RNA–Protein interactions for RNA: ENST00000578904.1

CSNK1D-209, Transcript of casein kinase 1 delta, humanhuman

TSL 3

Gene CSNK1D, Length 1,269 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-209ENST00000578904 TBRG1Q3YBR2 411 aa12.17□□□□□ -0.46
CSNK1D-209ENST00000578904 OTPQ5XKR4 325 aa12.17□□□□□ -0.46
CSNK1D-209ENST00000578904 DMKNQ6E0U4 476 aaPredicted RBP12.17□□□□□ -0.46
CSNK1D-209ENST00000578904 ZNF474Q6S9Z5 364 aaPredicted RBP12.17□□□□□ -0.46
CSNK1D-209ENST00000578904 CLEC18BQ6UXF7 455 aa12.17□□□□□ -0.46
CSNK1D-209ENST00000578904 ZNF704Q6ZNC4 412 aaPredicted RBP12.17□□□□□ -0.46
CSNK1D-209ENST00000578904 GABRG1Q8N1C3 465 aa12.17□□□□□ -0.46
CSNK1D-209ENST00000578904 ZNF283Q8N7M2 679 aa12.17□□□□□ -0.46
CSNK1D-209ENST00000578904 ZNF676Q8N7Q3 588 aa12.17□□□□□ -0.46
CSNK1D-209ENST00000578904 CLEC18CQ8NCF0 446 aa12.17□□□□□ -0.46
CSNK1D-209ENST00000578904 OR2G2Q8NGZ5 317 aa12.17□□□□□ -0.46
CSNK1D-209ENST00000578904 OR5AK2Q8NH90 309 aa12.17□□□□□ -0.46
CSNK1D-209ENST00000578904 OR1F12Q8NHA8 337 aa12.17□□□□□ -0.46
CSNK1D-209ENST00000578904 AMELYQ99218 206 aa12.17□□□□□ -0.46
CSNK1D-209ENST00000578904 OR2H1Q9GZK4 316 aa12.17□□□□□ -0.46
CSNK1D-209ENST00000578904 EXOSC4Q9NPD3 245 aaKnown RBP12.17□□□□□ -0.46
CSNK1D-209ENST00000578904 JKAMPQ9P055 326 aa12.17□□□□□ -0.46
CSNK1D-209ENST00000578904 GTF2A1LQ9UNN4 478 aa12.17□□□□□ -0.46
CSNK1D-209ENST00000578904 ZNF281Q9Y2X9 895 aa12.17□□□□□ -0.46
CSNK1D-209ENST00000578904 AMDHD2Q9Y303 409 aa12.17□□□□□ -0.46
CSNK1D-209ENST00000578904 CEPT1Q9Y6K0 416 aa12.17□□□□□ -0.46
CSNK1D-209ENST00000578904 PNMA8CA0A1B0GUJ8 204 aa12.16□□□□□ -0.46
CSNK1D-209ENST00000578904 MAGEB4O15481 346 aaPredicted RBP12.16□□□□□ -0.46
CSNK1D-209ENST00000578904 RAD51DO75771 328 aa12.16□□□□□ -0.46
CSNK1D-209ENST00000578904 RGS9O75916 674 aaPredicted RBP12.16□□□□□ -0.46
CSNK1D-209ENST00000578904 GABARAPO95166 117 aa12.16□□□□□ -0.46
CSNK1D-209ENST00000578904 UBCP0CG48 685 aaKnown RBP12.16□□□□□ -0.46
CSNK1D-209ENST00000578904 MAPK3P27361 379 aaPredicted RBP12.16□□□□□ -0.46
CSNK1D-209ENST00000578904 PSMB10P40306 273 aa12.16□□□□□ -0.46
CSNK1D-209ENST00000578904 HTR5AP47898 357 aa12.16□□□□□ -0.46
CSNK1D-209ENST00000578904 GTF2A1P52655 376 aaPredicted RBP12.16□□□□□ -0.46
CSNK1D-209ENST00000578904 PSMA6P60900 246 aaKnown RBP12.16□□□□□ -0.46
CSNK1D-209ENST00000578904 RAB1AP62820 205 aa12.16□□□□□ -0.46
CSNK1D-209ENST00000578904 SSX1Q16384 188 aa12.16□□□□□ -0.46
CSNK1D-209ENST00000578904 GSG1Q2KHT4 349 aa12.16□□□□□ -0.46
CSNK1D-209ENST00000578904 CCDC92Q53HC0 331 aaPredicted RBP12.16□□□□□ -0.46
CSNK1D-209ENST00000578904 YIF1BQ5BJH7 314 aa12.16□□□□□ -0.46
CSNK1D-209ENST00000578904 SFRP5Q5T4F7 317 aa12.16□□□□□ -0.46
CSNK1D-209ENST00000578904 BCL2L15Q5TBC7 163 aa12.16□□□□□ -0.46
CSNK1D-209ENST00000578904 TMEM244Q5VVB8 128 aa12.16□□□□□ -0.46
CSNK1D-209ENST00000578904 DRAM2Q6UX65 266 aa12.16□□□□□ -0.46
CSNK1D-209ENST00000578904 BHLHA15Q7RTS1 189 aaPredicted RBP12.16□□□□□ -0.46
CSNK1D-209ENST00000578904 ZFP41Q8N8Y5 198 aa12.16□□□□□ -0.46
CSNK1D-209ENST00000578904 STEAP2Q8NFT2 490 aa12.16□□□□□ -0.46
CSNK1D-209ENST00000578904 OR1J2Q8NGS2 313 aa12.16□□□□□ -0.46
CSNK1D-209ENST00000578904 PHYHIPQ92561 330 aa12.16□□□□□ -0.46
CSNK1D-209ENST00000578904 ISOC1Q96CN7 298 aa12.16□□□□□ -0.46
CSNK1D-209ENST00000578904 DCLRE1CQ96SD1 692 aaKnown RBP12.16□□□□□ -0.46
CSNK1D-209ENST00000578904 ST6GALNAC2Q9UJ37 374 aa12.16□□□□□ -0.46
CSNK1D-209ENST00000578904 LOC100506127A0A0U1RQW1 187 aa12.15□□□□□ -0.46
CSNK1D-209ENST00000578904 TRDV1A0A1B0GX56 115 aa12.15□□□□□ -0.46
CSNK1D-209ENST00000578904 E9PI62 339 aa12.15□□□□□ -0.46
CSNK1D-209ENST00000578904 SYNGR3O43761 229 aa12.15□□□□□ -0.46
CSNK1D-209ENST00000578904 GATBO75879 557 aaKnown RBP12.15□□□□□ -0.46
CSNK1D-209ENST00000578904 LYZL6O75951 148 aa12.15□□□□□ -0.46
CSNK1D-209ENST00000578904 LALBAP00709 142 aa12.15□□□□□ -0.46
CSNK1D-209ENST00000578904 MMP7P09237 267 aaPredicted RBP12.15□□□□□ -0.46
CSNK1D-209ENST00000578904 PSKH1P11801 424 aa12.15□□□□□ -0.46
CSNK1D-209ENST00000578904 ZNF12P17014 697 aa12.15□□□□□ -0.46
CSNK1D-209ENST00000578904 PSMB1P20618 241 aaKnown RBP12.15□□□□□ -0.46
CSNK1D-209ENST00000578904 GADD45AP24522 165 aa12.15□□□□□ -0.46
CSNK1D-209ENST00000578904 APLNRP35414 380 aa12.15□□□□□ -0.46
CSNK1D-209ENST00000578904 TGFBR2P37173 567 aa12.15□□□□□ -0.46
CSNK1D-209ENST00000578904 SLC6A9P48067 706 aa12.15□□□□□ -0.46
CSNK1D-209ENST00000578904 CX3CR1P49238 355 aa12.15□□□□□ -0.46
CSNK1D-209ENST00000578904 PSG4Q00888 419 aa12.15□□□□□ -0.46
CSNK1D-209ENST00000578904 GALK2Q01415 458 aa12.15□□□□□ -0.46
CSNK1D-209ENST00000578904 GABRA6Q16445 453 aa12.15□□□□□ -0.46
CSNK1D-209ENST00000578904 FBXL19-AS1Q494R0 122 aa12.15□□□□□ -0.46
CSNK1D-209ENST00000578904 PABPC1L2AQ5JQF8 200 aa12.15□□□□□ -0.46
CSNK1D-209ENST00000578904 UNQ6126/PRO20091Q6UXV3 157 aa12.15□□□□□ -0.46
CSNK1D-209ENST00000578904 CXorf67Q86X51 503 aaPredicted RBP12.15□□□□□ -0.46
CSNK1D-209ENST00000578904 CCDC54Q8NEL0 328 aa12.15□□□□□ -0.46
CSNK1D-209ENST00000578904 KBTBD8Q8NFY9 601 aa12.15□□□□□ -0.46
CSNK1D-209ENST00000578904 OR52H1Q8NGJ2 320 aa12.15□□□□□ -0.46
CSNK1D-209ENST00000578904 RPS4Y2Q8TD47 263 aa12.15□□□□□ -0.46
CSNK1D-209ENST00000578904 HTRA1Q92743 480 aa12.15□□□□□ -0.46
CSNK1D-209ENST00000578904 GHSRQ92847 366 aa12.15□□□□□ -0.46
CSNK1D-209ENST00000578904 RNASE6Q93091 150 aaKnown RBP12.15□□□□□ -0.46
CSNK1D-209ENST00000578904 MUCL1Q96DR8 90 aa12.15□□□□□ -0.46
CSNK1D-209ENST00000578904 CHCHD6Q9BRQ6 235 aa12.15□□□□□ -0.46
CSNK1D-209ENST00000578904 TMED9Q9BVK6 235 aa12.15□□□□□ -0.46
CSNK1D-209ENST00000578904 RBM38Q9H0Z9 239 aaKnown RBP12.15□□□□□ -0.46
CSNK1D-209ENST00000578904 OR10A4Q9H209 315 aa12.15□□□□□ -0.46
CSNK1D-209ENST00000578904 HEATR1Q9H583 2144 aaKnown RBP12.15□□□□□ -0.46
CSNK1D-209ENST00000578904 PNRC2Q9NPJ4 139 aaKnown RBP12.15□□□□□ -0.46
CSNK1D-209ENST00000578904 OR52A1Q9UKL2 312 aa12.15□□□□□ -0.46
CSNK1D-209ENST00000578904 USP9XQ93008 2570 aaPredicted RBP12.14□□□□□ -0.47
CSNK1D-209ENST00000578904 PRR32B1ATL7 298 aa12.14□□□□□ -0.47
CSNK1D-209ENST00000578904 F5H5K5 113 aa12.14□□□□□ -0.47
CSNK1D-209ENST00000578904 M0R135 149 aa12.14□□□□□ -0.47
CSNK1D-209ENST00000578904 ARL6IP5O75915 188 aa12.14□□□□□ -0.47
CSNK1D-209ENST00000578904 CD2P06729 351 aa12.14□□□□□ -0.47
CSNK1D-209ENST00000578904 ANXA2P07355 339 aaKnown RBP12.14□□□□□ -0.47
CSNK1D-209ENST00000578904 FGF9P31371 208 aaPredicted RBP12.14□□□□□ -0.47
CSNK1D-209ENST00000578904 PRKXP51817 358 aa12.14□□□□□ -0.47
CSNK1D-209ENST00000578904 ZNF774Q6NX45 483 aa12.14□□□□□ -0.47
CSNK1D-209ENST00000578904 CATSPERDQ86XM0 798 aa12.14□□□□□ -0.47
CSNK1D-209ENST00000578904 OR10S1Q8NGN2 331 aa12.14□□□□□ -0.47
CSNK1D-209ENST00000578904 GPR148Q8TDV2 347 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms