RNA–Protein interactions for RNA: ENST00000581708.5

CDK5RAP3-222, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 543 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-222ENST00000581708 CCL17Q92583 94 aa10.67□□□□□ -0.7
CDK5RAP3-222ENST00000581708 GTF3AQ92664 365 aaKnown RBP10.67□□□□□ -0.7
CDK5RAP3-222ENST00000581708 SPTSSAQ969W0 71 aa10.67□□□□□ -0.7
CDK5RAP3-222ENST00000581708 CCDC124Q96CT7 223 aaKnown RBP10.67□□□□□ -0.7
CDK5RAP3-222ENST00000581708 ZNF582Q96NG8 517 aaPredicted RBP10.67□□□□□ -0.7
CDK5RAP3-222ENST00000581708 RBM4Q9BWF3 364 aaKnown RBP10.67□□□□□ -0.7
CDK5RAP3-222ENST00000581708 TSSK6Q9BXA6 273 aa10.67□□□□□ -0.7
CDK5RAP3-222ENST00000581708 PLA2G12AQ9BZM1 189 aa10.67□□□□□ -0.7
CDK5RAP3-222ENST00000581708 NMNAT2Q9BZQ4 307 aa10.67□□□□□ -0.7
CDK5RAP3-222ENST00000581708 MSL2Q9HCI7 577 aa10.67□□□□□ -0.7
CDK5RAP3-222ENST00000581708 DDX28Q9NUL7 540 aaKnown RBP10.67□□□□□ -0.7
CDK5RAP3-222ENST00000581708 TREM2Q9NZC2 230 aa10.67□□□□□ -0.7
CDK5RAP3-222ENST00000581708 NOP16Q9Y3C1 178 aaKnown RBP10.67□□□□□ -0.7
CDK5RAP3-222ENST00000581708 PPIAL4EA0A075B759 164 aa10.66□□□□□ -0.7
CDK5RAP3-222ENST00000581708 PPIAL4CA0A0B4J2A2 164 aa10.66□□□□□ -0.7
CDK5RAP3-222ENST00000581708 RIIAD1A6NNX1 92 aa10.66□□□□□ -0.7
CDK5RAP3-222ENST00000581708 IQCF6A8MYZ5 107 aa10.66□□□□□ -0.7
CDK5RAP3-222ENST00000581708 PPIAL4DF5H284 164 aa10.66□□□□□ -0.7
CDK5RAP3-222ENST00000581708 J3QLI3 93 aa10.66□□□□□ -0.7
CDK5RAP3-222ENST00000581708 FSTL3O95633 263 aa10.66□□□□□ -0.7
CDK5RAP3-222ENST00000581708 GPANK1O95872 356 aa10.66□□□□□ -0.7
CDK5RAP3-222ENST00000581708 IGHV2-5P01817 119 aa10.66□□□□□ -0.7
CDK5RAP3-222ENST00000581708 DBHP09172 617 aa10.66□□□□□ -0.7
CDK5RAP3-222ENST00000581708 ACSM4P0C7M7 580 aa10.66□□□□□ -0.7
CDK5RAP3-222ENST00000581708 PPIAL4FP0DN26 164 aa10.66□□□□□ -0.7
CDK5RAP3-222ENST00000581708 OTX1P32242 354 aaPredicted RBP10.66□□□□□ -0.7
CDK5RAP3-222ENST00000581708 MVKQ03426 396 aa10.66□□□□□ -0.7
CDK5RAP3-222ENST00000581708 CORO6Q6QEF8 472 aa10.66□□□□□ -0.7
CDK5RAP3-222ENST00000581708 CFAP77Q6ZQR2 320 aa10.66□□□□□ -0.7
CDK5RAP3-222ENST00000581708 RHOUQ7L0Q8 258 aa10.66□□□□□ -0.7
CDK5RAP3-222ENST00000581708 RFLNBQ8N5W9 214 aa10.66□□□□□ -0.7
CDK5RAP3-222ENST00000581708 ZNF283Q8N7M2 679 aa10.66□□□□□ -0.7
CDK5RAP3-222ENST00000581708 SLC37A3Q8NCC5 494 aa10.66□□□□□ -0.7
CDK5RAP3-222ENST00000581708 OR2Z1Q8NG97 314 aa10.66□□□□□ -0.7
CDK5RAP3-222ENST00000581708 OR8D4Q8NGM9 314 aa10.66□□□□□ -0.7
CDK5RAP3-222ENST00000581708 TEX47Q8TBZ9 253 aa10.66□□□□□ -0.7
CDK5RAP3-222ENST00000581708 CANT1Q8WVQ1 401 aa10.66□□□□□ -0.7
CDK5RAP3-222ENST00000581708 MDFIQ99750 246 aa10.66□□□□□ -0.7
CDK5RAP3-222ENST00000581708 SLC22A4Q9H015 551 aa10.66□□□□□ -0.7
CDK5RAP3-222ENST00000581708 POFUT1Q9H488 388 aa10.66□□□□□ -0.7
CDK5RAP3-222ENST00000581708 OPA3Q9H6K4 179 aa10.66□□□□□ -0.7
CDK5RAP3-222ENST00000581708 PNRC2Q9NPJ4 139 aaKnown RBP10.66□□□□□ -0.7
CDK5RAP3-222ENST00000581708 CMC2Q9NRP2 79 aa10.66□□□□□ -0.7
CDK5RAP3-222ENST00000581708 HIF1ANQ9NWT6 349 aa10.66□□□□□ -0.7
CDK5RAP3-222ENST00000581708 MRPL22Q9NWU5 206 aaKnown RBP10.66□□□□□ -0.7
CDK5RAP3-222ENST00000581708 VNN3Q9NY84 501 aa10.66□□□□□ -0.7
CDK5RAP3-222ENST00000581708 U3KQV3 271 aa10.66□□□□□ -0.7
CDK5RAP3-222ENST00000581708 A0A0A6YYJ9 748 aa10.65□□□□□ -0.7
CDK5RAP3-222ENST00000581708 FAM157AC9JC47 383 aa10.65□□□□□ -0.7
CDK5RAP3-222ENST00000581708 GNGT2O14610 69 aa10.65□□□□□ -0.7
CDK5RAP3-222ENST00000581708 WNT9BO14905 357 aa10.65□□□□□ -0.7
CDK5RAP3-222ENST00000581708 DEAF1O75398 565 aaPredicted RBP10.65□□□□□ -0.7
CDK5RAP3-222ENST00000581708 ZNF3P17036 446 aa10.65□□□□□ -0.7
CDK5RAP3-222ENST00000581708 GRK5P34947 590 aa10.65□□□□□ -0.7
CDK5RAP3-222ENST00000581708 SRP14P37108 136 aaKnown RBP10.65□□□□□ -0.7
CDK5RAP3-222ENST00000581708 SRP9P49458 86 aaKnown RBP10.65□□□□□ -0.7
CDK5RAP3-222ENST00000581708 RASSF2P50749 326 aa10.65□□□□□ -0.7
CDK5RAP3-222ENST00000581708 FLOT2Q14254 428 aa10.65□□□□□ -0.7
CDK5RAP3-222ENST00000581708 TMEM155Q4W5P6 130 aa10.65□□□□□ -0.7
CDK5RAP3-222ENST00000581708 DRAM2Q6UX65 266 aa10.65□□□□□ -0.7
CDK5RAP3-222ENST00000581708 Q6ZR03 302 aa10.65□□□□□ -0.7
CDK5RAP3-222ENST00000581708 ZSCAN2Q7Z7L9 614 aaPredicted RBP10.65□□□□□ -0.7
CDK5RAP3-222ENST00000581708 SPICQ8N5J4 248 aa10.65□□□□□ -0.7
CDK5RAP3-222ENST00000581708 CELF2-AS1Q8N7Q2 184 aa10.65□□□□□ -0.7
CDK5RAP3-222ENST00000581708 CYB561A3Q8NBI2 242 aa10.65□□□□□ -0.7
CDK5RAP3-222ENST00000581708 PAPD5Q8NDF8 572 aaKnown RBP10.65□□□□□ -0.7
CDK5RAP3-222ENST00000581708 DNAJC9Q8WXX5 260 aa10.65□□□□□ -0.7
CDK5RAP3-222ENST00000581708 CLPTM1LQ96KA5 538 aa10.65□□□□□ -0.7
CDK5RAP3-222ENST00000581708 FEVQ99581 238 aa10.65□□□□□ -0.7
CDK5RAP3-222ENST00000581708 SLC30A2Q9BRI3 323 aa10.65□□□□□ -0.7
CDK5RAP3-222ENST00000581708 FN3KQ9H479 309 aa10.65□□□□□ -0.7
CDK5RAP3-222ENST00000581708 NARFLQ9H6Q4 476 aa10.65□□□□□ -0.7
CDK5RAP3-222ENST00000581708 ZNF556Q9HAH1 456 aa10.65□□□□□ -0.7
CDK5RAP3-222ENST00000581708 TMEM106BQ9NUM4 274 aa10.65□□□□□ -0.7
CDK5RAP3-222ENST00000581708 PTTG3PQ9NZH4 202 aa10.65□□□□□ -0.7
CDK5RAP3-222ENST00000581708 PPP1R3CQ9UQK1 317 aa10.65□□□□□ -0.7
CDK5RAP3-222ENST00000581708 NPTNQ9Y639 398 aa10.65□□□□□ -0.7
CDK5RAP3-222ENST00000581708 CACNG2Q9Y698 323 aa10.65□□□□□ -0.7
CDK5RAP3-222ENST00000581708 RNF212BA8MTL3 300 aa10.64□□□□□ -0.71
CDK5RAP3-222ENST00000581708 F5H5K5 113 aa10.64□□□□□ -0.71
CDK5RAP3-222ENST00000581708 M0R135 149 aa10.64□□□□□ -0.71
CDK5RAP3-222ENST00000581708 PHF1O43189 567 aaPredicted RBP10.64□□□□□ -0.71
CDK5RAP3-222ENST00000581708 DNAJC8O75937 253 aaPredicted RBP10.64□□□□□ -0.71
CDK5RAP3-222ENST00000581708 PNPP00491 289 aa10.64□□□□□ -0.71
CDK5RAP3-222ENST00000581708 APOC1P02654 83 aa10.64□□□□□ -0.71
CDK5RAP3-222ENST00000581708 HMGN1P05114 100 aa10.64□□□□□ -0.71
CDK5RAP3-222ENST00000581708 ANXA8P13928 327 aa10.64□□□□□ -0.71
CDK5RAP3-222ENST00000581708 SPI1P17947 270 aa10.64□□□□□ -0.71
CDK5RAP3-222ENST00000581708 PAICSP22234 425 aaKnown RBP10.64□□□□□ -0.71
CDK5RAP3-222ENST00000581708 SLC15A1P46059 708 aa10.64□□□□□ -0.71
CDK5RAP3-222ENST00000581708 ENTPD1P49961 510 aa10.64□□□□□ -0.71
CDK5RAP3-222ENST00000581708 CRMP1Q14194 572 aa10.64□□□□□ -0.71
CDK5RAP3-222ENST00000581708 ZNF181Q2M3W8 571 aa10.64□□□□□ -0.71
CDK5RAP3-222ENST00000581708 AVPI1Q5T686 147 aa10.64□□□□□ -0.71
CDK5RAP3-222ENST00000581708 LIPNQ5VXI9 398 aa10.64□□□□□ -0.71
CDK5RAP3-222ENST00000581708 OTPQ5XKR4 325 aa10.64□□□□□ -0.71
CDK5RAP3-222ENST00000581708 LINC00346Q8IVM7 164 aa10.64□□□□□ -0.71
CDK5RAP3-222ENST00000581708 MUC20Q8N307 709 aaPredicted RBP10.64□□□□□ -0.71
CDK5RAP3-222ENST00000581708 OR4Q3Q8NH05 313 aa10.64□□□□□ -0.71
CDK5RAP3-222ENST00000581708 ERGIC1Q969X5 290 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms