -0.46
HDDC2-206ENST00000608461 RPS7P62081 194 aaKnown RBP12.16□□□□□ -0.46
HDDC2-206ENST00000608461 CCL8P80075 99 aa12.16□□□□□ -0.46
HDDC2-206ENST00000608461 APOFQ13790 326 aa12.16□□□□□ -0.46
HDDC2-206ENST00000608461 GGTLC2Q14390 218 aa12.16□□□□□ -0.46
HDDC2-206ENST00000608461 CARTPTQ16568 116 aa12.16□□□□□ -0.46
HDDC2-206ENST00000608461 ALKBH6Q3KRA9 238 aa12.16□□□□□ -0.46
HDDC2-206ENST00000608461 DEGS2Q6QHC5 323 aa12.16□□□□□ -0.46
HDDC2-206ENST00000608461 SLC16A9Q7RTY1 509 aa12.16□□□□□ -0.46
HDDC2-206ENST00000608461 GID4Q8IVV7 300 aa12.16□□□□□ -0.46
HDDC2-206ENST00000608461 PQLC1Q8N2U9 271 aa12.16□□□□□ -0.46
HDDC2-206ENST00000608461 OR8G5Q8NG78 346 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms