RNA–Protein interactions for RNA: ENST00000586892.1

SMARCA4-210, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 4

Gene SMARCA4, Length 559 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-210ENST00000586892 TMEM249Q2WGJ8 235 aa11.34□□□□□ -0.59
SMARCA4-210ENST00000586892 TMEM255AQ5JRV8 349 aa11.34□□□□□ -0.59
SMARCA4-210ENST00000586892 KDM4DQ6B0I6 523 aa11.34□□□□□ -0.59
SMARCA4-210ENST00000586892 FBXW12Q6X9E4 464 aa11.34□□□□□ -0.59
SMARCA4-210ENST00000586892 COLCA1Q6ZS62 124 aa11.34□□□□□ -0.59
SMARCA4-210ENST00000586892 DCXRQ7Z4W1 244 aa11.34□□□□□ -0.59
SMARCA4-210ENST00000586892 AMIGO2Q86SJ2 522 aa11.34□□□□□ -0.59
SMARCA4-210ENST00000586892 C10orf67Q8IYJ2 551 aa11.34□□□□□ -0.59
SMARCA4-210ENST00000586892 SPTSSAQ969W0 71 aa11.34□□□□□ -0.59
SMARCA4-210ENST00000586892 DIRC2Q96SL1 478 aa11.34□□□□□ -0.59
SMARCA4-210ENST00000586892 C1QTNF5Q9BXJ0 243 aa11.34□□□□□ -0.59
SMARCA4-210ENST00000586892 PRRG3Q9BZD7 231 aa11.34□□□□□ -0.59
SMARCA4-210ENST00000586892 POFUT1Q9H488 388 aa11.34□□□□□ -0.59
SMARCA4-210ENST00000586892 MED20Q9H944 212 aa11.34□□□□□ -0.59
SMARCA4-210ENST00000586892 DECR2Q9NUI1 292 aa11.34□□□□□ -0.59
SMARCA4-210ENST00000586892 ENOPH1Q9UHY7 261 aa11.34□□□□□ -0.59
SMARCA4-210ENST00000586892 ZDHHC8Q9ULC8 765 aa11.34□□□□□ -0.59
SMARCA4-210ENST00000586892 LYNX1G3V0Z9 82 aa11.33□□□□□ -0.6
SMARCA4-210ENST00000586892 M0R135 149 aa11.33□□□□□ -0.6
SMARCA4-210ENST00000586892 CD5LO43866 347 aa11.33□□□□□ -0.6
SMARCA4-210ENST00000586892 IGHV1-46P01743 117 aa11.33□□□□□ -0.6
SMARCA4-210ENST00000586892 ACSM4P0C7M7 580 aa11.33□□□□□ -0.6
SMARCA4-210ENST00000586892 LYNX1P0DP58 116 aa11.33□□□□□ -0.6
SMARCA4-210ENST00000586892 PSKH1P11801 424 aa11.33□□□□□ -0.6
SMARCA4-210ENST00000586892 GSTT1P30711 240 aa11.33□□□□□ -0.6
SMARCA4-210ENST00000586892 OTX1P32242 354 aaPredicted RBP11.33□□□□□ -0.6
SMARCA4-210ENST00000586892 KPNB1Q14974 876 aaKnown RBP11.33□□□□□ -0.6
SMARCA4-210ENST00000586892 PTGES3Q15185 160 aaKnown RBP11.33□□□□□ -0.6
SMARCA4-210ENST00000586892 TMEM236Q5W0B7 351 aa11.33□□□□□ -0.6
SMARCA4-210ENST00000586892 ZFP1Q6P2D0 407 aa11.33□□□□□ -0.6
SMARCA4-210ENST00000586892 PLBD1Q6P4A8 553 aa11.33□□□□□ -0.6
SMARCA4-210ENST00000586892 ERI1Q8IV48 349 aaKnown RBP11.33□□□□□ -0.6
SMARCA4-210ENST00000586892 OR10S1Q8NGN2 331 aa11.33□□□□□ -0.6
SMARCA4-210ENST00000586892 PYDC1Q8WXC3 89 aa11.33□□□□□ -0.6
SMARCA4-210ENST00000586892 GTF3AQ92664 365 aaKnown RBP11.33□□□□□ -0.6
SMARCA4-210ENST00000586892 HAVCR1Q96D42 359 aa11.33□□□□□ -0.6
SMARCA4-210ENST00000586892 CMBLQ96DG6 245 aa11.33□□□□□ -0.6
SMARCA4-210ENST00000586892 ZNF799Q96GE5 643 aa11.33□□□□□ -0.6
SMARCA4-210ENST00000586892 INTS14Q96SY0 518 aa11.33□□□□□ -0.6
SMARCA4-210ENST00000586892 OR51V1Q9H2C8 321 aa11.33□□□□□ -0.6
SMARCA4-210ENST00000586892 MARCH7Q9H992 704 aa11.33□□□□□ -0.6
SMARCA4-210ENST00000586892 SAP30LQ9HAJ7 183 aa11.33□□□□□ -0.6
SMARCA4-210ENST00000586892 PURGQ9UJV8 347 aaKnown RBP11.33□□□□□ -0.6
SMARCA4-210ENST00000586892 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.33□□□□□ -0.6
SMARCA4-210ENST00000586892 ANK3Q12955 4377 aaKnown RBP11.32□□□□□ -0.6
SMARCA4-210ENST00000586892 IGHV4-61A0A0C4DH41 118 aa11.32□□□□□ -0.6
SMARCA4-210ENST00000586892 ZSCAN5BA6NJL1 495 aa11.32□□□□□ -0.6
SMARCA4-210ENST00000586892 ZNF878C9JN71 531 aa11.32□□□□□ -0.6
SMARCA4-210ENST00000586892 TPD52L2O43399 206 aaKnown RBP11.32□□□□□ -0.6
SMARCA4-210ENST00000586892 SPRY3O43610 288 aa11.32□□□□□ -0.6
SMARCA4-210ENST00000586892 TLX2O43763 284 aaPredicted RBP11.32□□□□□ -0.6
SMARCA4-210ENST00000586892 TACSTD2P09758 323 aa11.32□□□□□ -0.6
SMARCA4-210ENST00000586892 COL8A2P25067 703 aa11.32□□□□□ -0.6
SMARCA4-210ENST00000586892 CRYBB2P43320 205 aa11.32□□□□□ -0.6
SMARCA4-210ENST00000586892 SLC15A1P46059 708 aa11.32□□□□□ -0.6
SMARCA4-210ENST00000586892 TMEM33P57088 247 aa11.32□□□□□ -0.6
SMARCA4-210ENST00000586892 MALLQ13021 153 aa11.32□□□□□ -0.6
SMARCA4-210ENST00000586892 SNAPC1Q16533 368 aa11.32□□□□□ -0.6
SMARCA4-210ENST00000586892 TSTQ16762 297 aaKnown RBP11.32□□□□□ -0.6
SMARCA4-210ENST00000586892 SLC35D3Q5M8T2 416 aa11.32□□□□□ -0.6
SMARCA4-210ENST00000586892 DRAM2Q6UX65 266 aa11.32□□□□□ -0.6
SMARCA4-210ENST00000586892 SHFQ7M4L6 423 aa11.32□□□□□ -0.6
SMARCA4-210ENST00000586892 DPY19L4Q7Z388 723 aa11.32□□□□□ -0.6
SMARCA4-210ENST00000586892 CPOQ8IVL8 374 aa11.32□□□□□ -0.6
SMARCA4-210ENST00000586892 OR6N2Q8NGY6 317 aa11.32□□□□□ -0.6
SMARCA4-210ENST00000586892 ST7LQ8TDW4 575 aa11.32□□□□□ -0.6
SMARCA4-210ENST00000586892 SLAMF6Q96DU3 332 aa11.32□□□□□ -0.6
SMARCA4-210ENST00000586892 RAB3IPQ96QF0 476 aaPredicted RBP11.32□□□□□ -0.6
SMARCA4-210ENST00000586892 COPS4Q9BT78 406 aa11.32□□□□□ -0.6
SMARCA4-210ENST00000586892 OSBPL10Q9BXB5 764 aa11.32□□□□□ -0.6
SMARCA4-210ENST00000586892 EGLN1Q9GZT9 426 aa11.32□□□□□ -0.6
SMARCA4-210ENST00000586892 SEMA6AQ9H2E6 1030 aa11.32□□□□□ -0.6
SMARCA4-210ENST00000586892 MSL2Q9HCI7 577 aa11.32□□□□□ -0.6
SMARCA4-210ENST00000586892 TVP23BQ9NYZ1 205 aa11.32□□□□□ -0.6
SMARCA4-210ENST00000586892 PTTG3PQ9NZH4 202 aa11.32□□□□□ -0.6
SMARCA4-210ENST00000586892 OAZ3Q9UMX2 235 aa11.32□□□□□ -0.6
SMARCA4-210ENST00000586892 SVEP1Q4LDE5 3571 aa11.32□□□□□ -0.6
SMARCA4-210ENST00000586892 IGHV1-69-2A0A0G2JMI3 117 aa11.31□□□□□ -0.6
SMARCA4-210ENST00000586892 MITFO75030 526 aaPredicted RBP11.31□□□□□ -0.6
SMARCA4-210ENST00000586892 RP2O75695 350 aa11.31□□□□□ -0.6
SMARCA4-210ENST00000586892 LCATP04180 440 aa11.31□□□□□ -0.6
SMARCA4-210ENST00000586892 CD55P08174 381 aa11.31□□□□□ -0.6
SMARCA4-210ENST00000586892 TNFSF4P23510 183 aa11.31□□□□□ -0.6
SMARCA4-210ENST00000586892 IGFBP5P24593 272 aa11.31□□□□□ -0.6
SMARCA4-210ENST00000586892 SLC6A9P48067 706 aa11.31□□□□□ -0.6
SMARCA4-210ENST00000586892 GZMKP49863 264 aa11.31□□□□□ -0.6
SMARCA4-210ENST00000586892 CHN2P52757 468 aa11.31□□□□□ -0.6
SMARCA4-210ENST00000586892 PPP2R2BQ00005 443 aa11.31□□□□□ -0.6
SMARCA4-210ENST00000586892 CDK5R2Q13319 367 aa11.31□□□□□ -0.6
SMARCA4-210ENST00000586892 EIF2B1Q14232 305 aaKnown RBP11.31□□□□□ -0.6
SMARCA4-210ENST00000586892 HLXQ14774 488 aaPredicted RBP11.31□□□□□ -0.6
SMARCA4-210ENST00000586892 TAF13Q15543 124 aa11.31□□□□□ -0.6
SMARCA4-210ENST00000586892 KLHL12Q53G59 568 aa11.31□□□□□ -0.6
SMARCA4-210ENST00000586892 USP51Q70EK9 711 aa11.31□□□□□ -0.6
SMARCA4-210ENST00000586892 RHOUQ7L0Q8 258 aa11.31□□□□□ -0.6
SMARCA4-210ENST00000586892 CXXC5Q7LFL8 322 aaKnown RBP11.31□□□□□ -0.6
SMARCA4-210ENST00000586892 TIGD4Q8IY51 512 aa11.31□□□□□ -0.6
SMARCA4-210ENST00000586892 YIPF5Q969M3 257 aa11.31□□□□□ -0.6
SMARCA4-210ENST00000586892 ZMYND19Q96E35 227 aaPredicted RBP11.31□□□□□ -0.6
SMARCA4-210ENST00000586892 ELMOD3Q96FG2 381 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms