RNA–Protein interactions for RNA: ENST00000583988.1

PPP4R1-227, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 3

Gene PPP4R1, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-227ENST00000583988 C1orf185Q5T7R7 199 aa2.16□□□□□ -2.06
PPP4R1-227ENST00000583988 ADNP2Q6IQ32 1131 aa2.16□□□□□ -2.06
PPP4R1-227ENST00000583988 MBOAT1Q6ZNC8 495 aa2.16□□□□□ -2.06
PPP4R1-227ENST00000583988 TTC29Q8NA56 475 aaPredicted RBP2.16□□□□□ -2.06
PPP4R1-227ENST00000583988 C11orf72Q8NBR9 251 aa2.16□□□□□ -2.06
PPP4R1-227ENST00000583988 OR6N1Q8NGY5 312 aa2.16□□□□□ -2.06
PPP4R1-227ENST00000583988 LINC01560Q8TB33 94 aa2.16□□□□□ -2.06
PPP4R1-227ENST00000583988 MYCBPQ99417 103 aaPredicted RBP2.16□□□□□ -2.06
PPP4R1-227ENST00000583988 ZNF2Q9BSG1 426 aaPredicted RBP2.16□□□□□ -2.06
PPP4R1-227ENST00000583988 OR52D1Q9H346 318 aa2.16□□□□□ -2.06
PPP4R1-227ENST00000583988 GEMIN7Q9H840 131 aaKnown RBP2.16□□□□□ -2.06
PPP4R1-227ENST00000583988 A0A0J9YXV3 536 aa2.15□□□□□ -2.07
PPP4R1-227ENST00000583988 CENPVL3A0A0U1RRI6 287 aa2.15□□□□□ -2.07
PPP4R1-227ENST00000583988 TAAR5O14804 337 aa2.15□□□□□ -2.07
PPP4R1-227ENST00000583988 LSM1O15116 133 aaKnown RBP2.15□□□□□ -2.07
PPP4R1-227ENST00000583988 CCNKO75909 580 aa2.15□□□□□ -2.07
PPP4R1-227ENST00000583988 FLOT1O75955 427 aa2.15□□□□□ -2.07
PPP4R1-227ENST00000583988 LSM8O95777 96 aaKnown RBP2.15□□□□□ -2.07
PPP4R1-227ENST00000583988 OR8U9P0C7N5 309 aa2.15□□□□□ -2.07
PPP4R1-227ENST00000583988 BCKDHBP21953 392 aa2.15□□□□□ -2.07
PPP4R1-227ENST00000583988 RBM34P42696 430 aaKnown RBP2.15□□□□□ -2.07
PPP4R1-227ENST00000583988 UQCRFS1P47985 274 aa2.15□□□□□ -2.07
PPP4R1-227ENST00000583988 CACNG7P62955 275 aa2.15□□□□□ -2.07
PPP4R1-227ENST00000583988 TGM3Q08188 693 aa2.15□□□□□ -2.07
PPP4R1-227ENST00000583988 CDC20Q12834 499 aa2.15□□□□□ -2.07
PPP4R1-227ENST00000583988 KRTAP13-2Q52LG2 175 aa2.15□□□□□ -2.07
PPP4R1-227ENST00000583988 BEX5Q5H9J7 111 aa2.15□□□□□ -2.07
PPP4R1-227ENST00000583988 TPTE2P1Q5T6R2 138 aa2.15□□□□□ -2.07
PPP4R1-227ENST00000583988 ZFP1Q6P2D0 407 aa2.15□□□□□ -2.07
PPP4R1-227ENST00000583988 SLC25A34Q6PIV7 304 aa2.15□□□□□ -2.07
PPP4R1-227ENST00000583988 MRPL55Q7Z7F7 128 aaKnown RBP2.15□□□□□ -2.07
PPP4R1-227ENST00000583988 LGI3Q8N145 548 aa2.15□□□□□ -2.07
PPP4R1-227ENST00000583988 OR11H7Q8NGC8 314 aa2.15□□□□□ -2.07
PPP4R1-227ENST00000583988 OR10AD1Q8NGE0 317 aa2.15□□□□□ -2.07
PPP4R1-227ENST00000583988 OR9G4Q8NGQ1 327 aa2.15□□□□□ -2.07
PPP4R1-227ENST00000583988 NUBPLQ8TB37 319 aa2.15□□□□□ -2.07
PPP4R1-227ENST00000583988 APH1BQ8WW43 257 aa2.15□□□□□ -2.07
PPP4R1-227ENST00000583988 RTN4IP1Q8WWV3 396 aaPredicted RBP2.15□□□□□ -2.07
PPP4R1-227ENST00000583988 SLC25A46Q96AG3 418 aa2.15□□□□□ -2.07
PPP4R1-227ENST00000583988 BTN2A3PQ96KV6 586 aa2.15□□□□□ -2.07
PPP4R1-227ENST00000583988 CTRCQ99895 268 aa2.15□□□□□ -2.07
PPP4R1-227ENST00000583988 RSG1Q9BU20 258 aa2.15□□□□□ -2.07
PPP4R1-227ENST00000583988 EXO5Q9H790 373 aa2.15□□□□□ -2.07
PPP4R1-227ENST00000583988 C20orf96Q9NUD7 363 aaPredicted RBP2.15□□□□□ -2.07
PPP4R1-227ENST00000583988 MARCOQ9UEW3 520 aaPredicted RBP2.15□□□□□ -2.07
PPP4R1-227ENST00000583988 S4R3C0 116 aa2.15□□□□□ -2.07
PPP4R1-227ENST00000583988 PCM1Q15154 2024 aa2.15□□□□□ -2.07
PPP4R1-227ENST00000583988 TRAV19A0A0A6YYK7 116 aa2.14□□□□□ -2.07
PPP4R1-227ENST00000583988 H0YJW9 148 aa2.14□□□□□ -2.07
PPP4R1-227ENST00000583988 RPL36A-HNRNPH2H7BZ11 118 aa2.14□□□□□ -2.07
PPP4R1-227ENST00000583988 CHST10O43529 356 aa2.14□□□□□ -2.07
PPP4R1-227ENST00000583988 CHMP2AO43633 222 aa2.14□□□□□ -2.07
PPP4R1-227ENST00000583988 HBE1P02100 147 aa2.14□□□□□ -2.07
PPP4R1-227ENST00000583988 IL4P05112 153 aa2.14□□□□□ -2.07
PPP4R1-227ENST00000583988 EIF4EP06730 217 aaKnown RBP2.14□□□□□ -2.07
PPP4R1-227ENST00000583988 DCNP07585 359 aaKnown RBP2.14□□□□□ -2.07
PPP4R1-227ENST00000583988 CELP19835 753 aa2.14□□□□□ -2.07
PPP4R1-227ENST00000583988 HTR1DP28221 377 aa2.14□□□□□ -2.07
PPP4R1-227ENST00000583988 HMOX2P30519 316 aa2.14□□□□□ -2.07
PPP4R1-227ENST00000583988 OR1E1P30953 314 aa2.14□□□□□ -2.07
PPP4R1-227ENST00000583988 SLC11A1P49279 550 aa2.14□□□□□ -2.07
PPP4R1-227ENST00000583988 CDKN2DP55273 166 aa2.14□□□□□ -2.07
PPP4R1-227ENST00000583988 RPS23P62266 143 aaKnown RBP2.14□□□□□ -2.07
PPP4R1-227ENST00000583988 BEX3Q00994 111 aa2.14□□□□□ -2.07
PPP4R1-227ENST00000583988 ART3Q13508 389 aa2.14□□□□□ -2.07
PPP4R1-227ENST00000583988 RCAN2Q14206 197 aa2.14□□□□□ -2.07
PPP4R1-227ENST00000583988 NCF4Q15080 339 aa2.14□□□□□ -2.07
PPP4R1-227ENST00000583988 MPV17L2Q567V2 206 aa2.14□□□□□ -2.07
PPP4R1-227ENST00000583988 TMEM220Q6QAJ8 160 aa2.14□□□□□ -2.07
PPP4R1-227ENST00000583988 UNQ9165/PRO28630Q6UXU0 137 aa2.14□□□□□ -2.07
PPP4R1-227ENST00000583988 WDFY1Q8IWB7 410 aa2.14□□□□□ -2.07
PPP4R1-227ENST00000583988 JAGN1Q8N5M9 183 aa2.14□□□□□ -2.07
PPP4R1-227ENST00000583988 ECHDC3Q96DC8 303 aa2.14□□□□□ -2.07
PPP4R1-227ENST00000583988 TBL1YQ9BQ87 522 aa2.14□□□□□ -2.07
PPP4R1-227ENST00000583988 SULT4A1Q9BR01 284 aa2.14□□□□□ -2.07
PPP4R1-227ENST00000583988 ACTR3CQ9C0K3 210 aaPredicted RBP2.14□□□□□ -2.07
PPP4R1-227ENST00000583988 TOLLIPQ9H0E2 274 aa2.14□□□□□ -2.07
PPP4R1-227ENST00000583988 AUNIPQ9H7T9 357 aa2.14□□□□□ -2.07
PPP4R1-227ENST00000583988 MRM3Q9HC36 420 aaKnown RBP2.14□□□□□ -2.07
PPP4R1-227ENST00000583988 CLN6Q9NWW5 311 aa2.14□□□□□ -2.07
PPP4R1-227ENST00000583988 SIGLEC1Q9BZZ2 1709 aa2.14□□□□□ -2.07
PPP4R1-227ENST00000583988 IGHV7-4-1A0A0J9YVY3 117 aa2.13□□□□□ -2.07
PPP4R1-227ENST00000583988 OR2AG2A6NM03 316 aa2.13□□□□□ -2.07
PPP4R1-227ENST00000583988 NCBP2LA6PVI3 153 aaKnown RBP2.13□□□□□ -2.07
PPP4R1-227ENST00000583988 H7C417 338 aa2.13□□□□□ -2.07
PPP4R1-227ENST00000583988 M0R3G1 203 aa2.13□□□□□ -2.07
PPP4R1-227ENST00000583988 TNFRSF11BO00300 401 aa2.13□□□□□ -2.07
PPP4R1-227ENST00000583988 RDH16O75452 317 aa2.13□□□□□ -2.07
PPP4R1-227ENST00000583988 FOXH1O75593 365 aa2.13□□□□□ -2.07
PPP4R1-227ENST00000583988 CCNB2O95067 398 aa2.13□□□□□ -2.07
PPP4R1-227ENST00000583988 CD160O95971 181 aa2.13□□□□□ -2.07
PPP4R1-227ENST00000583988 ERCC1P07992 297 aaPredicted RBP2.13□□□□□ -2.07
PPP4R1-227ENST00000583988 CRISP1P54107 249 aa2.13□□□□□ -2.07
PPP4R1-227ENST00000583988 GFERP55789 205 aa2.13□□□□□ -2.07
PPP4R1-227ENST00000583988 IL18Q14116 193 aa2.13□□□□□ -2.07
PPP4R1-227ENST00000583988 PIGHQ14442 188 aaPredicted RBP2.13□□□□□ -2.07
PPP4R1-227ENST00000583988 FAM71AQ8IYT1 594 aa2.13□□□□□ -2.07
PPP4R1-227ENST00000583988 MYOCDQ8IZQ8 938 aa2.13□□□□□ -2.07
PPP4R1-227ENST00000583988 OSR2Q8N2R0 312 aa2.13□□□□□ -2.07
PPP4R1-227ENST00000583988 PQLC3Q8N755 202 aa2.13□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms